data_6PS6 # _model_server_result.job_id ylca3nsE2wUQ62cNMpG_ZQ _model_server_result.datetime_utc '2024-11-06 01:44:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ps6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1206}' # _entry.id 6PS6 # _exptl.entry_id 6PS6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PS6 _cell.length_a 41.48 _cell.length_b 76.19 _cell.length_c 171.96 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PS6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 130 A CYS 106 1_555 A SG CYS 215 A CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 208 A CYS 184 1_555 A SG CYS 214 A CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 6PS6 _atom_sites.fract_transf_matrix[1][1] 0.024108 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013125 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005815 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TIM A 1 1201 1200 TIM TIM . C 3 SO4 A 1 1202 1 SO4 SO4 . D 3 SO4 A 1 1203 2 SO4 SO4 . E 3 SO4 A 1 1204 3 SO4 SO4 . F 3 SO4 A 1 1205 4 SO4 SO4 . G 4 CLR A 1 1206 402 CLR CLR . H 5 OLC A 1 1207 439 OLC OLC . I 5 OLC A 1 1208 440 OLC OLC . J 5 OLC A 1 1209 441 OLC OLC . K 5 OLC A 1 1210 442 OLC OLC . L 5 OLC A 1 1211 443 OLC OLC . M 5 OLC A 1 1212 444 OLC OLC . N 5 OLC A 1 1213 445 OLC OLC . O 6 OLA A 1 1214 500 OLA OLA . P 6 OLA A 1 1215 503 OLA OLA . Q 6 OLA A 1 1216 504 OLA OLA . R 6 OLA A 1 1217 505 OLA OLA . S 7 HOH A 1 1301 4 HOH HOH . S 7 HOH A 2 1302 1 HOH HOH . S 7 HOH A 3 1303 9 HOH HOH . S 7 HOH A 4 1304 3 HOH HOH . S 7 HOH A 5 1305 8 HOH HOH . S 7 HOH A 6 1306 2 HOH HOH . S 7 HOH A 7 1307 10 HOH HOH . S 7 HOH A 8 1308 6 HOH HOH . S 7 HOH A 9 1309 7 HOH HOH . S 7 HOH A 10 1310 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . G 4 -11.399 9.934 30.333 1 114.72 ? C1 CLR 1206 A 1 HETATM 2 C C2 CLR . . . G 4 -11.145 9.83 28.817 1 114.65 ? C2 CLR 1206 A 1 HETATM 3 C C3 CLR . . . G 4 -9.657 9.849 28.455 1 114.48 ? C3 CLR 1206 A 1 HETATM 4 C C4 CLR . . . G 4 -8.951 8.696 29.165 1 114.14 ? C4 CLR 1206 A 1 HETATM 5 C C5 CLR . . . G 4 -9.163 8.839 30.665 1 114.1 ? C5 CLR 1206 A 1 HETATM 6 C C6 CLR . . . G 4 -8.05 8.821 31.433 1 113.7 ? C6 CLR 1206 A 1 HETATM 7 C C7 CLR . . . G 4 -8.012 9.443 32.815 1 113.57 ? C7 CLR 1206 A 1 HETATM 8 C C8 CLR . . . G 4 -9.328 9.157 33.545 1 113.87 ? C8 CLR 1206 A 1 HETATM 9 C C9 CLR . . . G 4 -10.5 9.668 32.666 1 114.43 ? C9 CLR 1206 A 1 HETATM 10 C C10 CLR . . . G 4 -10.579 9.002 31.257 1 114.46 ? C10 CLR 1206 A 1 HETATM 11 C C11 CLR . . . G 4 -11.844 9.623 33.446 1 114.74 ? C11 CLR 1206 A 1 HETATM 12 C C12 CLR . . . G 4 -11.799 10.174 34.89 1 114.45 ? C12 CLR 1206 A 1 HETATM 13 C C13 CLR . . . G 4 -10.666 9.588 35.757 1 113.56 ? C13 CLR 1206 A 1 HETATM 14 C C14 CLR . . . G 4 -9.389 9.816 34.936 1 113.56 ? C14 CLR 1206 A 1 HETATM 15 C C15 CLR . . . G 4 -8.254 9.551 35.918 1 112.98 ? C15 CLR 1206 A 1 HETATM 16 C C16 CLR . . . G 4 -8.784 10.189 37.199 1 112.62 ? C16 CLR 1206 A 1 HETATM 17 C C17 CLR . . . G 4 -10.297 10.426 37.014 1 112.84 ? C17 CLR 1206 A 1 HETATM 18 C C18 CLR . . . G 4 -10.969 8.101 36.082 1 112.95 ? C18 CLR 1206 A 1 HETATM 19 C C19 CLR . . . G 4 -11.247 7.615 31.295 1 114.39 ? C19 CLR 1206 A 1 HETATM 20 C C20 CLR . . . G 4 -11.119 10.255 38.321 1 112.26 ? C20 CLR 1206 A 1 HETATM 21 C C21 CLR . . . G 4 -12.566 10.747 38.209 1 112.76 ? C21 CLR 1206 A 1 HETATM 22 C C22 CLR . . . G 4 -10.488 10.983 39.515 1 110.64 ? C22 CLR 1206 A 1 HETATM 23 C C23 CLR . . . G 4 -10.403 10.133 40.78 1 108.97 ? C23 CLR 1206 A 1 HETATM 24 C C24 CLR . . . G 4 -10.162 11.037 41.985 1 107.83 ? C24 CLR 1206 A 1 HETATM 25 C C25 CLR . . . G 4 -10.804 10.509 43.264 1 106.46 ? C25 CLR 1206 A 1 HETATM 26 C C26 CLR . . . G 4 -9.902 10.788 44.461 1 105.87 ? C26 CLR 1206 A 1 HETATM 27 C C27 CLR . . . G 4 -12.182 11.123 43.491 1 106.19 ? C27 CLR 1206 A 1 HETATM 28 O O1 CLR . . . G 4 -9.481 9.74 27.038 1 114.64 ? O1 CLR 1206 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 28 #