data_6PSB # _model_server_result.job_id igK1-CJDinsFe_WxatfMIA _model_server_result.datetime_utc '2024-10-19 03:49:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6psb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6PSB # _exptl.entry_id 6PSB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 297.352 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 5-{[(3R)-1-methyl-5-oxopyrrolidin-3-yl]methyl}-2,3,4,5-tetrahydro-1H-pyrido[4,3-b]indol-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PSB _cell.length_a 42.614 _cell.length_b 52.008 _cell.length_c 58 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PSB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H19 N3 O2' _chem_comp.formula_weight 297.352 _chem_comp.id Y18 _chem_comp.mon_nstd_flag . _chem_comp.name 5-{[(3R)-1-methyl-5-oxopyrrolidin-3-yl]methyl}-2,3,4,5-tetrahydro-1H-pyrido[4,3-b]indol-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 N12 Y18 sing 376 n n O16 C14 Y18 doub 377 n n N12 C14 Y18 sing 378 n n N12 C11 Y18 sing 379 n n C14 C15 Y18 sing 380 n n C11 C10 Y18 sing 381 n n C10 C15 Y18 sing 382 n n C10 C09 Y18 sing 383 n n C09 N08 Y18 sing 384 n n N08 C17 Y18 sing 385 n y N08 C07 Y18 sing 386 n y C22 C17 Y18 doub 387 n y C22 C21 Y18 sing 388 n y C17 C18 Y18 sing 389 n y C05 C07 Y18 sing 390 n n C05 C04 Y18 sing 391 n n C07 C06 Y18 doub 392 n y C21 C20 Y18 doub 393 n y C04 N03 Y18 sing 394 n n C18 C06 Y18 sing 395 n y C18 C19 Y18 doub 396 n y C06 C02 Y18 sing 397 n n C20 C19 Y18 sing 398 n y N03 C02 Y18 sing 399 n n C02 O01 Y18 doub 400 n n C04 H1 Y18 sing 401 n n C04 H2 Y18 sing 402 n n C05 H3 Y18 sing 403 n n C05 H4 Y18 sing 404 n n C09 H5 Y18 sing 405 n n C09 H6 Y18 sing 406 n n C10 H7 Y18 sing 407 n n C11 H8 Y18 sing 408 n n C11 H9 Y18 sing 409 n n C13 H10 Y18 sing 410 n n C13 H11 Y18 sing 411 n n C13 H12 Y18 sing 412 n n C15 H13 Y18 sing 413 n n C15 H14 Y18 sing 414 n n C19 H15 Y18 sing 415 n n C20 H16 Y18 sing 416 n n C21 H17 Y18 sing 417 n n C22 H18 Y18 sing 418 n n N03 H19 Y18 sing 419 n n # _atom_sites.entry_id 6PSB _atom_sites.fract_transf_matrix[1][1] 0.023466 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019228 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017241 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Y18 A 1 201 201 Y18 18 . C 3 HOH A 1 301 49 HOH HOH . C 3 HOH A 2 302 93 HOH HOH . C 3 HOH A 3 303 126 HOH HOH . C 3 HOH A 4 304 114 HOH HOH . C 3 HOH A 5 305 121 HOH HOH . C 3 HOH A 6 306 98 HOH HOH . C 3 HOH A 7 307 46 HOH HOH . C 3 HOH A 8 308 59 HOH HOH . C 3 HOH A 9 309 213 HOH HOH . C 3 HOH A 10 310 149 HOH HOH . C 3 HOH A 11 311 165 HOH HOH . C 3 HOH A 12 312 226 HOH HOH . C 3 HOH A 13 313 63 HOH HOH . C 3 HOH A 14 314 82 HOH HOH . C 3 HOH A 15 315 118 HOH HOH . C 3 HOH A 16 316 141 HOH HOH . C 3 HOH A 17 317 66 HOH HOH . C 3 HOH A 18 318 148 HOH HOH . C 3 HOH A 19 319 232 HOH HOH . C 3 HOH A 20 320 210 HOH HOH . C 3 HOH A 21 321 6 HOH HOH . C 3 HOH A 22 322 58 HOH HOH . C 3 HOH A 23 323 13 HOH HOH . C 3 HOH A 24 324 107 HOH HOH . C 3 HOH A 25 325 170 HOH HOH . C 3 HOH A 26 326 68 HOH HOH . C 3 HOH A 27 327 7 HOH HOH . C 3 HOH A 28 328 64 HOH HOH . C 3 HOH A 29 329 69 HOH HOH . C 3 HOH A 30 330 95 HOH HOH . C 3 HOH A 31 331 84 HOH HOH . C 3 HOH A 32 332 140 HOH HOH . C 3 HOH A 33 333 38 HOH HOH . C 3 HOH A 34 334 94 HOH HOH . C 3 HOH A 35 335 92 HOH HOH . C 3 HOH A 36 336 61 HOH HOH . C 3 HOH A 37 337 208 HOH HOH . C 3 HOH A 38 338 11 HOH HOH . C 3 HOH A 39 339 137 HOH HOH . C 3 HOH A 40 340 105 HOH HOH . C 3 HOH A 41 341 25 HOH HOH . C 3 HOH A 42 342 205 HOH HOH . C 3 HOH A 43 343 99 HOH HOH . C 3 HOH A 44 344 10 HOH HOH . C 3 HOH A 45 345 45 HOH HOH . C 3 HOH A 46 346 182 HOH HOH . C 3 HOH A 47 347 218 HOH HOH . C 3 HOH A 48 348 102 HOH HOH . C 3 HOH A 49 349 181 HOH HOH . C 3 HOH A 50 350 96 HOH HOH . C 3 HOH A 51 351 53 HOH HOH . C 3 HOH A 52 352 44 HOH HOH . C 3 HOH A 53 353 21 HOH HOH . C 3 HOH A 54 354 19 HOH HOH . C 3 HOH A 55 355 145 HOH HOH . C 3 HOH A 56 356 5 HOH HOH . C 3 HOH A 57 357 71 HOH HOH . C 3 HOH A 58 358 17 HOH HOH . C 3 HOH A 59 359 183 HOH HOH . C 3 HOH A 60 360 43 HOH HOH . C 3 HOH A 61 361 3 HOH HOH . C 3 HOH A 62 362 35 HOH HOH . C 3 HOH A 63 363 2 HOH HOH . C 3 HOH A 64 364 160 HOH HOH . C 3 HOH A 65 365 73 HOH HOH . C 3 HOH A 66 366 39 HOH HOH . C 3 HOH A 67 367 193 HOH HOH . C 3 HOH A 68 368 31 HOH HOH . C 3 HOH A 69 369 37 HOH HOH . C 3 HOH A 70 370 8 HOH HOH . C 3 HOH A 71 371 200 HOH HOH . C 3 HOH A 72 372 20 HOH HOH . C 3 HOH A 73 373 9 HOH HOH . C 3 HOH A 74 374 34 HOH HOH . C 3 HOH A 75 375 4 HOH HOH . C 3 HOH A 76 376 47 HOH HOH . C 3 HOH A 77 377 146 HOH HOH . C 3 HOH A 78 378 88 HOH HOH . C 3 HOH A 79 379 108 HOH HOH . C 3 HOH A 80 380 18 HOH HOH . C 3 HOH A 81 381 57 HOH HOH . C 3 HOH A 82 382 12 HOH HOH . C 3 HOH A 83 383 22 HOH HOH . C 3 HOH A 84 384 186 HOH HOH . C 3 HOH A 85 385 54 HOH HOH . C 3 HOH A 86 386 70 HOH HOH . C 3 HOH A 87 387 162 HOH HOH . C 3 HOH A 88 388 134 HOH HOH . C 3 HOH A 89 389 55 HOH HOH . C 3 HOH A 90 390 52 HOH HOH . C 3 HOH A 91 391 15 HOH HOH . C 3 HOH A 92 392 32 HOH HOH . C 3 HOH A 93 393 120 HOH HOH . C 3 HOH A 94 394 30 HOH HOH . C 3 HOH A 95 395 157 HOH HOH . C 3 HOH A 96 396 81 HOH HOH . C 3 HOH A 97 397 14 HOH HOH . C 3 HOH A 98 398 41 HOH HOH . C 3 HOH A 99 399 152 HOH HOH . C 3 HOH A 100 400 72 HOH HOH . C 3 HOH A 101 401 206 HOH HOH . C 3 HOH A 102 402 16 HOH HOH . C 3 HOH A 103 403 1 HOH HOH . C 3 HOH A 104 404 100 HOH HOH . C 3 HOH A 105 405 26 HOH HOH . C 3 HOH A 106 406 91 HOH HOH . C 3 HOH A 107 407 27 HOH HOH . C 3 HOH A 108 408 138 HOH HOH . C 3 HOH A 109 409 163 HOH HOH . C 3 HOH A 110 410 147 HOH HOH . C 3 HOH A 111 411 28 HOH HOH . C 3 HOH A 112 412 23 HOH HOH . C 3 HOH A 113 413 29 HOH HOH . C 3 HOH A 114 414 195 HOH HOH . C 3 HOH A 115 415 144 HOH HOH . C 3 HOH A 116 416 236 HOH HOH . C 3 HOH A 117 417 40 HOH HOH . C 3 HOH A 118 418 106 HOH HOH . C 3 HOH A 119 419 36 HOH HOH . C 3 HOH A 120 420 221 HOH HOH . C 3 HOH A 121 421 159 HOH HOH . C 3 HOH A 122 422 109 HOH HOH . C 3 HOH A 123 423 233 HOH HOH . C 3 HOH A 124 424 228 HOH HOH . C 3 HOH A 125 425 215 HOH HOH . C 3 HOH A 126 426 231 HOH HOH . C 3 HOH A 127 427 217 HOH HOH . C 3 HOH A 128 428 111 HOH HOH . C 3 HOH A 129 429 189 HOH HOH . C 3 HOH A 130 430 154 HOH HOH . C 3 HOH A 131 431 211 HOH HOH . C 3 HOH A 132 432 133 HOH HOH . C 3 HOH A 133 433 209 HOH HOH . C 3 HOH A 134 434 224 HOH HOH . C 3 HOH A 135 435 78 HOH HOH . C 3 HOH A 136 436 187 HOH HOH . C 3 HOH A 137 437 79 HOH HOH . C 3 HOH A 138 438 164 HOH HOH . C 3 HOH A 139 439 33 HOH HOH . C 3 HOH A 140 440 150 HOH HOH . C 3 HOH A 141 441 51 HOH HOH . C 3 HOH A 142 442 178 HOH HOH . C 3 HOH A 143 443 156 HOH HOH . C 3 HOH A 144 444 127 HOH HOH . C 3 HOH A 145 445 123 HOH HOH . C 3 HOH A 146 446 230 HOH HOH . C 3 HOH A 147 447 185 HOH HOH . C 3 HOH A 148 448 90 HOH HOH . C 3 HOH A 149 449 198 HOH HOH . C 3 HOH A 150 450 204 HOH HOH . C 3 HOH A 151 451 128 HOH HOH . C 3 HOH A 152 452 166 HOH HOH . C 3 HOH A 153 453 60 HOH HOH . C 3 HOH A 154 454 87 HOH HOH . C 3 HOH A 155 455 112 HOH HOH . C 3 HOH A 156 456 180 HOH HOH . C 3 HOH A 157 457 129 HOH HOH . C 3 HOH A 158 458 67 HOH HOH . C 3 HOH A 159 459 203 HOH HOH . C 3 HOH A 160 460 80 HOH HOH . C 3 HOH A 161 461 161 HOH HOH . C 3 HOH A 162 462 235 HOH HOH . C 3 HOH A 163 463 101 HOH HOH . C 3 HOH A 164 464 113 HOH HOH . C 3 HOH A 165 465 83 HOH HOH . C 3 HOH A 166 466 176 HOH HOH . C 3 HOH A 167 467 97 HOH HOH . C 3 HOH A 168 468 110 HOH HOH . C 3 HOH A 169 469 131 HOH HOH . C 3 HOH A 170 470 104 HOH HOH . C 3 HOH A 171 471 155 HOH HOH . C 3 HOH A 172 472 202 HOH HOH . C 3 HOH A 173 473 172 HOH HOH . C 3 HOH A 174 474 201 HOH HOH . C 3 HOH A 175 475 103 HOH HOH . C 3 HOH A 176 476 62 HOH HOH . C 3 HOH A 177 477 42 HOH HOH . C 3 HOH A 178 478 167 HOH HOH . C 3 HOH A 179 479 199 HOH HOH . C 3 HOH A 180 480 24 HOH HOH . C 3 HOH A 181 481 173 HOH HOH . C 3 HOH A 182 482 171 HOH HOH . C 3 HOH A 183 483 76 HOH HOH . C 3 HOH A 184 484 214 HOH HOH . C 3 HOH A 185 485 168 HOH HOH . C 3 HOH A 186 486 65 HOH HOH . C 3 HOH A 187 487 169 HOH HOH . C 3 HOH A 188 488 74 HOH HOH . C 3 HOH A 189 489 174 HOH HOH . C 3 HOH A 190 490 197 HOH HOH . C 3 HOH A 191 491 151 HOH HOH . C 3 HOH A 192 492 135 HOH HOH . C 3 HOH A 193 493 194 HOH HOH . C 3 HOH A 194 494 158 HOH HOH . C 3 HOH A 195 495 124 HOH HOH . C 3 HOH A 196 496 207 HOH HOH . C 3 HOH A 197 497 56 HOH HOH . C 3 HOH A 198 498 115 HOH HOH . C 3 HOH A 199 499 175 HOH HOH . C 3 HOH A 200 500 177 HOH HOH . C 3 HOH A 201 501 48 HOH HOH . C 3 HOH A 202 502 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 Y18 . . . B 2 17.267 -15.388 -3.404 1 11.32 ? C02 Y18 201 A 1 HETATM 2 C C04 Y18 . . . B 2 18.621 -17.173 -4.652 1 13.41 ? C04 Y18 201 A 1 HETATM 3 C C05 Y18 . . . B 2 18.285 -16.414 -5.887 1 11.68 ? C05 Y18 201 A 1 HETATM 4 C C06 Y18 . . . B 2 17.61 -14.488 -4.463 1 8.7 ? C06 Y18 201 A 1 HETATM 5 C C07 Y18 . . . B 2 18.093 -15.016 -5.684 1 8.95 ? C07 Y18 201 A 1 HETATM 6 C C09 Y18 . . . B 2 18.785 -13.853 -7.933 1 13.65 ? C09 Y18 201 A 1 HETATM 7 C C10 Y18 . . . B 2 17.621 -14.153 -9.067 1 10.32 ? C10 Y18 201 A 1 HETATM 8 C C11 Y18 . . . B 2 16.647 -12.987 -9.114 1 11.21 ? C11 Y18 201 A 1 HETATM 9 C C13 Y18 . . . B 2 14.357 -12.8 -10.211 1 9.43 ? C13 Y18 201 A 1 HETATM 10 C C14 Y18 . . . B 2 15.457 -15.038 -9.461 1 13.08 ? C14 Y18 201 A 1 HETATM 11 C C15 Y18 . . . B 2 16.792 -15.441 -8.777 1 10.82 ? C15 Y18 201 A 1 HETATM 12 C C17 Y18 . . . B 2 17.948 -12.734 -5.906 1 10.62 ? C17 Y18 201 A 1 HETATM 13 C C18 Y18 . . . B 2 17.509 -13.112 -4.626 1 8.69 ? C18 Y18 201 A 1 HETATM 14 C C19 Y18 . . . B 2 17.106 -12.101 -3.763 1 10.55 ? C19 Y18 201 A 1 HETATM 15 C C20 Y18 . . . B 2 17.16 -10.8 -4.21 1 12.9 ? C20 Y18 201 A 1 HETATM 16 C C21 Y18 . . . B 2 17.604 -10.456 -5.515 1 11.38 ? C21 Y18 201 A 1 HETATM 17 C C22 Y18 . . . B 2 17.99 -11.42 -6.388 1 13.21 ? C22 Y18 201 A 1 HETATM 18 N N03 Y18 . . . B 2 17.72 -16.763 -3.543 1 14.16 ? N03 Y18 201 A 1 HETATM 19 N N08 Y18 . . . B 2 18.268 -13.963 -6.543 1 11.2 ? N08 Y18 201 A 1 HETATM 20 N N12 Y18 . . . B 2 15.419 -13.65 -9.657 1 9.95 ? N12 Y18 201 A 1 HETATM 21 O O01 Y18 . . . B 2 16.557 -15.056 -2.461 1 12.4 ? O01 Y18 201 A 1 HETATM 22 O O16 Y18 . . . B 2 14.557 -15.777 -9.787 1 12.52 ? O16 Y18 201 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #