data_6PWJ # _model_server_result.job_id 1mgeYvYh8Spvw47MMLSzYg _model_server_result.datetime_utc '2024-10-19 10:31:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pwj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":702}' # _entry.id 6PWJ # _exptl.entry_id 6PWJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6PWJ _cell.length_a 129.83 _cell.length_b 129.83 _cell.length_c 114.441 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PWJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 218 A GLU 438 1_555 C MG MG . A MG 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc2 A OD1 ASN 272 A ASN 492 1_555 C MG MG . A MG 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc3 A OE1 GLU 304 A GLU 524 1_555 C MG MG . A MG 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc4 A OD2 ASP 334 A ASP 554 1_555 C MG MG . A MG 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc5 C MG MG . A MG 1000 1_555 F O HOH . A HOH 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc6 C MG MG . A MG 1000 1_555 F O HOH . A HOH 1105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc7 B OE2 GLU 218 B GLU 438 1_555 D MG MG . B MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc8 B OD1 ASN 272 B ASN 492 1_555 D MG MG . B MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc9 B OE1 GLU 304 B GLU 524 1_555 D MG MG . B MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc10 B OD2 ASP 334 B ASP 554 1_555 D MG MG . B MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc11 D MG MG . B MG 701 1_555 G O HOH . B HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc12 D MG MG . B MG 701 1_555 G O HOH . B HOH 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 237 n n C1 C2 PGE sing 238 n n C1 H1 PGE sing 239 n n C1 H12 PGE sing 240 n n O1 HO1 PGE sing 241 n n C2 O2 PGE sing 242 n n C2 H2 PGE sing 243 n n C2 H22 PGE sing 244 n n O2 C3 PGE sing 245 n n C3 C4 PGE sing 246 n n C3 H3 PGE sing 247 n n C3 H32 PGE sing 248 n n C4 O3 PGE sing 249 n n C4 H4 PGE sing 250 n n C4 H42 PGE sing 251 n n O4 C6 PGE sing 252 n n O4 HO4 PGE sing 253 n n C6 C5 PGE sing 254 n n C6 H6 PGE sing 255 n n C6 H62 PGE sing 256 n n C5 O3 PGE sing 257 n n C5 H5 PGE sing 258 n n C5 H52 PGE sing 259 n n # _atom_sites.entry_id 6PWJ _atom_sites.fract_transf_matrix[1][1] 0.007702 _atom_sites.fract_transf_matrix[1][2] 0.004447 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008738 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 1000 1000 MG MG . D 2 MG B 1 701 701 MG MG . E 3 PGE B 1 702 702 PGE PGE . F 4 HOH A 1 1101 1101 HOH HOH . F 4 HOH A 2 1102 1102 HOH HOH . F 4 HOH A 3 1103 1103 HOH HOH . F 4 HOH A 4 1104 1104 HOH HOH . F 4 HOH A 5 1105 1105 HOH HOH . F 4 HOH A 6 1106 1106 HOH HOH . G 4 HOH B 1 801 801 HOH HOH . G 4 HOH B 2 802 802 HOH HOH . G 4 HOH B 3 803 803 HOH HOH . G 4 HOH B 4 804 804 HOH HOH . G 4 HOH B 5 805 805 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . E 3 34.016 -62.089 41.014 0.49 46.5 ? C1 PGE 702 B 1 HETATM 2 O O1 PGE . . . E 3 32.61 -62.205 41.214 0.49 48.87 ? O1 PGE 702 B 1 HETATM 3 C C2 PGE . . . E 3 34.447 -62.883 39.797 0.49 49.43 ? C2 PGE 702 B 1 HETATM 4 O O2 PGE . . . E 3 35.855 -63.044 39.827 0.49 47.41 ? O2 PGE 702 B 1 HETATM 5 C C3 PGE . . . E 3 36.425 -63.357 38.571 0.49 41.21 ? C3 PGE 702 B 1 HETATM 6 C C4 PGE . . . E 3 36.231 -62.199 37.613 0.49 46.64 ? C4 PGE 702 B 1 HETATM 7 O O4 PGE . . . E 3 37.937 -59.541 34.853 0.49 49.02 ? O4 PGE 702 B 1 HETATM 8 C C6 PGE . . . E 3 36.951 -60.086 35.715 0.49 47.85 ? C6 PGE 702 B 1 HETATM 9 C C5 PGE . . . E 3 36.862 -61.573 35.445 0.49 47.84 ? C5 PGE 702 B 1 HETATM 10 O O3 PGE . . . E 3 37.233 -62.253 36.622 0.49 49.45 ? O3 PGE 702 B 1 HETATM 11 H H1 PGE . . . E 3 34.314 -61.043 40.854 0.49 55.92 ? H1 PGE 702 B 1 HETATM 12 H H12 PGE . . . E 3 34.577 -62.472 41.879 0.49 55.92 ? H12 PGE 702 B 1 HETATM 13 H HO1 PGE . . . E 3 32.43 -63.016 41.705 0.49 58.77 ? HO1 PGE 702 B 1 HETATM 14 H H2 PGE . . . E 3 33.939 -63.863 39.803 0.49 59.43 ? H2 PGE 702 B 1 HETATM 15 H H22 PGE . . . E 3 34.132 -62.349 38.884 0.49 59.43 ? H22 PGE 702 B 1 HETATM 16 H H3 PGE . . . E 3 37.505 -63.558 38.672 0.49 49.57 ? H3 PGE 702 B 1 HETATM 17 H H32 PGE . . . E 3 35.954 -64.257 38.142 0.49 49.57 ? H32 PGE 702 B 1 HETATM 18 H H4 PGE . . . E 3 35.226 -62.267 37.16 0.49 56.09 ? H4 PGE 702 B 1 HETATM 19 H H42 PGE . . . E 3 36.283 -61.25 38.174 0.49 56.09 ? H42 PGE 702 B 1 HETATM 20 H HO4 PGE . . . E 3 38.065 -58.62 35.106 0.49 58.94 ? HO4 PGE 702 B 1 HETATM 21 H H6 PGE . . . E 3 35.959 -59.636 35.539 0.49 57.54 ? H6 PGE 702 B 1 HETATM 22 H H62 PGE . . . E 3 37.207 -59.935 36.777 0.49 57.54 ? H62 PGE 702 B 1 HETATM 23 H H5 PGE . . . E 3 37.529 -61.832 34.605 0.49 57.53 ? H5 PGE 702 B 1 HETATM 24 H H52 PGE . . . E 3 35.832 -61.828 35.142 0.49 57.53 ? H52 PGE 702 B 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #