data_6PXS
#
_model_server_result.job_id            bOB7SNqOhDbBa-uUi4ta7w 
_model_server_result.datetime_utc      '2025-03-13 17:45:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pxs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":401}' 
#
_entry.id    6PXS 
#
_exptl.entry_id    6PXS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PXS 
_cell.length_a            113.457 
_cell.length_b            113.457 
_cell.length_c            266.119 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PXS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     6PXS 
_atom_sites.fract_transf_matrix[1][1]    0.008814 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008814 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003758 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 401 401 FAD FAD . 
F 2 FAD B 1 401 401 FAD FAD . 
G 2 FAD C 1 401 401 FAD FAD . 
H 2 FAD D 1 401 401 FAD FAD . 
I 3 HOH A 1 501 3 HOH HOH . 
I 3 HOH A 2 502 1 HOH HOH . 
I 3 HOH A 3 503 2 HOH HOH . 
I 3 HOH A 4 504 16 HOH HOH . 
I 3 HOH A 5 505 29 HOH HOH . 
I 3 HOH A 6 506 10 HOH HOH . 
J 3 HOH B 1 501 17 HOH HOH . 
J 3 HOH B 2 502 20 HOH HOH . 
J 3 HOH B 3 503 26 HOH HOH . 
J 3 HOH B 4 504 18 HOH HOH . 
J 3 HOH B 5 505 15 HOH HOH . 
J 3 HOH B 6 506 14 HOH HOH . 
J 3 HOH B 7 507 4 HOH HOH . 
J 3 HOH B 8 508 9 HOH HOH . 
J 3 HOH B 9 509 24 HOH HOH . 
J 3 HOH B 10 510 25 HOH HOH . 
J 3 HOH B 11 511 23 HOH HOH . 
K 3 HOH C 1 501 30 HOH HOH . 
K 3 HOH C 2 502 19 HOH HOH . 
K 3 HOH C 3 503 7 HOH HOH . 
K 3 HOH C 4 504 6 HOH HOH . 
K 3 HOH C 5 505 12 HOH HOH . 
K 3 HOH C 6 506 21 HOH HOH . 
L 3 HOH D 1 501 28 HOH HOH . 
L 3 HOH D 2 502 5 HOH HOH . 
L 3 HOH D 3 503 8 HOH HOH . 
L 3 HOH D 4 504 11 HOH HOH . 
L 3 HOH D 5 505 13 HOH HOH . 
L 3 HOH D 6 506 27 HOH HOH . 
L 3 HOH D 7 507 22 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . H 2 77.741 -17.265 24.01 1 47.69 ? PA FAD 401 D 1 
HETATM 2 O O1A FAD . . . H 2 78.087 -15.827 24.095 1 44.65 ? O1A FAD 401 D 1 
HETATM 3 O O2A FAD . . . H 2 76.297 -17.575 24.413 1 51.4 ? O2A FAD 401 D 1 
HETATM 4 O O5B FAD . . . H 2 78.068 -17.828 22.574 1 40.89 ? O5B FAD 401 D 1 
HETATM 5 C C5B FAD . . . H 2 77.49 -19.063 22.1 1 39.39 ? C5B FAD 401 D 1 
HETATM 6 C C4B FAD . . . H 2 77.325 -18.965 20.604 1 43.09 ? C4B FAD 401 D 1 
HETATM 7 O O4B FAD . . . H 2 77.308 -20.292 20.025 1 46.8 ? O4B FAD 401 D 1 
HETATM 8 C C3B FAD . . . H 2 76.032 -18.282 20.151 1 44.39 ? C3B FAD 401 D 1 
HETATM 9 O O3B FAD . . . H 2 76.273 -17.385 19.072 1 44.8 ? O3B FAD 401 D 1 
HETATM 10 C C2B FAD . . . H 2 75.159 -19.458 19.709 1 45.18 ? C2B FAD 401 D 1 
HETATM 11 O O2B FAD . . . H 2 74.206 -19.09 18.721 1 40.88 ? O2B FAD 401 D 1 
HETATM 12 C C1B FAD . . . H 2 76.221 -20.384 19.131 1 46.9 ? C1B FAD 401 D 1 
HETATM 13 N N9A FAD . . . H 2 75.805 -21.779 19.024 1 58.46 ? N9A FAD 401 D 1 
HETATM 14 C C8A FAD . . . H 2 75.38 -22.597 20.036 1 48.87 ? C8A FAD 401 D 1 
HETATM 15 N N7A FAD . . . H 2 75.056 -23.807 19.642 1 55.32 ? N7A FAD 401 D 1 
HETATM 16 C C5A FAD . . . H 2 75.276 -23.777 18.274 1 52.8 ? C5A FAD 401 D 1 
HETATM 17 C C6A FAD . . . H 2 75.121 -24.747 17.265 1 54.91 ? C6A FAD 401 D 1 
HETATM 18 N N6A FAD . . . H 2 74.688 -25.991 17.491 1 54.5 ? N6A FAD 401 D 1 
HETATM 19 N N1A FAD . . . H 2 75.429 -24.391 15.998 1 50.03 ? N1A FAD 401 D 1 
HETATM 20 C C2A FAD . . . H 2 75.862 -23.15 15.763 1 52.75 ? C2A FAD 401 D 1 
HETATM 21 N N3A FAD . . . H 2 76.047 -22.155 16.634 1 51.8 ? N3A FAD 401 D 1 
HETATM 22 C C4A FAD . . . H 2 75.734 -22.533 17.878 1 52.2 ? C4A FAD 401 D 1 
HETATM 23 N N1 FAD . . . H 2 80.532 -11.741 32.502 1 66.82 ? N1 FAD 401 D 1 
HETATM 24 C C2 FAD . . . H 2 81.445 -10.881 33.04 1 67.7 ? C2 FAD 401 D 1 
HETATM 25 O O2 FAD . . . H 2 82.635 -11.191 33.155 1 69.33 ? O2 FAD 401 D 1 
HETATM 26 N N3 FAD . . . H 2 81.042 -9.627 33.467 1 68.09 ? N3 FAD 401 D 1 
HETATM 27 C C4 FAD . . . H 2 79.756 -9.127 33.408 1 69.8 ? C4 FAD 401 D 1 
HETATM 28 O O4 FAD . . . H 2 79.514 -7.994 33.821 1 69.15 ? O4 FAD 401 D 1 
HETATM 29 C C4X FAD . . . H 2 78.792 -10.049 32.836 1 68.83 ? C4X FAD 401 D 1 
HETATM 30 N N5 FAD . . . H 2 77.551 -9.659 32.742 1 67.18 ? N5 FAD 401 D 1 
HETATM 31 C C5X FAD . . . H 2 76.63 -10.54 32.196 1 64.96 ? C5X FAD 401 D 1 
HETATM 32 C C6 FAD . . . H 2 75.299 -10.138 32.086 1 64.19 ? C6 FAD 401 D 1 
HETATM 33 C C7 FAD . . . H 2 74.337 -10.984 31.543 1 62.83 ? C7 FAD 401 D 1 
HETATM 34 C C7M FAD . . . H 2 72.909 -10.515 31.443 1 64.48 ? C7M FAD 401 D 1 
HETATM 35 C C8 FAD . . . H 2 74.709 -12.263 31.1 1 60.99 ? C8 FAD 401 D 1 
HETATM 36 C C8M FAD . . . H 2 73.692 -13.203 30.508 1 63.45 ? C8M FAD 401 D 1 
HETATM 37 C C9 FAD . . . H 2 76.037 -12.664 31.206 1 62.68 ? C9 FAD 401 D 1 
HETATM 38 C C9A FAD . . . H 2 76.997 -11.818 31.749 1 64.57 ? C9A FAD 401 D 1 
HETATM 39 N N10 FAD . . . H 2 78.351 -12.198 31.868 1 64.39 ? N10 FAD 401 D 1 
HETATM 40 C C10 FAD . . . H 2 79.276 -11.337 32.411 1 66.66 ? C10 FAD 401 D 1 
HETATM 41 C C1' FAD . . . H 2 78.802 -13.527 31.426 1 61.63 ? C1' FAD 401 D 1 
HETATM 42 C C2' FAD . . . H 2 79.341 -13.532 29.999 1 58.46 ? C2' FAD 401 D 1 
HETATM 43 O O2' FAD . . . H 2 78.595 -12.63 29.181 1 58.4 ? O2' FAD 401 D 1 
HETATM 44 C C3' FAD . . . H 2 79.223 -14.944 29.426 1 57.28 ? C3' FAD 401 D 1 
HETATM 45 O O3' FAD . . . H 2 79.748 -15.863 30.377 1 60.01 ? O3' FAD 401 D 1 
HETATM 46 C C4' FAD . . . H 2 79.963 -15.135 28.103 1 56.91 ? C4' FAD 401 D 1 
HETATM 47 O O4' FAD . . . H 2 79.625 -14.058 27.23 1 58.89 ? O4' FAD 401 D 1 
HETATM 48 C C5' FAD . . . H 2 79.633 -16.458 27.446 1 53.23 ? C5' FAD 401 D 1 
HETATM 49 O O5' FAD . . . H 2 80.114 -16.44 26.085 1 51.94 ? O5' FAD 401 D 1 
HETATM 50 P P FAD . . . H 2 80.215 -17.762 25.238 1 51.42 ? P FAD 401 D 1 
HETATM 51 O O1P FAD . . . H 2 80.894 -17.473 23.895 1 53.62 ? O1P FAD 401 D 1 
HETATM 52 O O2P FAD . . . H 2 80.842 -18.845 26.031 1 54.74 ? O2P FAD 401 D 1 
HETATM 53 O O3P FAD . . . H 2 78.694 -18.11 24.955 1 49.91 ? O3P FAD 401 D 1 
HETATM 54 H H51A FAD . . . H 2 76.653 -19.197 22.503 1 47.27 ? H51A FAD 401 D 1 
HETATM 55 H H52A FAD . . . H 2 78.058 -19.78 22.31 1 47.27 ? H52A FAD 401 D 1 
HETATM 56 H H4B FAD . . . H 2 78.053 -18.503 20.232 1 51.7 ? H4B FAD 401 D 1 
HETATM 57 H H3B FAD . . . H 2 75.64 -17.837 20.879 1 53.26 ? H3B FAD 401 D 1 
HETATM 58 H HO3A FAD . . . H 2 77.079 -17.178 19.053 1 53.76 ? HO3A FAD 401 D 1 
HETATM 59 H H2B FAD . . . H 2 74.725 -19.854 20.442 1 54.21 ? H2B FAD 401 D 1 
HETATM 60 H HO2A FAD . . . H 2 74.406 -18.34 18.421 1 49.06 ? HO2A FAD 401 D 1 
HETATM 61 H H1B FAD . . . H 2 76.485 -20.087 18.28 1 56.28 ? H1B FAD 401 D 1 
HETATM 62 H H8A FAD . . . H 2 75.332 -22.323 20.922 1 58.64 ? H8A FAD 401 D 1 
HETATM 63 H H61A FAD . . . H 2 74.826 -26.612 16.901 1 65.4 ? H61A FAD 401 D 1 
HETATM 64 H H62A FAD . . . H 2 74.265 -26.175 18.226 1 65.4 ? H62A FAD 401 D 1 
HETATM 65 H H2A FAD . . . H 2 76.061 -22.953 14.877 1 63.3 ? H2A FAD 401 D 1 
HETATM 66 H HN3 FAD . . . H 2 81.652 -9.109 33.803 1 81.71 ? HN3 FAD 401 D 1 
HETATM 67 H H6 FAD . . . H 2 75.201 -9.276 32.418 1 77.03 ? H6 FAD 401 D 1 
HETATM 68 H HM71 FAD . . . H 2 72.63 -10.55 30.547 1 77.38 ? HM71 FAD 401 D 1 
HETATM 69 H HM72 FAD . . . H 2 72.847 -9.632 31.756 1 77.38 ? HM72 FAD 401 D 1 
HETATM 70 H HM73 FAD . . . H 2 72.36 -11.071 31.964 1 77.38 ? HM73 FAD 401 D 1 
HETATM 71 H HM81 FAD . . . H 2 74.128 -13.959 30.162 1 76.14 ? HM81 FAD 401 D 1 
HETATM 72 H HM82 FAD . . . H 2 73.227 -12.767 29.818 1 76.14 ? HM82 FAD 401 D 1 
HETATM 73 H HM83 FAD . . . H 2 73.086 -13.469 31.175 1 76.14 ? HM83 FAD 401 D 1 
HETATM 74 H H9 FAD . . . H 2 75.984 -13.591 31.165 1 75.21 ? H9 FAD 401 D 1 
HETATM 75 H "H1'1" FAD . . . H 2 79.482 -13.819 32.004 1 73.95 ? "H1'1" FAD 401 D 1 
HETATM 76 H "H1'2" FAD . . . H 2 78.076 -14.12 31.473 1 73.95 ? "H1'2" FAD 401 D 1 
HETATM 77 H H2' FAD . . . H 2 80.243 -13.27 30.006 1 70.15 ? H2' FAD 401 D 1 
HETATM 78 H HO2' FAD . . . H 2 77.832 -12.935 29.057 1 70.08 ? HO2' FAD 401 D 1 
HETATM 79 H H3' FAD . . . H 2 78.314 -15.138 29.292 1 68.73 ? H3' FAD 401 D 1 
HETATM 80 H HO3' FAD . . . H 2 79.122 -16.217 30.796 1 72.02 ? HO3' FAD 401 D 1 
HETATM 81 H H4' FAD . . . H 2 80.887 -15.109 28.27 1 68.29 ? H4' FAD 401 D 1 
HETATM 82 H HO4' FAD . . . H 2 80.201 -13.993 26.633 1 70.67 ? HO4' FAD 401 D 1 
HETATM 83 H "H5'1" FAD . . . H 2 80.048 -17.156 27.917 1 63.88 ? "H5'1" FAD 401 D 1 
HETATM 84 H "H5'2" FAD . . . H 2 78.703 -16.587 27.449 1 63.88 ? "H5'2" FAD 401 D 1 
#
_model_server_stats.io_time_ms              39 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           84 
#