data_6PYA
#
_model_server_result.job_id            ZrDKCqEJ66ABNuUmN6QVRg 
_model_server_result.datetime_utc      '2024-12-19 19:09:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pya 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    6PYA 
#
_exptl.entry_id    6PYA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              273.332 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-[(1H-imidazol-1-yl)methyl]-2-phenyl-1H-indole 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PYA 
_cell.length_a            52.241 
_cell.length_b            52.241 
_cell.length_c            147.87 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PYA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        95 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_444 -y-1,-x-1,-z-1/4 0 -1 0 -1 0 0 0 0 -1 -52.241 -52.241 -36.9675 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 164 A CYS 164 1_555 A SG CYS 188 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc1 A OD1 ASP 50 A ASP 50 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
metalc ? metalc2 A OD2 ASP 50 A ASP 50 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? 
metalc ? metalc3 A O GLU 52 A GLU 52 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc4 A O ALA 160 A ALA 160 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc5 C CA CA . A CA 302 1_555 D O HOH . A HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc6 C CA CA . A CA 302 1_555 D O HOH . A HOH 489 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
metalc ? metalc7 C CA CA . A CA 302 1_555 D O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? 
#
_chem_comp.formula           'C18 H15 N3' 
_chem_comp.formula_weight    273.332 
_chem_comp.id                P57 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-[(1H-imidazol-1-yl)methyl]-2-phenyl-1H-indole 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAM CAL P57 doub 237 n y 
CAM CAN P57 sing 238 n y 
CAL CAK P57 sing 239 n y 
CAN CAO P57 doub 240 n y 
CAK CAJ P57 doub 241 n y 
CAO CAJ P57 sing 242 n y 
CAJ CAI P57 sing 243 n n 
CAI NAH P57 sing 244 n y 
CAI CAG P57 doub 245 n y 
NAH CAE P57 sing 246 n y 
CAG CAP P57 sing 247 n n 
CAG CAF P57 sing 248 n y 
CAP NAQ P57 sing 249 n n 
CAE CAF P57 doub 250 n y 
CAE CAD P57 sing 251 n y 
NAQ CAU P57 sing 252 n y 
NAQ CAR P57 sing 253 n y 
CAU CAT P57 doub 254 n y 
CAF CAA P57 sing 255 n y 
CAD CAC P57 doub 256 n y 
CAR NAS P57 doub 257 n y 
CAT NAS P57 sing 258 n y 
CAA CAB P57 doub 259 n y 
CAC CAB P57 sing 260 n y 
CAA H1 P57 sing 261 n n 
CAB H2 P57 sing 262 n n 
CAC H3 P57 sing 263 n n 
CAD H4 P57 sing 264 n n 
CAK H5 P57 sing 265 n n 
CAL H6 P57 sing 266 n n 
CAM H7 P57 sing 267 n n 
CAN H8 P57 sing 268 n n 
CAO H9 P57 sing 269 n n 
CAP H10 P57 sing 270 n n 
CAP H11 P57 sing 271 n n 
CAR H12 P57 sing 272 n n 
CAT H13 P57 sing 273 n n 
CAU H14 P57 sing 274 n n 
NAH H15 P57 sing 275 n n 
#
_atom_sites.entry_id                     6PYA 
_atom_sites.fract_transf_matrix[1][1]    0.019142 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019142 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006763 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 P57 A 1 301 2 P57 DRG . 
C 3 CA A 1 302 1 CA CA . 
D 4 HOH A 1 401 106 HOH HOH . 
D 4 HOH A 2 402 111 HOH HOH . 
D 4 HOH A 3 403 17 HOH HOH . 
D 4 HOH A 4 404 84 HOH HOH . 
D 4 HOH A 5 405 32 HOH HOH . 
D 4 HOH A 6 406 121 HOH HOH . 
D 4 HOH A 7 407 14 HOH HOH . 
D 4 HOH A 8 408 147 HOH HOH . 
D 4 HOH A 9 409 41 HOH HOH . 
D 4 HOH A 10 410 125 HOH HOH . 
D 4 HOH A 11 411 82 HOH HOH . 
D 4 HOH A 12 412 43 HOH HOH . 
D 4 HOH A 13 413 150 HOH HOH . 
D 4 HOH A 14 414 117 HOH HOH . 
D 4 HOH A 15 415 140 HOH HOH . 
D 4 HOH A 16 416 76 HOH HOH . 
D 4 HOH A 17 417 94 HOH HOH . 
D 4 HOH A 18 418 48 HOH HOH . 
D 4 HOH A 19 419 158 HOH HOH . 
D 4 HOH A 20 420 2 HOH HOH . 
D 4 HOH A 21 421 8 HOH HOH . 
D 4 HOH A 22 422 87 HOH HOH . 
D 4 HOH A 23 423 22 HOH HOH . 
D 4 HOH A 24 424 29 HOH HOH . 
D 4 HOH A 25 425 15 HOH HOH . 
D 4 HOH A 26 426 20 HOH HOH . 
D 4 HOH A 27 427 4 HOH HOH . 
D 4 HOH A 28 428 99 HOH HOH . 
D 4 HOH A 29 429 88 HOH HOH . 
D 4 HOH A 30 430 3 HOH HOH . 
D 4 HOH A 31 431 100 HOH HOH . 
D 4 HOH A 32 432 28 HOH HOH . 
D 4 HOH A 33 433 52 HOH HOH . 
D 4 HOH A 34 434 35 HOH HOH . 
D 4 HOH A 35 435 44 HOH HOH . 
D 4 HOH A 36 436 58 HOH HOH . 
D 4 HOH A 37 437 9 HOH HOH . 
D 4 HOH A 38 438 64 HOH HOH . 
D 4 HOH A 39 439 46 HOH HOH . 
D 4 HOH A 40 440 79 HOH HOH . 
D 4 HOH A 41 441 80 HOH HOH . 
D 4 HOH A 42 442 23 HOH HOH . 
D 4 HOH A 43 443 24 HOH HOH . 
D 4 HOH A 44 444 115 HOH HOH . 
D 4 HOH A 45 445 6 HOH HOH . 
D 4 HOH A 46 446 36 HOH HOH . 
D 4 HOH A 47 447 1 HOH HOH . 
D 4 HOH A 48 448 12 HOH HOH . 
D 4 HOH A 49 449 133 HOH HOH . 
D 4 HOH A 50 450 120 HOH HOH . 
D 4 HOH A 51 451 33 HOH HOH . 
D 4 HOH A 52 452 72 HOH HOH . 
D 4 HOH A 53 453 67 HOH HOH . 
D 4 HOH A 54 454 37 HOH HOH . 
D 4 HOH A 55 455 57 HOH HOH . 
D 4 HOH A 56 456 124 HOH HOH . 
D 4 HOH A 57 457 49 HOH HOH . 
D 4 HOH A 58 458 70 HOH HOH . 
D 4 HOH A 59 459 10 HOH HOH . 
D 4 HOH A 60 460 31 HOH HOH . 
D 4 HOH A 61 461 5 HOH HOH . 
D 4 HOH A 62 462 93 HOH HOH . 
D 4 HOH A 63 463 30 HOH HOH . 
D 4 HOH A 64 464 89 HOH HOH . 
D 4 HOH A 65 465 135 HOH HOH . 
D 4 HOH A 66 466 13 HOH HOH . 
D 4 HOH A 67 467 130 HOH HOH . 
D 4 HOH A 68 468 34 HOH HOH . 
D 4 HOH A 69 469 26 HOH HOH . 
D 4 HOH A 70 470 85 HOH HOH . 
D 4 HOH A 71 471 27 HOH HOH . 
D 4 HOH A 72 472 95 HOH HOH . 
D 4 HOH A 73 473 42 HOH HOH . 
D 4 HOH A 74 474 53 HOH HOH . 
D 4 HOH A 75 475 114 HOH HOH . 
D 4 HOH A 76 476 109 HOH HOH . 
D 4 HOH A 77 477 126 HOH HOH . 
D 4 HOH A 78 478 56 HOH HOH . 
D 4 HOH A 79 479 90 HOH HOH . 
D 4 HOH A 80 480 59 HOH HOH . 
D 4 HOH A 81 481 40 HOH HOH . 
D 4 HOH A 82 482 55 HOH HOH . 
D 4 HOH A 83 483 73 HOH HOH . 
D 4 HOH A 84 484 66 HOH HOH . 
D 4 HOH A 85 485 68 HOH HOH . 
D 4 HOH A 86 486 113 HOH HOH . 
D 4 HOH A 87 487 91 HOH HOH . 
D 4 HOH A 88 488 83 HOH HOH . 
D 4 HOH A 89 489 19 HOH HOH . 
D 4 HOH A 90 490 118 HOH HOH . 
D 4 HOH A 91 491 39 HOH HOH . 
D 4 HOH A 92 492 45 HOH HOH . 
D 4 HOH A 93 493 129 HOH HOH . 
D 4 HOH A 94 494 16 HOH HOH . 
D 4 HOH A 95 495 69 HOH HOH . 
D 4 HOH A 96 496 50 HOH HOH . 
D 4 HOH A 97 497 54 HOH HOH . 
D 4 HOH A 98 498 97 HOH HOH . 
D 4 HOH A 99 499 61 HOH HOH . 
D 4 HOH A 100 500 62 HOH HOH . 
D 4 HOH A 101 501 18 HOH HOH . 
D 4 HOH A 102 502 157 HOH HOH . 
D 4 HOH A 103 503 60 HOH HOH . 
D 4 HOH A 104 504 11 HOH HOH . 
D 4 HOH A 105 505 119 HOH HOH . 
D 4 HOH A 106 506 86 HOH HOH . 
D 4 HOH A 107 507 63 HOH HOH . 
D 4 HOH A 108 508 145 HOH HOH . 
D 4 HOH A 109 509 81 HOH HOH . 
D 4 HOH A 110 510 137 HOH HOH . 
D 4 HOH A 111 511 159 HOH HOH . 
D 4 HOH A 112 512 146 HOH HOH . 
D 4 HOH A 113 513 105 HOH HOH . 
D 4 HOH A 114 514 21 HOH HOH . 
D 4 HOH A 115 515 7 HOH HOH . 
D 4 HOH A 116 516 25 HOH HOH . 
D 4 HOH A 117 517 103 HOH HOH . 
D 4 HOH A 118 518 65 HOH HOH . 
D 4 HOH A 119 519 74 HOH HOH . 
D 4 HOH A 120 520 98 HOH HOH . 
D 4 HOH A 121 521 134 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA P57 . . . B 2 -15.11 -31.6 -2.32 1 30.54 ? CAA P57 301 A 1 
HETATM 2 C CAB P57 . . . B 2 -14.486 -32.594 -1.576 1 32.52 ? CAB P57 301 A 1 
HETATM 3 C CAC P57 . . . B 2 -13.578 -33.441 -2.212 1 36.66 ? CAC P57 301 A 1 
HETATM 4 C CAD P57 . . . B 2 -13.286 -33.3 -3.565 1 39.29 ? CAD P57 301 A 1 
HETATM 5 C CAE P57 . . . B 2 -13.918 -32.28 -4.319 1 31.31 ? CAE P57 301 A 1 
HETATM 6 C CAF P57 . . . B 2 -14.822 -31.46 -3.703 1 26.26 ? CAF P57 301 A 1 
HETATM 7 C CAG P57 . . . B 2 -15.287 -30.559 -4.703 1 22.29 ? CAG P57 301 A 1 
HETATM 8 C CAI P57 . . . B 2 -14.635 -30.919 -5.881 1 28.76 ? CAI P57 301 A 1 
HETATM 9 C CAJ P57 . . . B 2 -14.752 -30.252 -7.23 1 25.01 ? CAJ P57 301 A 1 
HETATM 10 C CAK P57 . . . B 2 -14.455 -30.966 -8.381 1 28.59 ? CAK P57 301 A 1 
HETATM 11 C CAL P57 . . . B 2 -14.545 -30.31 -9.589 1 25.69 ? CAL P57 301 A 1 
HETATM 12 C CAM P57 . . . B 2 -14.886 -28.97 -9.641 1 23.97 ? CAM P57 301 A 1 
HETATM 13 C CAN P57 . . . B 2 -15.15 -28.254 -8.493 1 31.62 ? CAN P57 301 A 1 
HETATM 14 C CAO P57 . . . B 2 -15.065 -28.908 -7.278 1 24.39 ? CAO P57 301 A 1 
HETATM 15 C CAP P57 . . . B 2 -16.325 -29.451 -4.479 1 24.76 ? CAP P57 301 A 1 
HETATM 16 C CAR P57 . . . B 2 -16.413 -27.222 -3.438 1 21.47 ? CAR P57 301 A 1 
HETATM 17 C CAT P57 . . . B 2 -14.328 -26.723 -3.255 1 26.43 ? CAT P57 301 A 1 
HETATM 18 C CAU P57 . . . B 2 -14.436 -27.975 -3.831 1 23.37 ? CAU P57 301 A 1 
HETATM 19 N NAH P57 . . . B 2 -13.833 -31.932 -5.636 1 28.46 ? NAH P57 301 A 1 
HETATM 20 N NAQ P57 . . . B 2 -15.732 -28.237 -3.937 1 23.22 ? NAQ P57 301 A 1 
HETATM 21 N NAS P57 . . . B 2 -15.565 -26.293 -3.046 1 22.28 ? NAS P57 301 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           21 
#