data_6PYA # _model_server_result.job_id qjxMvOnry1On9IVWQwElew _model_server_result.datetime_utc '2024-12-19 19:25:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pya # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6PYA # _exptl.entry_id 6PYA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PYA _cell.length_a 52.241 _cell.length_b 52.241 _cell.length_c 147.87 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PYA _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_444 -y-1,-x-1,-z-1/4 0 -1 0 -1 0 0 0 0 -1 -52.241 -52.241 -36.9675 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 164 A CYS 164 1_555 A SG CYS 188 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc1 A OD1 ASP 50 A ASP 50 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc2 A OD2 ASP 50 A ASP 50 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc3 A O GLU 52 A GLU 52 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc4 A O ALA 160 A ALA 160 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc5 C CA CA . A CA 302 1_555 D O HOH . A HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc6 C CA CA . A CA 302 1_555 D O HOH . A HOH 489 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc7 C CA CA . A CA 302 1_555 D O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6PYA _atom_sites.fract_transf_matrix[1][1] 0.019142 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019142 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006763 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P57 A 1 301 2 P57 DRG . C 3 CA A 1 302 1 CA CA . D 4 HOH A 1 401 106 HOH HOH . D 4 HOH A 2 402 111 HOH HOH . D 4 HOH A 3 403 17 HOH HOH . D 4 HOH A 4 404 84 HOH HOH . D 4 HOH A 5 405 32 HOH HOH . D 4 HOH A 6 406 121 HOH HOH . D 4 HOH A 7 407 14 HOH HOH . D 4 HOH A 8 408 147 HOH HOH . D 4 HOH A 9 409 41 HOH HOH . D 4 HOH A 10 410 125 HOH HOH . D 4 HOH A 11 411 82 HOH HOH . D 4 HOH A 12 412 43 HOH HOH . D 4 HOH A 13 413 150 HOH HOH . D 4 HOH A 14 414 117 HOH HOH . D 4 HOH A 15 415 140 HOH HOH . D 4 HOH A 16 416 76 HOH HOH . D 4 HOH A 17 417 94 HOH HOH . D 4 HOH A 18 418 48 HOH HOH . D 4 HOH A 19 419 158 HOH HOH . D 4 HOH A 20 420 2 HOH HOH . D 4 HOH A 21 421 8 HOH HOH . D 4 HOH A 22 422 87 HOH HOH . D 4 HOH A 23 423 22 HOH HOH . D 4 HOH A 24 424 29 HOH HOH . D 4 HOH A 25 425 15 HOH HOH . D 4 HOH A 26 426 20 HOH HOH . D 4 HOH A 27 427 4 HOH HOH . D 4 HOH A 28 428 99 HOH HOH . D 4 HOH A 29 429 88 HOH HOH . D 4 HOH A 30 430 3 HOH HOH . D 4 HOH A 31 431 100 HOH HOH . D 4 HOH A 32 432 28 HOH HOH . D 4 HOH A 33 433 52 HOH HOH . D 4 HOH A 34 434 35 HOH HOH . D 4 HOH A 35 435 44 HOH HOH . D 4 HOH A 36 436 58 HOH HOH . D 4 HOH A 37 437 9 HOH HOH . D 4 HOH A 38 438 64 HOH HOH . D 4 HOH A 39 439 46 HOH HOH . D 4 HOH A 40 440 79 HOH HOH . D 4 HOH A 41 441 80 HOH HOH . D 4 HOH A 42 442 23 HOH HOH . D 4 HOH A 43 443 24 HOH HOH . D 4 HOH A 44 444 115 HOH HOH . D 4 HOH A 45 445 6 HOH HOH . D 4 HOH A 46 446 36 HOH HOH . D 4 HOH A 47 447 1 HOH HOH . D 4 HOH A 48 448 12 HOH HOH . D 4 HOH A 49 449 133 HOH HOH . D 4 HOH A 50 450 120 HOH HOH . D 4 HOH A 51 451 33 HOH HOH . D 4 HOH A 52 452 72 HOH HOH . D 4 HOH A 53 453 67 HOH HOH . D 4 HOH A 54 454 37 HOH HOH . D 4 HOH A 55 455 57 HOH HOH . D 4 HOH A 56 456 124 HOH HOH . D 4 HOH A 57 457 49 HOH HOH . D 4 HOH A 58 458 70 HOH HOH . D 4 HOH A 59 459 10 HOH HOH . D 4 HOH A 60 460 31 HOH HOH . D 4 HOH A 61 461 5 HOH HOH . D 4 HOH A 62 462 93 HOH HOH . D 4 HOH A 63 463 30 HOH HOH . D 4 HOH A 64 464 89 HOH HOH . D 4 HOH A 65 465 135 HOH HOH . D 4 HOH A 66 466 13 HOH HOH . D 4 HOH A 67 467 130 HOH HOH . D 4 HOH A 68 468 34 HOH HOH . D 4 HOH A 69 469 26 HOH HOH . D 4 HOH A 70 470 85 HOH HOH . D 4 HOH A 71 471 27 HOH HOH . D 4 HOH A 72 472 95 HOH HOH . D 4 HOH A 73 473 42 HOH HOH . D 4 HOH A 74 474 53 HOH HOH . D 4 HOH A 75 475 114 HOH HOH . D 4 HOH A 76 476 109 HOH HOH . D 4 HOH A 77 477 126 HOH HOH . D 4 HOH A 78 478 56 HOH HOH . D 4 HOH A 79 479 90 HOH HOH . D 4 HOH A 80 480 59 HOH HOH . D 4 HOH A 81 481 40 HOH HOH . D 4 HOH A 82 482 55 HOH HOH . D 4 HOH A 83 483 73 HOH HOH . D 4 HOH A 84 484 66 HOH HOH . D 4 HOH A 85 485 68 HOH HOH . D 4 HOH A 86 486 113 HOH HOH . D 4 HOH A 87 487 91 HOH HOH . D 4 HOH A 88 488 83 HOH HOH . D 4 HOH A 89 489 19 HOH HOH . D 4 HOH A 90 490 118 HOH HOH . D 4 HOH A 91 491 39 HOH HOH . D 4 HOH A 92 492 45 HOH HOH . D 4 HOH A 93 493 129 HOH HOH . D 4 HOH A 94 494 16 HOH HOH . D 4 HOH A 95 495 69 HOH HOH . D 4 HOH A 96 496 50 HOH HOH . D 4 HOH A 97 497 54 HOH HOH . D 4 HOH A 98 498 97 HOH HOH . D 4 HOH A 99 499 61 HOH HOH . D 4 HOH A 100 500 62 HOH HOH . D 4 HOH A 101 501 18 HOH HOH . D 4 HOH A 102 502 157 HOH HOH . D 4 HOH A 103 503 60 HOH HOH . D 4 HOH A 104 504 11 HOH HOH . D 4 HOH A 105 505 119 HOH HOH . D 4 HOH A 106 506 86 HOH HOH . D 4 HOH A 107 507 63 HOH HOH . D 4 HOH A 108 508 145 HOH HOH . D 4 HOH A 109 509 81 HOH HOH . D 4 HOH A 110 510 137 HOH HOH . D 4 HOH A 111 511 159 HOH HOH . D 4 HOH A 112 512 146 HOH HOH . D 4 HOH A 113 513 105 HOH HOH . D 4 HOH A 114 514 21 HOH HOH . D 4 HOH A 115 515 7 HOH HOH . D 4 HOH A 116 516 25 HOH HOH . D 4 HOH A 117 517 103 HOH HOH . D 4 HOH A 118 518 65 HOH HOH . D 4 HOH A 119 519 74 HOH HOH . D 4 HOH A 120 520 98 HOH HOH . D 4 HOH A 121 521 134 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -8.91 _atom_site.Cartn_y -13.01 _atom_site.Cartn_z -18.05 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 26.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #