data_6PYF # _model_server_result.job_id eX2UMQ1FtETFybFeP3M2Hg _model_server_result.datetime_utc '2024-11-08 10:01:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pyf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6PYF # _exptl.entry_id 6PYF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PYF _cell.length_a 51.876 _cell.length_b 51.876 _cell.length_c 149.613 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PYF _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z+1/4 0 1 0 1 0 0 0 0 -1 0 0 37.40325 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 164 A CYS 164 1_555 A SG CYS 188 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc1 A OD1 ASP 50 A ASP 50 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc2 A OD2 ASP 50 A ASP 50 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc3 A O GLU 52 A GLU 52 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc4 A O ALA 160 A ALA 160 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc5 B CA CA . A CA 301 1_555 D O HOH . A HOH 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc6 B CA CA . A CA 301 1_555 D O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc7 B CA CA . A CA 301 1_555 D O HOH . A HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6PYF _atom_sites.fract_transf_matrix[1][1] 0.019277 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019277 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 3 EST A 1 302 1 EST EST . D 4 HOH A 1 401 24 HOH HOH . D 4 HOH A 2 402 202 HOH HOH . D 4 HOH A 3 403 46 HOH HOH . D 4 HOH A 4 404 85 HOH HOH . D 4 HOH A 5 405 67 HOH HOH . D 4 HOH A 6 406 25 HOH HOH . D 4 HOH A 7 407 103 HOH HOH . D 4 HOH A 8 408 76 HOH HOH . D 4 HOH A 9 409 66 HOH HOH . D 4 HOH A 10 410 26 HOH HOH . D 4 HOH A 11 411 69 HOH HOH . D 4 HOH A 12 412 43 HOH HOH . D 4 HOH A 13 413 163 HOH HOH . D 4 HOH A 14 414 108 HOH HOH . D 4 HOH A 15 415 47 HOH HOH . D 4 HOH A 16 416 12 HOH HOH . D 4 HOH A 17 417 101 HOH HOH . D 4 HOH A 18 418 62 HOH HOH . D 4 HOH A 19 419 64 HOH HOH . D 4 HOH A 20 420 8 HOH HOH . D 4 HOH A 21 421 97 HOH HOH . D 4 HOH A 22 422 65 HOH HOH . D 4 HOH A 23 423 219 HOH HOH . D 4 HOH A 24 424 70 HOH HOH . D 4 HOH A 25 425 32 HOH HOH . D 4 HOH A 26 426 117 HOH HOH . D 4 HOH A 27 427 33 HOH HOH . D 4 HOH A 28 428 89 HOH HOH . D 4 HOH A 29 429 18 HOH HOH . D 4 HOH A 30 430 199 HOH HOH . D 4 HOH A 31 431 48 HOH HOH . D 4 HOH A 32 432 197 HOH HOH . D 4 HOH A 33 433 75 HOH HOH . D 4 HOH A 34 434 141 HOH HOH . D 4 HOH A 35 435 81 HOH HOH . D 4 HOH A 36 436 4 HOH HOH . D 4 HOH A 37 437 14 HOH HOH . D 4 HOH A 38 438 138 HOH HOH . D 4 HOH A 39 439 93 HOH HOH . D 4 HOH A 40 440 27 HOH HOH . D 4 HOH A 41 441 136 HOH HOH . D 4 HOH A 42 442 23 HOH HOH . D 4 HOH A 43 443 196 HOH HOH . D 4 HOH A 44 444 86 HOH HOH . D 4 HOH A 45 445 42 HOH HOH . D 4 HOH A 46 446 13 HOH HOH . D 4 HOH A 47 447 118 HOH HOH . D 4 HOH A 48 448 15 HOH HOH . D 4 HOH A 49 449 100 HOH HOH . D 4 HOH A 50 450 74 HOH HOH . D 4 HOH A 51 451 84 HOH HOH . D 4 HOH A 52 452 210 HOH HOH . D 4 HOH A 53 453 189 HOH HOH . D 4 HOH A 54 454 52 HOH HOH . D 4 HOH A 55 455 90 HOH HOH . D 4 HOH A 56 456 61 HOH HOH . D 4 HOH A 57 457 211 HOH HOH . D 4 HOH A 58 458 37 HOH HOH . D 4 HOH A 59 459 92 HOH HOH . D 4 HOH A 60 460 29 HOH HOH . D 4 HOH A 61 461 38 HOH HOH . D 4 HOH A 62 462 140 HOH HOH . D 4 HOH A 63 463 173 HOH HOH . D 4 HOH A 64 464 145 HOH HOH . D 4 HOH A 65 465 49 HOH HOH . D 4 HOH A 66 466 9 HOH HOH . D 4 HOH A 67 467 59 HOH HOH . D 4 HOH A 68 468 54 HOH HOH . D 4 HOH A 69 469 142 HOH HOH . D 4 HOH A 70 470 16 HOH HOH . D 4 HOH A 71 471 55 HOH HOH . D 4 HOH A 72 472 99 HOH HOH . D 4 HOH A 73 473 51 HOH HOH . D 4 HOH A 74 474 22 HOH HOH . D 4 HOH A 75 475 191 HOH HOH . D 4 HOH A 76 476 1 HOH HOH . D 4 HOH A 77 477 119 HOH HOH . D 4 HOH A 78 478 83 HOH HOH . D 4 HOH A 79 479 68 HOH HOH . D 4 HOH A 80 480 19 HOH HOH . D 4 HOH A 81 481 110 HOH HOH . D 4 HOH A 82 482 176 HOH HOH . D 4 HOH A 83 483 72 HOH HOH . D 4 HOH A 84 484 107 HOH HOH . D 4 HOH A 85 485 7 HOH HOH . D 4 HOH A 86 486 150 HOH HOH . D 4 HOH A 87 487 139 HOH HOH . D 4 HOH A 88 488 131 HOH HOH . D 4 HOH A 89 489 153 HOH HOH . D 4 HOH A 90 490 6 HOH HOH . D 4 HOH A 91 491 98 HOH HOH . D 4 HOH A 92 492 170 HOH HOH . D 4 HOH A 93 493 21 HOH HOH . D 4 HOH A 94 494 56 HOH HOH . D 4 HOH A 95 495 10 HOH HOH . D 4 HOH A 96 496 105 HOH HOH . D 4 HOH A 97 497 28 HOH HOH . D 4 HOH A 98 498 127 HOH HOH . D 4 HOH A 99 499 53 HOH HOH . D 4 HOH A 100 500 36 HOH HOH . D 4 HOH A 101 501 152 HOH HOH . D 4 HOH A 102 502 17 HOH HOH . D 4 HOH A 103 503 120 HOH HOH . D 4 HOH A 104 504 217 HOH HOH . D 4 HOH A 105 505 2 HOH HOH . D 4 HOH A 106 506 79 HOH HOH . D 4 HOH A 107 507 204 HOH HOH . D 4 HOH A 108 508 137 HOH HOH . D 4 HOH A 109 509 155 HOH HOH . D 4 HOH A 110 510 45 HOH HOH . D 4 HOH A 111 511 91 HOH HOH . D 4 HOH A 112 512 218 HOH HOH . D 4 HOH A 113 513 77 HOH HOH . D 4 HOH A 114 514 3 HOH HOH . D 4 HOH A 115 515 167 HOH HOH . D 4 HOH A 116 516 125 HOH HOH . D 4 HOH A 117 517 57 HOH HOH . D 4 HOH A 118 518 41 HOH HOH . D 4 HOH A 119 519 5 HOH HOH . D 4 HOH A 120 520 60 HOH HOH . D 4 HOH A 121 521 20 HOH HOH . D 4 HOH A 122 522 160 HOH HOH . D 4 HOH A 123 523 34 HOH HOH . D 4 HOH A 124 524 87 HOH HOH . D 4 HOH A 125 525 130 HOH HOH . D 4 HOH A 126 526 40 HOH HOH . D 4 HOH A 127 527 166 HOH HOH . D 4 HOH A 128 528 88 HOH HOH . D 4 HOH A 129 529 174 HOH HOH . D 4 HOH A 130 530 212 HOH HOH . D 4 HOH A 131 531 129 HOH HOH . D 4 HOH A 132 532 63 HOH HOH . D 4 HOH A 133 533 188 HOH HOH . D 4 HOH A 134 534 95 HOH HOH . D 4 HOH A 135 535 156 HOH HOH . D 4 HOH A 136 536 111 HOH HOH . D 4 HOH A 137 537 172 HOH HOH . D 4 HOH A 138 538 205 HOH HOH . D 4 HOH A 139 539 193 HOH HOH . D 4 HOH A 140 540 184 HOH HOH . D 4 HOH A 141 541 132 HOH HOH . D 4 HOH A 142 542 58 HOH HOH . D 4 HOH A 143 543 30 HOH HOH . D 4 HOH A 144 544 96 HOH HOH . D 4 HOH A 145 545 146 HOH HOH . D 4 HOH A 146 546 112 HOH HOH . D 4 HOH A 147 547 11 HOH HOH . D 4 HOH A 148 548 175 HOH HOH . D 4 HOH A 149 549 109 HOH HOH . D 4 HOH A 150 550 169 HOH HOH . D 4 HOH A 151 551 113 HOH HOH . D 4 HOH A 152 552 144 HOH HOH . D 4 HOH A 153 553 122 HOH HOH . D 4 HOH A 154 554 78 HOH HOH . D 4 HOH A 155 555 185 HOH HOH . D 4 HOH A 156 556 71 HOH HOH . D 4 HOH A 157 557 133 HOH HOH . D 4 HOH A 158 558 128 HOH HOH . D 4 HOH A 159 559 171 HOH HOH . D 4 HOH A 160 560 158 HOH HOH . D 4 HOH A 161 561 134 HOH HOH . D 4 HOH A 162 562 73 HOH HOH . D 4 HOH A 163 563 102 HOH HOH . D 4 HOH A 164 564 50 HOH HOH . D 4 HOH A 165 565 216 HOH HOH . D 4 HOH A 166 566 104 HOH HOH . D 4 HOH A 167 567 115 HOH HOH . D 4 HOH A 168 568 116 HOH HOH . D 4 HOH A 169 569 35 HOH HOH . D 4 HOH A 170 570 151 HOH HOH . D 4 HOH A 171 571 126 HOH HOH . D 4 HOH A 172 572 82 HOH HOH . D 4 HOH A 173 573 177 HOH HOH . D 4 HOH A 174 574 186 HOH HOH . D 4 HOH A 175 575 44 HOH HOH . D 4 HOH A 176 576 203 HOH HOH . D 4 HOH A 177 577 121 HOH HOH . D 4 HOH A 178 578 94 HOH HOH . D 4 HOH A 179 579 106 HOH HOH . D 4 HOH A 180 580 114 HOH HOH . D 4 HOH A 181 581 178 HOH HOH . D 4 HOH A 182 582 168 HOH HOH . D 4 HOH A 183 583 148 HOH HOH . D 4 HOH A 184 584 31 HOH HOH . D 4 HOH A 185 585 39 HOH HOH . D 4 HOH A 186 586 149 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -17.251 _atom_site.Cartn_y 13.078 _atom_site.Cartn_z 18.177 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 1 #