data_6PZ9
#
_model_server_result.job_id            kM2AbxDmAk0MnPFE6cA_1A 
_model_server_result.datetime_utc      '2024-11-23 10:58:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pz9 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1601}' 
#
_entry.id    6PZ9 
#
_exptl.entry_id    6PZ9 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              452.586 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Repaglinide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PZ9 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PZ9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
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_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H36 N2 O4' 
_chem_comp.formula_weight    452.586 
_chem_comp.id                BJX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Repaglinide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '2-ethoxy-4-[2-({(1S)-3-methyl-1-[2-(piperidin-1-yl)phenyl]butyl}amino)-2-oxoethyl]benzoic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 C9 BJX sing 119 n n 
C12 C9 BJX sing 120 n n 
C9 C8 BJX sing 121 n n 
C8 C5 BJX sing 122 n n 
C11 C15 BJX doub 123 n y 
C11 C7 BJX sing 124 n y 
C5 C7 BJX sing 125 n n 
C5 N1 BJX sing 126 n n 
O C16 BJX doub 127 n n 
C15 C14 BJX sing 128 n y 
C7 C6 BJX doub 129 n y 
C26 C25 BJX sing 130 n n 
C25 O1 BJX sing 131 n n 
C16 N1 BJX sing 132 n n 
C16 C17 BJX sing 133 n n 
C N BJX sing 134 n n 
C C2 BJX sing 135 n n 
C14 C10 BJX doub 136 n y 
C6 C10 BJX sing 137 n y 
C6 N BJX sing 138 n n 
N C1 BJX sing 139 n n 
C2 C4 BJX sing 140 n n 
O1 C21 BJX sing 141 n n 
C19 C21 BJX doub 142 n y 
C19 C18 BJX sing 143 n y 
C17 C18 BJX sing 144 n n 
C21 C23 BJX sing 145 n y 
C18 C20 BJX doub 146 n y 
C4 C3 BJX sing 147 n n 
C1 C3 BJX sing 148 n n 
O2 C24 BJX doub 149 n n 
C20 C22 BJX sing 150 n y 
C23 C24 BJX sing 151 n n 
C23 C22 BJX doub 152 n y 
C24 O3 BJX sing 153 n n 
C9 H1 BJX sing 154 n n 
C10 H2 BJX sing 155 n n 
C11 H3 BJX sing 156 n n 
C12 H4 BJX sing 157 n n 
C12 H5 BJX sing 158 n n 
C12 H6 BJX sing 159 n n 
C13 H7 BJX sing 160 n n 
C13 H8 BJX sing 161 n n 
C13 H9 BJX sing 162 n n 
C14 H10 BJX sing 163 n n 
C15 H11 BJX sing 164 n n 
C17 H12 BJX sing 165 n n 
C17 H13 BJX sing 166 n n 
C19 H14 BJX sing 167 n n 
C20 H15 BJX sing 168 n n 
C8 H16 BJX sing 169 n n 
C8 H17 BJX sing 170 n n 
C5 H18 BJX sing 171 n n 
C4 H19 BJX sing 172 n n 
C4 H20 BJX sing 173 n n 
C3 H21 BJX sing 174 n n 
C3 H22 BJX sing 175 n n 
C2 H23 BJX sing 176 n n 
C2 H24 BJX sing 177 n n 
C1 H25 BJX sing 178 n n 
C1 H26 BJX sing 179 n n 
C H27 BJX sing 180 n n 
C H28 BJX sing 181 n n 
C22 H29 BJX sing 182 n n 
C25 H30 BJX sing 183 n n 
C25 H31 BJX sing 184 n n 
C26 H32 BJX sing 185 n n 
C26 H33 BJX sing 186 n n 
C26 H34 BJX sing 187 n n 
N1 H35 BJX sing 188 n n 
O3 H36 BJX sing 189 n n 
#
_atom_sites.entry_id                     6PZ9 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 BJX C 1 1601 1601 BJX RPG . 
D 4 ATP C 1 1602 2 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C9 BJX . . . C 3 226.942 140.386 211.227 0 0 0 C9 BJX 1601 C 1 
HETATM 2 C C10 BJX . . . C 3 222.545 143.363 212.193 0 0 0 C10 BJX 1601 C 1 
HETATM 3 C C11 BJX . . . C 3 223.817 142.674 209.882 0 0 0 C11 BJX 1601 C 1 
HETATM 4 C C12 BJX . . . C 3 228.023 139.694 212.033 0 0 0 C12 BJX 1601 C 1 
HETATM 5 C C13 BJX . . . C 3 225.66 139.562 211.195 0 0 0 C13 BJX 1601 C 1 
HETATM 6 C C14 BJX . . . C 3 221.828 143.136 211.038 0 0 0 C14 BJX 1601 C 1 
HETATM 7 C C15 BJX . . . C 3 222.459 142.803 209.872 0 0 0 C15 BJX 1601 C 1 
HETATM 8 C C16 BJX . . . C 3 227.529 144.912 211.002 0 0 0 C16 BJX 1601 C 1 
HETATM 9 C C17 BJX . . . C 3 227.636 146.271 210.308 0 0 0 C17 BJX 1601 C 1 
HETATM 10 C C18 BJX . . . C 3 226.242 146.716 209.863 0 0 0 C18 BJX 1601 C 1 
HETATM 11 C C19 BJX . . . C 3 225.891 146.837 208.527 0 0 0 C19 BJX 1601 C 1 
HETATM 12 C C20 BJX . . . C 3 225.3 146.993 210.833 0 0 0 C20 BJX 1601 C 1 
HETATM 13 C C8 BJX . . . C 3 226.743 141.787 211.795 0 0 0 C8 BJX 1601 C 1 
HETATM 14 C C7 BJX . . . C 3 224.544 142.876 211.033 0 0 0 C7 BJX 1601 C 1 
HETATM 15 C C6 BJX . . . C 3 223.921 143.247 212.231 0 0 0 C6 BJX 1601 C 1 
HETATM 16 C C5 BJX . . . C 3 226.031 142.682 210.773 0 0 0 C5 BJX 1601 C 1 
HETATM 17 C C4 BJX . . . C 3 225.787 144.212 216.051 0 0 0 C4 BJX 1601 C 1 
HETATM 18 C C3 BJX . . . C 3 224.548 143.377 216.02 0 0 0 C3 BJX 1601 C 1 
HETATM 19 C C2 BJX . . . C 3 226.446 144.412 214.729 0 0 0 C2 BJX 1601 C 1 
HETATM 20 C C1 BJX . . . C 3 223.73 143.445 214.726 0 0 0 C1 BJX 1601 C 1 
HETATM 21 O O1 BJX . . . C 3 224.16 147.399 206.883 0 0 0 O1 BJX 1601 C 1 
HETATM 22 O O2 BJX . . . C 3 221.304 147.198 208.999 0 0 0 O2 BJX 1601 C 1 
HETATM 23 N N BJX . . . C 3 224.595 143.495 213.521 0 0 0 N BJX 1601 C 1 
HETATM 24 C C BJX . . . C 3 225.406 144.725 213.66 0 0 0 C BJX 1601 C 1 
HETATM 25 O O BJX . . . C 3 228.207 144.632 211.928 0 0 0 O BJX 1601 C 1 
HETATM 26 C C21 BJX . . . C 3 224.603 147.234 208.192 0 0 0 C21 BJX 1601 C 1 
HETATM 27 C C22 BJX . . . C 3 224.017 147.38 210.493 0 0 0 C22 BJX 1601 C 1 
HETATM 28 C C23 BJX . . . C 3 223.681 147.502 209.166 0 0 0 C23 BJX 1601 C 1 
HETATM 29 C C24 BJX . . . C 3 222.285 147.935 208.754 0 0 0 C24 BJX 1601 C 1 
HETATM 30 C C25 BJX . . . C 3 224.362 146.352 205.998 0 0 0 C25 BJX 1601 C 1 
HETATM 31 C C26 BJX . . . C 3 223.832 146.822 204.645 0 0 0 C26 BJX 1601 C 1 
HETATM 32 N N1 BJX . . . C 3 226.518 144.026 210.464 0 0 0 N1 BJX 1601 C 1 
HETATM 33 O O3 BJX . . . C 3 222.107 149.024 208.155 0 0 0 O3 BJX 1601 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    39 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           33 
#