data_6PZA
#
_model_server_result.job_id            hfTXTefeCwFYaxpUZaenGg 
_model_server_result.datetime_utc      '2024-11-23 14:26:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6pza 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1602}' 
#
_entry.id    6PZA 
#
_exptl.entry_id    6PZA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6PZA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6PZA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             6 
_struct_conn.ptnr1_auth_asym_id             C 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              6 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             26 
_struct_conn.ptnr2_auth_asym_id             C 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              26 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.02 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     6PZA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GBM C 1 1601 1 GBM GBM . 
D 4 ATP C 1 1602 1 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . D 4 194.6 297.771 170.021 1 127.48 0 PG ATP 1602 C 1 
HETATM 2 O O1G ATP . . . D 4 193.971 298.906 169.258 1 127.48 -1 O1G ATP 1602 C 1 
HETATM 3 O O2G ATP . . . D 4 194.895 296.557 169.183 1 127.48 -1 O2G ATP 1602 C 1 
HETATM 4 O O3G ATP . . . D 4 195.698 298.168 170.972 1 127.48 0 O3G ATP 1602 C 1 
HETATM 5 P PB ATP . . . D 4 192.045 296.822 170.281 1 127.48 0 PB ATP 1602 C 1 
HETATM 6 O O1B ATP . . . D 4 191.792 297.751 169.123 1 127.48 -1 O1B ATP 1602 C 1 
HETATM 7 O O2B ATP . . . D 4 192.084 295.332 170.059 1 127.48 0 O2B ATP 1602 C 1 
HETATM 8 O O3B ATP . . . D 4 193.412 297.281 170.974 1 127.48 0 O3B ATP 1602 C 1 
HETATM 9 P PA ATP . . . D 4 189.425 296.959 171.06 1 127.48 0 PA ATP 1602 C 1 
HETATM 10 O O1A ATP . . . D 4 189.073 295.493 171.142 1 127.48 -1 O1A ATP 1602 C 1 
HETATM 11 O O2A ATP . . . D 4 189.233 297.728 169.786 1 127.48 0 O2A ATP 1602 C 1 
HETATM 12 O O3A ATP . . . D 4 190.971 297.137 171.426 1 127.48 0 O3A ATP 1602 C 1 
HETATM 13 O O5' ATP . . . D 4 188.702 297.794 172.232 1 127.48 0 O5' ATP 1602 C 1 
HETATM 14 C C5' ATP . . . D 4 187.404 298.353 172.017 1 127.48 0 C5' ATP 1602 C 1 
HETATM 15 C C4' ATP . . . D 4 186.949 299.082 173.27 1 127.48 0 C4' ATP 1602 C 1 
HETATM 16 O O4' ATP . . . D 4 186.522 298.141 174.244 1 127.48 0 O4' ATP 1602 C 1 
HETATM 17 C C3' ATP . . . D 4 188.091 299.888 173.847 1 127.48 0 C3' ATP 1602 C 1 
HETATM 18 O O3' ATP . . . D 4 187.745 301.274 173.809 1 127.48 0 O3' ATP 1602 C 1 
HETATM 19 C C2' ATP . . . D 4 188.215 299.428 175.28 1 127.48 0 C2' ATP 1602 C 1 
HETATM 20 O O2' ATP . . . D 4 188.097 300.549 176.161 1 127.48 0 O2' ATP 1602 C 1 
HETATM 21 C C1' ATP . . . D 4 187.073 298.458 175.513 1 127.48 0 C1' ATP 1602 C 1 
HETATM 22 N N9 ATP . . . D 4 187.628 297.191 176.015 1 127.48 0 N9 ATP 1602 C 1 
HETATM 23 C C8 ATP . . . D 4 187.839 296.117 175.24 1 127.48 0 C8 ATP 1602 C 1 
HETATM 24 N N7 ATP . . . D 4 188.341 295.091 175.964 1 127.48 0 N7 ATP 1602 C 1 
HETATM 25 C C5 ATP . . . D 4 188.441 295.509 177.233 1 127.48 0 C5 ATP 1602 C 1 
HETATM 26 C C6 ATP . . . D 4 188.895 294.917 178.505 1 127.48 0 C6 ATP 1602 C 1 
HETATM 27 N N6 ATP . . . D 4 189.351 293.644 178.557 1 127.48 0 N6 ATP 1602 C 1 
HETATM 28 N N1 ATP . . . D 4 188.841 295.697 179.606 1 127.48 0 N1 ATP 1602 C 1 
HETATM 29 C C2 ATP . . . D 4 188.393 296.966 179.561 1 127.48 0 C2 ATP 1602 C 1 
HETATM 30 N N3 ATP . . . D 4 187.966 297.565 178.439 1 127.48 0 N3 ATP 1602 C 1 
HETATM 31 C C4 ATP . . . D 4 187.961 296.895 177.266 1 127.48 0 C4 ATP 1602 C 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           31 
#