data_6PZR # _model_server_result.job_id HTZiYszQFwyVRXMzCHRTxw _model_server_result.datetime_utc '2024-12-27 01:24:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pzr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":808}' # _entry.id 6PZR # _exptl.entry_id 6PZR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PZR _cell.length_a 75.883 _cell.length_b 97.364 _cell.length_c 97.642 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PZR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,X 1 1 B,N,O,P,Q,R,S,T,U,V,W,Y 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 K N N ? 6 L N N ? 6 M N N ? 6 U N N ? 6 V N N ? 6 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 170 A ASP 610 1_555 D K K . A K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.977 ? metalc ? metalc2 A OD1 ASP 170 A ASP 610 1_555 D K K . A K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc3 A OD1 ASP 172 A ASP 612 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc4 A O ASP 172 A ASP 612 1_555 D K K . A K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc5 A ND1 HIS 174 A HIS 614 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc6 A O HIS 174 A HIS 614 1_555 D K K . A K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc7 A O PHE 183 A PHE 623 1_555 E K K . A K 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? metalc ? metalc8 A O ASP 186 A ASP 626 1_555 E K K . A K 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc9 A O VAL 189 A VAL 629 1_555 E K K . A K 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? metalc ? metalc10 A OG SER 193 A SER 633 1_555 D K K . A K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.813 ? metalc ? metalc11 A O LEU 194 A LEU 634 1_555 D K K . A K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? metalc ? metalc12 A O TYR 222 A TYR 662 1_555 E K K . A K 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? metalc ? metalc13 A OD2 ASP 265 A ASP 705 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc14 C ZN ZN . A ZN 801 1_555 F N22 P7D . A P7D 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc15 C ZN ZN . A ZN 801 1_555 F O21 P7D . A P7D 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc16 C ZN ZN . A ZN 801 1_555 F O23 P7D . A P7D 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? metalc ? metalc17 E K K . A K 803 1_555 X O HOH . A HOH 931 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.217 ? metalc ? metalc18 E K K . A K 803 1_555 X O HOH . A HOH 940 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? metalc ? metalc19 B O ASP 170 B ASP 610 1_555 O K K . B K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.013 ? metalc ? metalc20 B OD2 ASP 170 B ASP 610 1_555 O K K . B K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.936 ? metalc ? metalc21 B OD1 ASP 172 B ASP 612 1_555 N ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc22 B O ASP 172 B ASP 612 1_555 O K K . B K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc23 B ND1 HIS 174 B HIS 614 1_555 N ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc24 B O HIS 174 B HIS 614 1_555 O K K . B K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc25 B O PHE 183 B PHE 623 1_555 P K K . B K 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? metalc ? metalc26 B O ASP 186 B ASP 626 1_555 P K K . B K 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.074 ? metalc ? metalc27 B O VAL 189 B VAL 629 1_555 P K K . B K 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? metalc ? metalc28 B OG SER 193 B SER 633 1_555 O K K . B K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.023 ? metalc ? metalc29 B O LEU 194 B LEU 634 1_555 O K K . B K 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.804 ? metalc ? metalc30 B O TYR 222 B TYR 662 1_555 P K K . B K 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc31 B OD2 ASP 265 B ASP 705 1_555 N ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc32 N ZN ZN . B ZN 801 1_555 Q N22 P7D . B P7D 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc33 N ZN ZN . B ZN 801 1_555 Q O21 P7D . B P7D 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc34 N ZN ZN . B ZN 801 1_555 Q O23 P7D . B P7D 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? metalc ? metalc35 P K K . B K 803 1_555 Y O HOH . B HOH 914 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.455 ? metalc ? metalc36 P K K . B K 803 1_555 Y O HOH . B HOH 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6PZR _atom_sites.fract_transf_matrix[1][1] 0.013178 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010271 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010241 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 801 1 ZN ZN . D 3 K A 1 802 1 K K . E 3 K A 1 803 2 K K . F 4 P7D A 1 804 2 P7D LIG . G 5 EDO A 1 805 1 EDO EDO . H 5 EDO A 1 806 2 EDO EDO . I 5 EDO A 1 807 3 EDO EDO . J 6 IOD A 1 808 1 IOD IOD . K 6 IOD A 1 809 4 IOD IOD . L 6 IOD A 1 810 5 IOD IOD . M 6 IOD A 1 811 6 IOD IOD . N 2 ZN B 1 801 2 ZN ZN . O 3 K B 1 802 3 K K . P 3 K B 1 803 4 K K . Q 4 P7D B 1 804 1 P7D LIG . R 5 EDO B 1 805 4 EDO EDO . S 5 EDO B 1 806 5 EDO EDO . T 5 EDO B 1 807 6 EDO EDO . U 6 IOD B 1 808 2 IOD IOD . V 6 IOD B 1 809 3 IOD IOD . W 6 IOD B 1 810 7 IOD IOD . X 7 HOH A 1 901 135 HOH HOH . X 7 HOH A 2 902 159 HOH HOH . X 7 HOH A 3 903 13 HOH HOH . X 7 HOH A 4 904 55 HOH HOH . X 7 HOH A 5 905 29 HOH HOH . X 7 HOH A 6 906 72 HOH HOH . X 7 HOH A 7 907 25 HOH HOH . X 7 HOH A 8 908 33 HOH HOH . X 7 HOH A 9 909 127 HOH HOH . X 7 HOH A 10 910 157 HOH HOH . X 7 HOH A 11 911 106 HOH HOH . X 7 HOH A 12 912 24 HOH HOH . X 7 HOH A 13 913 128 HOH HOH . X 7 HOH A 14 914 161 HOH HOH . X 7 HOH A 15 915 17 HOH HOH . X 7 HOH A 16 916 78 HOH HOH . X 7 HOH A 17 917 27 HOH HOH . X 7 HOH A 18 918 30 HOH HOH . X 7 HOH A 19 919 15 HOH HOH . X 7 HOH A 20 920 48 HOH HOH . X 7 HOH A 21 921 86 HOH HOH . X 7 HOH A 22 922 19 HOH HOH . X 7 HOH A 23 923 11 HOH HOH . X 7 HOH A 24 924 32 HOH HOH . X 7 HOH A 25 925 81 HOH HOH . X 7 HOH A 26 926 103 HOH HOH . X 7 HOH A 27 927 145 HOH HOH . X 7 HOH A 28 928 131 HOH HOH . X 7 HOH A 29 929 45 HOH HOH . X 7 HOH A 30 930 31 HOH HOH . X 7 HOH A 31 931 34 HOH HOH . X 7 HOH A 32 932 50 HOH HOH . X 7 HOH A 33 933 53 HOH HOH . X 7 HOH A 34 934 64 HOH HOH . X 7 HOH A 35 935 118 HOH HOH . X 7 HOH A 36 936 22 HOH HOH . X 7 HOH A 37 937 138 HOH HOH . X 7 HOH A 38 938 173 HOH HOH . X 7 HOH A 39 939 148 HOH HOH . X 7 HOH A 40 940 35 HOH HOH . X 7 HOH A 41 941 125 HOH HOH . X 7 HOH A 42 942 59 HOH HOH . X 7 HOH A 43 943 26 HOH HOH . X 7 HOH A 44 944 142 HOH HOH . X 7 HOH A 45 945 137 HOH HOH . X 7 HOH A 46 946 71 HOH HOH . X 7 HOH A 47 947 44 HOH HOH . X 7 HOH A 48 948 36 HOH HOH . X 7 HOH A 49 949 88 HOH HOH . X 7 HOH A 50 950 101 HOH HOH . X 7 HOH A 51 951 130 HOH HOH . X 7 HOH A 52 952 112 HOH HOH . X 7 HOH A 53 953 107 HOH HOH . X 7 HOH A 54 954 167 HOH HOH . X 7 HOH A 55 955 156 HOH HOH . X 7 HOH A 56 956 49 HOH HOH . X 7 HOH A 57 957 158 HOH HOH . X 7 HOH A 58 958 62 HOH HOH . X 7 HOH A 59 959 132 HOH HOH . X 7 HOH A 60 960 170 HOH HOH . X 7 HOH A 61 961 179 HOH HOH . X 7 HOH A 62 962 153 HOH HOH . X 7 HOH A 63 963 169 HOH HOH . X 7 HOH A 64 964 8 HOH HOH . X 7 HOH A 65 965 150 HOH HOH . X 7 HOH A 66 966 61 HOH HOH . X 7 HOH A 67 967 140 HOH HOH . X 7 HOH A 68 968 95 HOH HOH . X 7 HOH A 69 969 91 HOH HOH . X 7 HOH A 70 970 168 HOH HOH . X 7 HOH A 71 971 160 HOH HOH . X 7 HOH A 72 972 104 HOH HOH . X 7 HOH A 73 973 73 HOH HOH . X 7 HOH A 74 974 102 HOH HOH . X 7 HOH A 75 975 152 HOH HOH . Y 7 HOH B 1 901 155 HOH HOH . Y 7 HOH B 2 902 166 HOH HOH . Y 7 HOH B 3 903 174 HOH HOH . Y 7 HOH B 4 904 177 HOH HOH . Y 7 HOH B 5 905 117 HOH HOH . Y 7 HOH B 6 906 163 HOH HOH . Y 7 HOH B 7 907 98 HOH HOH . Y 7 HOH B 8 908 9 HOH HOH . Y 7 HOH B 9 909 120 HOH HOH . Y 7 HOH B 10 910 52 HOH HOH . Y 7 HOH B 11 911 85 HOH HOH . Y 7 HOH B 12 912 70 HOH HOH . Y 7 HOH B 13 913 42 HOH HOH . Y 7 HOH B 14 914 16 HOH HOH . Y 7 HOH B 15 915 58 HOH HOH . Y 7 HOH B 16 916 65 HOH HOH . Y 7 HOH B 17 917 110 HOH HOH . Y 7 HOH B 18 918 108 HOH HOH . Y 7 HOH B 19 919 133 HOH HOH . Y 7 HOH B 20 920 124 HOH HOH . Y 7 HOH B 21 921 109 HOH HOH . Y 7 HOH B 22 922 143 HOH HOH . Y 7 HOH B 23 923 87 HOH HOH . Y 7 HOH B 24 924 69 HOH HOH . Y 7 HOH B 25 925 180 HOH HOH . Y 7 HOH B 26 926 38 HOH HOH . Y 7 HOH B 27 927 63 HOH HOH . Y 7 HOH B 28 928 144 HOH HOH . Y 7 HOH B 29 929 20 HOH HOH . Y 7 HOH B 30 930 111 HOH HOH . Y 7 HOH B 31 931 14 HOH HOH . Y 7 HOH B 32 932 116 HOH HOH . Y 7 HOH B 33 933 119 HOH HOH . Y 7 HOH B 34 934 115 HOH HOH . Y 7 HOH B 35 935 39 HOH HOH . Y 7 HOH B 36 936 82 HOH HOH . Y 7 HOH B 37 937 21 HOH HOH . Y 7 HOH B 38 938 147 HOH HOH . Y 7 HOH B 39 939 134 HOH HOH . Y 7 HOH B 40 940 99 HOH HOH . Y 7 HOH B 41 941 83 HOH HOH . Y 7 HOH B 42 942 113 HOH HOH . Y 7 HOH B 43 943 114 HOH HOH . Y 7 HOH B 44 944 57 HOH HOH . Y 7 HOH B 45 945 162 HOH HOH . Y 7 HOH B 46 946 74 HOH HOH . Y 7 HOH B 47 947 141 HOH HOH . Y 7 HOH B 48 948 54 HOH HOH . Y 7 HOH B 49 949 178 HOH HOH . Y 7 HOH B 50 950 43 HOH HOH . Y 7 HOH B 51 951 46 HOH HOH . Y 7 HOH B 52 952 84 HOH HOH . Y 7 HOH B 53 953 56 HOH HOH . Y 7 HOH B 54 954 47 HOH HOH . Y 7 HOH B 55 955 151 HOH HOH . Y 7 HOH B 56 956 66 HOH HOH . Y 7 HOH B 57 957 18 HOH HOH . Y 7 HOH B 58 958 122 HOH HOH . Y 7 HOH B 59 959 126 HOH HOH . Y 7 HOH B 60 960 80 HOH HOH . Y 7 HOH B 61 961 77 HOH HOH . Y 7 HOH B 62 962 79 HOH HOH . Y 7 HOH B 63 963 165 HOH HOH . Y 7 HOH B 64 964 76 HOH HOH . Y 7 HOH B 65 965 37 HOH HOH . Y 7 HOH B 66 966 136 HOH HOH . Y 7 HOH B 67 967 139 HOH HOH . Y 7 HOH B 68 968 171 HOH HOH . Y 7 HOH B 69 969 164 HOH HOH . Y 7 HOH B 70 970 172 HOH HOH . Y 7 HOH B 71 971 41 HOH HOH . Y 7 HOH B 72 972 123 HOH HOH . Y 7 HOH B 73 973 60 HOH HOH . Y 7 HOH B 74 974 10 HOH HOH . Y 7 HOH B 75 975 146 HOH HOH . Y 7 HOH B 76 976 40 HOH HOH . Y 7 HOH B 77 977 89 HOH HOH . Y 7 HOH B 78 978 105 HOH HOH . Y 7 HOH B 79 979 67 HOH HOH . Y 7 HOH B 80 980 176 HOH HOH . Y 7 HOH B 81 981 100 HOH HOH . Y 7 HOH B 82 982 154 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id U _atom_site.label_entity_id 6 _atom_site.Cartn_x 81.45 _atom_site.Cartn_y 48.64 _atom_site.Cartn_z 64.865 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 808 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #