data_6PZV # _model_server_result.job_id uUA7Lx1B-44zrpQokBOLFA _model_server_result.datetime_utc '2024-11-04 20:37:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6pzv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":601}' # _entry.id 6PZV # _exptl.entry_id 6PZV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6PZV _cell.length_a 70.322 _cell.length_b 196.445 _cell.length_c 67.703 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6PZV _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,L,M,N 1 1 E,F,G,H,K,O,P,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 77 B CYS 76 1_555 D SG CYS 18 D CYS 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 F SG CYS 77 F CYS 76 1_555 H SG CYS 18 H CYS 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? covale ? covale1 D C ARG 8 D ARG 8 1_555 D N M3L 9 D M3L 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 D C M3L 9 D M3L 9 1_555 D N SER 10 D SER 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 H C ARG 8 H ARG 8 1_555 H N M3L 9 H M3L 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 H C M3L 9 H M3L 9 1_555 H N SER 10 H SER 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? metalc ? metalc1 C SG CYS 4 C CYS 351 1_555 J ZN ZN . C ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc2 C SG CYS 7 C CYS 354 1_555 J ZN ZN . C ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc3 C SG CYS 65 C CYS 412 1_555 J ZN ZN . C ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.873 ? metalc ? metalc4 C ND1 HIS 69 C HIS 416 1_555 J ZN ZN . C ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc5 G SG CYS 4 G CYS 351 1_555 K ZN ZN . G ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc6 G SG CYS 7 G CYS 354 1_555 K ZN ZN . G ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc7 G SG CYS 65 G CYS 412 1_555 K ZN ZN . G ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc8 G ND1 HIS 69 G HIS 416 1_555 K ZN ZN . G ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6PZV _atom_sites.fract_transf_matrix[1][1] 0.01422 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00509 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01477 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 4 FLC C 1 601 1 FLC CIT . J 5 ZN C 1 602 1 ZN ZN . K 5 ZN G 1 601 1 ZN ZN . L 6 HOH A 1 101 81 HOH HOH . L 6 HOH A 2 102 46 HOH HOH . M 6 HOH B 1 101 48 HOH HOH . M 6 HOH B 2 102 64 HOH HOH . N 6 HOH C 1 701 31 HOH HOH . N 6 HOH C 2 702 65 HOH HOH . N 6 HOH C 3 703 59 HOH HOH . N 6 HOH C 4 704 63 HOH HOH . N 6 HOH C 5 705 55 HOH HOH . N 6 HOH C 6 706 22 HOH HOH . N 6 HOH C 7 707 32 HOH HOH . N 6 HOH C 8 708 50 HOH HOH . N 6 HOH C 9 709 3 HOH HOH . N 6 HOH C 10 710 7 HOH HOH . N 6 HOH C 11 711 4 HOH HOH . N 6 HOH C 12 712 16 HOH HOH . N 6 HOH C 13 713 80 HOH HOH . N 6 HOH C 14 714 58 HOH HOH . O 6 HOH E 1 101 15 HOH HOH . O 6 HOH E 2 102 66 HOH HOH . O 6 HOH E 3 103 52 HOH HOH . O 6 HOH E 4 104 41 HOH HOH . O 6 HOH E 5 105 35 HOH HOH . O 6 HOH E 6 106 21 HOH HOH . O 6 HOH E 7 107 36 HOH HOH . O 6 HOH E 8 108 25 HOH HOH . P 6 HOH F 1 101 57 HOH HOH . P 6 HOH F 2 102 18 HOH HOH . Q 6 HOH G 1 701 54 HOH HOH . Q 6 HOH G 2 702 56 HOH HOH . Q 6 HOH G 3 703 2 HOH HOH . Q 6 HOH G 4 704 37 HOH HOH . Q 6 HOH G 5 705 38 HOH HOH . Q 6 HOH G 6 706 45 HOH HOH . Q 6 HOH G 7 707 1 HOH HOH . Q 6 HOH G 8 708 5 HOH HOH . Q 6 HOH G 9 709 47 HOH HOH . Q 6 HOH G 10 710 30 HOH HOH . Q 6 HOH G 11 711 11 HOH HOH . Q 6 HOH G 12 712 6 HOH HOH . Q 6 HOH G 13 713 44 HOH HOH . Q 6 HOH G 14 714 14 HOH HOH . Q 6 HOH G 15 715 49 HOH HOH . Q 6 HOH G 16 716 51 HOH HOH . Q 6 HOH G 17 717 68 HOH HOH . Q 6 HOH G 18 718 78 HOH HOH . Q 6 HOH G 19 719 8 HOH HOH . R 6 HOH H 1 101 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . I 4 20.8 31.793 70.265 1 67.28 ? CAC FLC 601 C 1 HETATM 2 C CA FLC . . . I 4 21.957 32.763 70.264 1 69.28 ? CA FLC 601 C 1 HETATM 3 C CB FLC . . . I 4 22.564 32.799 71.661 1 75.37 ? CB FLC 601 C 1 HETATM 4 C CBC FLC . . . I 4 23.237 31.459 71.899 1 89.14 ? CBC FLC 601 C 1 HETATM 5 C CG FLC . . . I 4 23.622 33.892 71.78 1 76.7 ? CG FLC 601 C 1 HETATM 6 C CGC FLC . . . I 4 23.114 35.043 72.618 1 67.78 ? CGC FLC 601 C 1 HETATM 7 O OA1 FLC . . . I 4 20.955 30.604 69.908 1 62.37 ? OA1 FLC 601 C 1 HETATM 8 O OA2 FLC . . . I 4 19.664 32.169 70.621 1 73.19 ? OA2 FLC 601 C 1 HETATM 9 O OB1 FLC . . . I 4 23.839 30.879 70.971 1 93.17 ? OB1 FLC 601 C 1 HETATM 10 O OB2 FLC . . . I 4 23.19 30.921 73.026 1 97.61 ? OB2 FLC 601 C 1 HETATM 11 O OG1 FLC . . . I 4 22.061 35.641 72.315 1 68.36 ? OG1 FLC 601 C 1 HETATM 12 O OG2 FLC . . . I 4 23.75 35.42 73.626 1 56.57 ? OG2 FLC 601 C 1 HETATM 13 O OHB FLC . . . I 4 21.511 33.005 72.635 1 73.98 ? OHB FLC 601 C 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #