data_6Q0A # _model_server_result.job_id 6Wbe1RX0NY13y2AwEDoWRg _model_server_result.datetime_utc '2024-11-02 17:19:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6q0a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6Q0A # _exptl.entry_id 6Q0A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Q0A _cell.length_a 139.409 _cell.length_b 139.409 _cell.length_c 139.409 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q0A _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -139.409 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -139.409 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6Q0A _atom_sites.fract_transf_matrix[1][1] 0.007173 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007173 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007173 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 501 1 EDO EDO . C 3 EPZ A 1 502 1 EPZ EPZ . D 4 HOH A 1 601 281 HOH HOH . D 4 HOH A 2 602 326 HOH HOH . D 4 HOH A 3 603 271 HOH HOH . D 4 HOH A 4 604 268 HOH HOH . D 4 HOH A 5 605 273 HOH HOH . D 4 HOH A 6 606 227 HOH HOH . D 4 HOH A 7 607 275 HOH HOH . D 4 HOH A 8 608 131 HOH HOH . D 4 HOH A 9 609 261 HOH HOH . D 4 HOH A 10 610 317 HOH HOH . D 4 HOH A 11 611 88 HOH HOH . D 4 HOH A 12 612 102 HOH HOH . D 4 HOH A 13 613 209 HOH HOH . D 4 HOH A 14 614 264 HOH HOH . D 4 HOH A 15 615 28 HOH HOH . D 4 HOH A 16 616 203 HOH HOH . D 4 HOH A 17 617 145 HOH HOH . D 4 HOH A 18 618 307 HOH HOH . D 4 HOH A 19 619 262 HOH HOH . D 4 HOH A 20 620 65 HOH HOH . D 4 HOH A 21 621 270 HOH HOH . D 4 HOH A 22 622 100 HOH HOH . D 4 HOH A 23 623 171 HOH HOH . D 4 HOH A 24 624 61 HOH HOH . D 4 HOH A 25 625 15 HOH HOH . D 4 HOH A 26 626 58 HOH HOH . D 4 HOH A 27 627 136 HOH HOH . D 4 HOH A 28 628 313 HOH HOH . D 4 HOH A 29 629 81 HOH HOH . D 4 HOH A 30 630 274 HOH HOH . D 4 HOH A 31 631 155 HOH HOH . D 4 HOH A 32 632 95 HOH HOH . D 4 HOH A 33 633 182 HOH HOH . D 4 HOH A 34 634 149 HOH HOH . D 4 HOH A 35 635 147 HOH HOH . D 4 HOH A 36 636 98 HOH HOH . D 4 HOH A 37 637 14 HOH HOH . D 4 HOH A 38 638 207 HOH HOH . D 4 HOH A 39 639 54 HOH HOH . D 4 HOH A 40 640 183 HOH HOH . D 4 HOH A 41 641 49 HOH HOH . D 4 HOH A 42 642 2 HOH HOH . D 4 HOH A 43 643 48 HOH HOH . D 4 HOH A 44 644 107 HOH HOH . D 4 HOH A 45 645 297 HOH HOH . D 4 HOH A 46 646 257 HOH HOH . D 4 HOH A 47 647 322 HOH HOH . D 4 HOH A 48 648 170 HOH HOH . D 4 HOH A 49 649 117 HOH HOH . D 4 HOH A 50 650 198 HOH HOH . D 4 HOH A 51 651 139 HOH HOH . D 4 HOH A 52 652 318 HOH HOH . D 4 HOH A 53 653 103 HOH HOH . D 4 HOH A 54 654 169 HOH HOH . D 4 HOH A 55 655 20 HOH HOH . D 4 HOH A 56 656 106 HOH HOH . D 4 HOH A 57 657 29 HOH HOH . D 4 HOH A 58 658 119 HOH HOH . D 4 HOH A 59 659 8 HOH HOH . D 4 HOH A 60 660 212 HOH HOH . D 4 HOH A 61 661 71 HOH HOH . D 4 HOH A 62 662 180 HOH HOH . D 4 HOH A 63 663 236 HOH HOH . D 4 HOH A 64 664 12 HOH HOH . D 4 HOH A 65 665 18 HOH HOH . D 4 HOH A 66 666 151 HOH HOH . D 4 HOH A 67 667 225 HOH HOH . D 4 HOH A 68 668 52 HOH HOH . D 4 HOH A 69 669 140 HOH HOH . D 4 HOH A 70 670 144 HOH HOH . D 4 HOH A 71 671 32 HOH HOH . D 4 HOH A 72 672 113 HOH HOH . D 4 HOH A 73 673 152 HOH HOH . D 4 HOH A 74 674 82 HOH HOH . D 4 HOH A 75 675 153 HOH HOH . D 4 HOH A 76 676 41 HOH HOH . D 4 HOH A 77 677 19 HOH HOH . D 4 HOH A 78 678 72 HOH HOH . D 4 HOH A 79 679 211 HOH HOH . D 4 HOH A 80 680 47 HOH HOH . D 4 HOH A 81 681 39 HOH HOH . D 4 HOH A 82 682 199 HOH HOH . D 4 HOH A 83 683 315 HOH HOH . D 4 HOH A 84 684 34 HOH HOH . D 4 HOH A 85 685 11 HOH HOH . D 4 HOH A 86 686 329 HOH HOH . D 4 HOH A 87 687 4 HOH HOH . D 4 HOH A 88 688 56 HOH HOH . D 4 HOH A 89 689 310 HOH HOH . D 4 HOH A 90 690 196 HOH HOH . D 4 HOH A 91 691 62 HOH HOH . D 4 HOH A 92 692 51 HOH HOH . D 4 HOH A 93 693 77 HOH HOH . D 4 HOH A 94 694 40 HOH HOH . D 4 HOH A 95 695 70 HOH HOH . D 4 HOH A 96 696 130 HOH HOH . D 4 HOH A 97 697 55 HOH HOH . D 4 HOH A 98 698 84 HOH HOH . D 4 HOH A 99 699 36 HOH HOH . D 4 HOH A 100 700 213 HOH HOH . D 4 HOH A 101 701 167 HOH HOH . D 4 HOH A 102 702 79 HOH HOH . D 4 HOH A 103 703 99 HOH HOH . D 4 HOH A 104 704 76 HOH HOH . D 4 HOH A 105 705 216 HOH HOH . D 4 HOH A 106 706 141 HOH HOH . D 4 HOH A 107 707 194 HOH HOH . D 4 HOH A 108 708 177 HOH HOH . D 4 HOH A 109 709 30 HOH HOH . D 4 HOH A 110 710 133 HOH HOH . D 4 HOH A 111 711 91 HOH HOH . D 4 HOH A 112 712 27 HOH HOH . D 4 HOH A 113 713 60 HOH HOH . D 4 HOH A 114 714 110 HOH HOH . D 4 HOH A 115 715 104 HOH HOH . D 4 HOH A 116 716 226 HOH HOH . D 4 HOH A 117 717 296 HOH HOH . D 4 HOH A 118 718 23 HOH HOH . D 4 HOH A 119 719 64 HOH HOH . D 4 HOH A 120 720 22 HOH HOH . D 4 HOH A 121 721 17 HOH HOH . D 4 HOH A 122 722 38 HOH HOH . D 4 HOH A 123 723 105 HOH HOH . D 4 HOH A 124 724 181 HOH HOH . D 4 HOH A 125 725 86 HOH HOH . D 4 HOH A 126 726 13 HOH HOH . D 4 HOH A 127 727 127 HOH HOH . D 4 HOH A 128 728 5 HOH HOH . D 4 HOH A 129 729 174 HOH HOH . D 4 HOH A 130 730 35 HOH HOH . D 4 HOH A 131 731 109 HOH HOH . D 4 HOH A 132 732 222 HOH HOH . D 4 HOH A 133 733 63 HOH HOH . D 4 HOH A 134 734 195 HOH HOH . D 4 HOH A 135 735 121 HOH HOH . D 4 HOH A 136 736 300 HOH HOH . D 4 HOH A 137 737 298 HOH HOH . D 4 HOH A 138 738 93 HOH HOH . D 4 HOH A 139 739 173 HOH HOH . D 4 HOH A 140 740 309 HOH HOH . D 4 HOH A 141 741 75 HOH HOH . D 4 HOH A 142 742 306 HOH HOH . D 4 HOH A 143 743 165 HOH HOH . D 4 HOH A 144 744 193 HOH HOH . D 4 HOH A 145 745 80 HOH HOH . D 4 HOH A 146 746 42 HOH HOH . D 4 HOH A 147 747 21 HOH HOH . D 4 HOH A 148 748 92 HOH HOH . D 4 HOH A 149 749 53 HOH HOH . D 4 HOH A 150 750 304 HOH HOH . D 4 HOH A 151 751 150 HOH HOH . D 4 HOH A 152 752 142 HOH HOH . D 4 HOH A 153 753 57 HOH HOH . D 4 HOH A 154 754 200 HOH HOH . D 4 HOH A 155 755 325 HOH HOH . D 4 HOH A 156 756 229 HOH HOH . D 4 HOH A 157 757 85 HOH HOH . D 4 HOH A 158 758 46 HOH HOH . D 4 HOH A 159 759 67 HOH HOH . D 4 HOH A 160 760 214 HOH HOH . D 4 HOH A 161 761 301 HOH HOH . D 4 HOH A 162 762 45 HOH HOH . D 4 HOH A 163 763 96 HOH HOH . D 4 HOH A 164 764 185 HOH HOH . D 4 HOH A 165 765 116 HOH HOH . D 4 HOH A 166 766 37 HOH HOH . D 4 HOH A 167 767 25 HOH HOH . D 4 HOH A 168 768 223 HOH HOH . D 4 HOH A 169 769 26 HOH HOH . D 4 HOH A 170 770 125 HOH HOH . D 4 HOH A 171 771 184 HOH HOH . D 4 HOH A 172 772 33 HOH HOH . D 4 HOH A 173 773 157 HOH HOH . D 4 HOH A 174 774 24 HOH HOH . D 4 HOH A 175 775 328 HOH HOH . D 4 HOH A 176 776 208 HOH HOH . D 4 HOH A 177 777 189 HOH HOH . D 4 HOH A 178 778 69 HOH HOH . D 4 HOH A 179 779 132 HOH HOH . D 4 HOH A 180 780 10 HOH HOH . D 4 HOH A 181 781 327 HOH HOH . D 4 HOH A 182 782 289 HOH HOH . D 4 HOH A 183 783 122 HOH HOH . D 4 HOH A 184 784 126 HOH HOH . D 4 HOH A 185 785 59 HOH HOH . D 4 HOH A 186 786 16 HOH HOH . D 4 HOH A 187 787 97 HOH HOH . D 4 HOH A 188 788 120 HOH HOH . D 4 HOH A 189 789 66 HOH HOH . D 4 HOH A 190 790 197 HOH HOH . D 4 HOH A 191 791 308 HOH HOH . D 4 HOH A 192 792 175 HOH HOH . D 4 HOH A 193 793 115 HOH HOH . D 4 HOH A 194 794 164 HOH HOH . D 4 HOH A 195 795 143 HOH HOH . D 4 HOH A 196 796 161 HOH HOH . D 4 HOH A 197 797 6 HOH HOH . D 4 HOH A 198 798 3 HOH HOH . D 4 HOH A 199 799 137 HOH HOH . D 4 HOH A 200 800 78 HOH HOH . D 4 HOH A 201 801 118 HOH HOH . D 4 HOH A 202 802 94 HOH HOH . D 4 HOH A 203 803 7 HOH HOH . D 4 HOH A 204 804 162 HOH HOH . D 4 HOH A 205 805 158 HOH HOH . D 4 HOH A 206 806 320 HOH HOH . D 4 HOH A 207 807 319 HOH HOH . D 4 HOH A 208 808 135 HOH HOH . D 4 HOH A 209 809 166 HOH HOH . D 4 HOH A 210 810 238 HOH HOH . D 4 HOH A 211 811 311 HOH HOH . D 4 HOH A 212 812 74 HOH HOH . D 4 HOH A 213 813 314 HOH HOH . D 4 HOH A 214 814 114 HOH HOH . D 4 HOH A 215 815 160 HOH HOH . D 4 HOH A 216 816 265 HOH HOH . D 4 HOH A 217 817 253 HOH HOH . D 4 HOH A 218 818 288 HOH HOH . D 4 HOH A 219 819 299 HOH HOH . D 4 HOH A 220 820 324 HOH HOH . D 4 HOH A 221 821 221 HOH HOH . D 4 HOH A 222 822 303 HOH HOH . D 4 HOH A 223 823 243 HOH HOH . D 4 HOH A 224 824 246 HOH HOH . D 4 HOH A 225 825 312 HOH HOH . D 4 HOH A 226 826 239 HOH HOH . D 4 HOH A 227 827 263 HOH HOH . D 4 HOH A 228 828 276 HOH HOH . D 4 HOH A 229 829 83 HOH HOH . D 4 HOH A 230 830 287 HOH HOH . D 4 HOH A 231 831 260 HOH HOH . D 4 HOH A 232 832 240 HOH HOH . D 4 HOH A 233 833 90 HOH HOH . D 4 HOH A 234 834 232 HOH HOH . D 4 HOH A 235 835 269 HOH HOH . D 4 HOH A 236 836 191 HOH HOH . D 4 HOH A 237 837 259 HOH HOH . D 4 HOH A 238 838 248 HOH HOH . D 4 HOH A 239 839 255 HOH HOH . D 4 HOH A 240 840 179 HOH HOH . D 4 HOH A 241 841 190 HOH HOH . D 4 HOH A 242 842 241 HOH HOH . D 4 HOH A 243 843 242 HOH HOH . D 4 HOH A 244 844 235 HOH HOH . D 4 HOH A 245 845 256 HOH HOH . D 4 HOH A 246 846 233 HOH HOH . D 4 HOH A 247 847 252 HOH HOH . D 4 HOH A 248 848 146 HOH HOH . D 4 HOH A 249 849 294 HOH HOH . D 4 HOH A 250 850 280 HOH HOH . D 4 HOH A 251 851 188 HOH HOH . D 4 HOH A 252 852 282 HOH HOH . D 4 HOH A 253 853 245 HOH HOH . D 4 HOH A 254 854 250 HOH HOH . D 4 HOH A 255 855 295 HOH HOH . D 4 HOH A 256 856 321 HOH HOH . D 4 HOH A 257 857 251 HOH HOH . D 4 HOH A 258 858 123 HOH HOH . D 4 HOH A 259 859 267 HOH HOH . D 4 HOH A 260 860 292 HOH HOH . D 4 HOH A 261 861 316 HOH HOH . D 4 HOH A 262 862 293 HOH HOH . D 4 HOH A 263 863 73 HOH HOH . D 4 HOH A 264 864 31 HOH HOH . D 4 HOH A 265 865 302 HOH HOH . D 4 HOH A 266 866 283 HOH HOH . D 4 HOH A 267 867 272 HOH HOH . D 4 HOH A 268 868 279 HOH HOH . D 4 HOH A 269 869 228 HOH HOH . D 4 HOH A 270 870 249 HOH HOH . D 4 HOH A 271 871 305 HOH HOH . D 4 HOH A 272 872 258 HOH HOH . D 4 HOH A 273 873 247 HOH HOH . D 4 HOH A 274 874 112 HOH HOH . D 4 HOH A 275 875 230 HOH HOH . D 4 HOH A 276 876 285 HOH HOH . D 4 HOH A 277 877 284 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 -17.255 -53.393 7.726 1 30.48 ? C1 EDO 501 A 1 HETATM 2 O O1 EDO . . . B 2 -16.097 -52.645 7.409 1 24.68 ? O1 EDO 501 A 1 HETATM 3 C C2 EDO . . . B 2 -17.538 -54.302 6.562 1 34.35 ? C2 EDO 501 A 1 HETATM 4 O O2 EDO . . . B 2 -16.506 -55.294 6.462 1 29.46 ? O2 EDO 501 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #