data_6Q0H # _model_server_result.job_id TKZEgdqdTXTvgtsrgcPbdw _model_server_result.datetime_utc '2024-10-17 17:42:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6q0h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 6Q0H # _exptl.entry_id 6Q0H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.488 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NONAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Q0H _cell.length_a 52.81 _cell.length_b 70.58 _cell.length_c 200.94 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q0H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 8 A CYS 59 1_555 A SG CYS 20 A CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 A SG CYS 43 A CYS 94 1_555 A SG CYS 88 A CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 B SG CYS 103 H CYS 103 1_555 B SG CYS 108 H CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 B SG CYS 157 H CYS 157 1_555 B SG CYS 213 H CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 C SG CYS 24 L CYS 22 1_555 C SG CYS 89 L CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 C SG CYS 139 L CYS 137 1_555 C SG CYS 198 L CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A ND2 ASN 78 A ASN 129 1_555 D C1 NAG . A NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? # _chem_comp.formula 'C18 H38 O10' _chem_comp.formula_weight 414.488 _chem_comp.id 2PE _chem_comp.mon_nstd_flag . _chem_comp.name 'NONAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6Q0H _atom_sites.fract_transf_matrix[1][1] 0.018936 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004977 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG A 1 301 264 NAG NAG . E 5 PG4 A 1 302 301 PG4 1PE . F 6 2PE L 1 301 301 2PE 2PE . G 7 GOL L 1 302 501 GOL GOL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2PE . . . F 6 -18.012 14.45 62.616 1 119.17 ? O1 2PE 301 L 1 HETATM 2 C C2 2PE . . . F 6 -17.138 15.306 63.3 1 114.97 ? C2 2PE 301 L 1 HETATM 3 C C3 2PE . . . F 6 -16.719 16.454 62.383 1 114.69 ? C3 2PE 301 L 1 HETATM 4 O O4 2PE . . . F 6 -15.774 17.245 63.047 1 113.37 ? O4 2PE 301 L 1 HETATM 5 C C5 2PE . . . F 6 -15.364 18.381 62.342 1 111.55 ? C5 2PE 301 L 1 HETATM 6 C C6 2PE . . . F 6 -14.15 18.997 63.037 1 112.81 ? C6 2PE 301 L 1 HETATM 7 O O7 2PE . . . F 6 -14.568 19.876 64.045 1 112.33 ? O7 2PE 301 L 1 HETATM 8 C C8 2PE . . . F 6 -14.426 19.388 65.351 1 112.25 ? C8 2PE 301 L 1 HETATM 9 C C9 2PE . . . F 6 -14.498 20.54 66.355 1 113.41 ? C9 2PE 301 L 1 HETATM 10 O O10 2PE . . . F 6 -14.826 20.034 67.621 1 113.53 ? O10 2PE 301 L 1 HETATM 11 C C11 2PE . . . F 6 -13.764 19.422 68.301 1 113 ? C11 2PE 301 L 1 HETATM 12 C C12 2PE . . . F 6 -14.298 18.664 69.516 1 111.62 ? C12 2PE 301 L 1 HETATM 13 O O13 2PE . . . F 6 -14.691 17.375 69.131 1 112.83 ? O13 2PE 301 L 1 HETATM 14 C C14 2PE . . . F 6 -13.701 16.388 69.235 1 108.61 ? C14 2PE 301 L 1 HETATM 15 C C15 2PE . . . F 6 -14.336 15.005 69.079 1 107.36 ? C15 2PE 301 L 1 HETATM 16 O O16 2PE . . . F 6 -15.032 14.923 67.865 1 108.92 ? O16 2PE 301 L 1 HETATM 17 C C17 2PE . . . F 6 -15.244 13.615 67.408 1 107.61 ? C17 2PE 301 L 1 HETATM 18 C C18 2PE . . . F 6 -16.384 13.595 66.388 1 107.34 ? C18 2PE 301 L 1 HETATM 19 O O19 2PE . . . F 6 -17.228 12.501 66.624 1 110.81 ? O19 2PE 301 L 1 HETATM 20 C C20 2PE . . . F 6 -18.118 12.642 67.697 1 105.44 ? C20 2PE 301 L 1 HETATM 21 C C21 2PE . . . F 6 -18.694 11.273 68.055 1 102 ? C21 2PE 301 L 1 HETATM 22 O O22 2PE . . . F 6 -19.19 11.295 69.366 1 99.58 ? O22 2PE 301 L 1 HETATM 23 C C23 2PE . . . F 6 -20.56 11.573 69.452 1 94.93 ? C23 2PE 301 L 1 HETATM 24 C C24 2PE . . . F 6 -21.074 11.354 70.878 1 91.34 ? C24 2PE 301 L 1 HETATM 25 O O25 2PE . . . F 6 -20.399 12.141 71.827 1 89.83 ? O25 2PE 301 L 1 HETATM 26 C C26 2PE . . . F 6 -20.518 13.537 71.738 1 89 ? C26 2PE 301 L 1 HETATM 27 C C27 2PE . . . F 6 -21.79 14.066 72.404 1 87.56 ? C27 2PE 301 L 1 HETATM 28 O O28 2PE . . . F 6 -22.843 13.152 72.289 1 89.63 ? O28 2PE 301 L 1 HETATM 29 H HO1 2PE . . . F 6 -18.814 14.641 62.821 1 143.1 ? HO1 2PE 301 L 1 HETATM 30 H H21 2PE . . . F 6 -17.585 15.665 64.082 1 138.07 ? H21 2PE 301 L 1 HETATM 31 H H22 2PE . . . F 6 -16.351 14.81 63.576 1 138.07 ? H22 2PE 301 L 1 HETATM 32 H H31 2PE . . . F 6 -16.329 16.095 61.57 1 137.73 ? H31 2PE 301 L 1 HETATM 33 H H32 2PE . . . F 6 -17.495 16.992 62.16 1 137.73 ? H32 2PE 301 L 1 HETATM 34 H H51 2PE . . . F 6 -15.126 18.132 61.435 1 133.96 ? H51 2PE 301 L 1 HETATM 35 H H52 2PE . . . F 6 -16.087 19.028 62.32 1 133.96 ? H52 2PE 301 L 1 HETATM 36 H H61 2PE . . . F 6 -13.612 18.291 63.43 1 135.48 ? H61 2PE 301 L 1 HETATM 37 H H62 2PE . . . F 6 -13.619 19.483 62.387 1 135.48 ? H62 2PE 301 L 1 HETATM 38 H H81 2PE . . . F 6 -13.568 18.943 65.436 1 134.81 ? H81 2PE 301 L 1 HETATM 39 H H82 2PE . . . F 6 -15.138 18.756 65.537 1 134.81 ? H82 2PE 301 L 1 HETATM 40 H H91 2PE . . . F 6 -15.178 21.172 66.074 1 136.19 ? H91 2PE 301 L 1 HETATM 41 H H92 2PE . . . F 6 -13.639 20.987 66.397 1 136.19 ? H92 2PE 301 L 1 HETATM 42 H H111 2PE . . . F 6 -13.316 18.801 67.706 1 135.7 ? H111 2PE 301 L 1 HETATM 43 H H112 2PE . . . F 6 -13.136 20.1 68.594 1 135.7 ? H112 2PE 301 L 1 HETATM 44 H H121 2PE . . . F 6 -13.602 18.602 70.189 1 134.04 ? H121 2PE 301 L 1 HETATM 45 H H122 2PE . . . F 6 -15.06 19.138 69.883 1 134.04 ? H122 2PE 301 L 1 HETATM 46 H H141 2PE . . . F 6 -13.272 16.451 70.103 1 130.44 ? H141 2PE 301 L 1 HETATM 47 H H142 2PE . . . F 6 -13.04 16.52 68.538 1 130.44 ? H142 2PE 301 L 1 HETATM 48 H H151 2PE . . . F 6 -13.64 14.329 69.095 1 128.93 ? H151 2PE 301 L 1 HETATM 49 H H152 2PE . . . F 6 -14.952 14.852 69.812 1 128.93 ? H152 2PE 301 L 1 HETATM 50 H H171 2PE . . . F 6 -15.475 13.045 68.159 1 129.23 ? H171 2PE 301 L 1 HETATM 51 H H172 2PE . . . F 6 -14.433 13.285 66.991 1 129.23 ? H172 2PE 301 L 1 HETATM 52 H H181 2PE . . . F 6 -16.013 13.527 65.494 1 128.91 ? H181 2PE 301 L 1 HETATM 53 H H182 2PE . . . F 6 -16.895 14.416 66.463 1 128.91 ? H182 2PE 301 L 1 HETATM 54 H H201 2PE . . . F 6 -17.648 13.007 68.463 1 126.63 ? H201 2PE 301 L 1 HETATM 55 H H202 2PE . . . F 6 -18.839 13.241 67.444 1 126.63 ? H202 2PE 301 L 1 HETATM 56 H H211 2PE . . . F 6 -19.413 11.055 67.442 1 122.5 ? H211 2PE 301 L 1 HETATM 57 H H212 2PE . . . F 6 -17.996 10.602 67.986 1 122.5 ? H212 2PE 301 L 1 HETATM 58 H H231 2PE . . . F 6 -21.041 10.988 68.847 1 114.02 ? H231 2PE 301 L 1 HETATM 59 H H232 2PE . . . F 6 -20.712 12.497 69.198 1 114.02 ? H232 2PE 301 L 1 HETATM 60 H H241 2PE . . . F 6 -20.956 10.419 71.109 1 109.71 ? H241 2PE 301 L 1 HETATM 61 H H242 2PE . . . F 6 -22.018 11.577 70.905 1 109.71 ? H242 2PE 301 L 1 HETATM 62 H H261 2PE . . . F 6 -19.75 13.942 72.17 1 106.9 ? H261 2PE 301 L 1 HETATM 63 H H262 2PE . . . F 6 -20.531 13.788 70.801 1 106.9 ? H262 2PE 301 L 1 HETATM 64 H H271 2PE . . . F 6 -22.047 14.899 71.978 1 105.18 ? H271 2PE 301 L 1 HETATM 65 H H272 2PE . . . F 6 -21.612 14.226 73.344 1 105.18 ? H272 2PE 301 L 1 HETATM 66 H HO2 2PE . . . F 6 -23.581 13.551 72.424 1 107.66 ? HO2 2PE 301 L 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 66 #