data_6Q0L
#
_model_server_result.job_id            rcnadGVPFthnkRD1Mjo1vg 
_model_server_result.datetime_utc      '2024-12-01 01:14:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6q0l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":304}' 
#
_entry.id    6Q0L 
#
_exptl.entry_id    6Q0L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6Q0L 
_cell.length_a            57.59 
_cell.length_b            70.28 
_cell.length_c            191.34 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6Q0L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 8 A CYS 59 1_555 A SG CYS 20 A CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 A SG CYS 43 A CYS 94 1_555 A SG CYS 88 A CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf4 B SG CYS 103 H CYS 103 1_555 B SG CYS 108 H CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf5 B SG CYS 157 H CYS 157 1_555 B SG CYS 213 H CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf6 B SG CYS 233 H CYS 233 1_555 C SG CYS 216 L CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf7 C SG CYS 24 L CYS 22 1_555 C SG CYS 89 L CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf8 C SG CYS 139 L CYS 137 1_555 C SG CYS 198 L CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
covale ? covale1 A ND2 ASN 7 A ASN 58 1_555 D C1 NAG . A NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
covale ? covale2 A ND2 ASN 112 A ASN 163 1_555 E C1 NAG . A NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6Q0L 
_atom_sites.fract_transf_matrix[1][1]    0.017364 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014229 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005226 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NAG A 1 301 264 NAG NAG . 
E 4 NAG A 1 302 265 NAG NAG . 
F 5 GOL H 1 401 401 GOL GOL . 
G 5 GOL H 1 402 501 GOL GOL . 
H 5 GOL L 1 301 301 GOL GOL . 
I 5 GOL L 1 302 401 GOL GOL . 
J 5 GOL L 1 303 501 GOL GOL . 
K 5 GOL L 1 304 601 GOL GOL . 
L 5 GOL L 1 305 701 GOL GOL . 
M 6 HOH A 1 401 40 HOH HOH . 
M 6 HOH A 2 402 8 HOH HOH . 
M 6 HOH A 3 403 16 HOH HOH . 
M 6 HOH A 4 404 33 HOH HOH . 
M 6 HOH A 5 405 12 HOH HOH . 
M 6 HOH A 6 406 41 HOH HOH . 
M 6 HOH A 7 407 30 HOH HOH . 
N 6 HOH H 1 501 14 HOH HOH . 
N 6 HOH H 2 502 45 HOH HOH . 
N 6 HOH H 3 503 47 HOH HOH . 
N 6 HOH H 4 504 27 HOH HOH . 
N 6 HOH H 5 505 7 HOH HOH . 
N 6 HOH H 6 506 24 HOH HOH . 
N 6 HOH H 7 507 19 HOH HOH . 
N 6 HOH H 8 508 5 HOH HOH . 
N 6 HOH H 9 509 21 HOH HOH . 
N 6 HOH H 10 510 1 HOH HOH . 
N 6 HOH H 11 511 15 HOH HOH . 
N 6 HOH H 12 512 49 HOH HOH . 
N 6 HOH H 13 513 25 HOH HOH . 
N 6 HOH H 14 514 13 HOH HOH . 
N 6 HOH H 15 515 35 HOH HOH . 
N 6 HOH H 16 516 28 HOH HOH . 
N 6 HOH H 17 517 48 HOH HOH . 
N 6 HOH H 18 518 46 HOH HOH . 
N 6 HOH H 19 519 34 HOH HOH . 
N 6 HOH H 20 520 32 HOH HOH . 
N 6 HOH H 21 521 38 HOH HOH . 
N 6 HOH H 22 522 26 HOH HOH . 
N 6 HOH H 23 523 37 HOH HOH . 
O 6 HOH L 1 401 39 HOH HOH . 
O 6 HOH L 2 402 2 HOH HOH . 
O 6 HOH L 3 403 4 HOH HOH . 
O 6 HOH L 4 404 22 HOH HOH . 
O 6 HOH L 5 405 17 HOH HOH . 
O 6 HOH L 6 406 31 HOH HOH . 
O 6 HOH L 7 407 44 HOH HOH . 
O 6 HOH L 8 408 3 HOH HOH . 
O 6 HOH L 9 409 20 HOH HOH . 
O 6 HOH L 10 410 6 HOH HOH . 
O 6 HOH L 11 411 29 HOH HOH . 
O 6 HOH L 12 412 18 HOH HOH . 
O 6 HOH L 13 413 11 HOH HOH . 
O 6 HOH L 14 414 23 HOH HOH . 
O 6 HOH L 15 415 10 HOH HOH . 
O 6 HOH L 16 416 9 HOH HOH . 
O 6 HOH L 17 417 42 HOH HOH . 
O 6 HOH L 18 418 43 HOH HOH . 
O 6 HOH L 19 419 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . K 5 -8.078 33.459 54.25 1 80.88 ? C1 GOL 304 L 1 
HETATM 2 O O1 GOL . . . K 5 -7.91 32.558 55.297 1 79.5 ? O1 GOL 304 L 1 
HETATM 3 C C2 GOL . . . K 5 -8.645 32.656 53.053 1 82.11 ? C2 GOL 304 L 1 
HETATM 4 O O2 GOL . . . K 5 -8.592 33.38 51.867 1 82.62 ? O2 GOL 304 L 1 
HETATM 5 C C3 GOL . . . K 5 -7.786 31.375 52.997 1 80.31 ? C3 GOL 304 L 1 
HETATM 6 O O3 GOL . . . K 5 -8.3 30.586 51.977 1 80.62 ? O3 GOL 304 L 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           245 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#