data_6Q11
#
_model_server_result.job_id            0t18OTNQhQSERABEOn-s7g 
_model_server_result.datetime_utc      '2024-11-05 04:53:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6q11 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    6Q11 
#
_exptl.entry_id    6Q11 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6Q11 
_cell.length_a            137.951 
_cell.length_b            137.951 
_cell.length_c            137.951 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6Q11 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        197 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -137.951 0 
3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
4 'crystal symmetry operation' 4_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -137.951 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASP 351 A ASP 347 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? 
metalc ? metalc2 A O ASP 351 A ASP 347 1_555 E NA NA . A NA 504 2_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? 
metalc ? metalc3 A OG SER 354 A SER 350 1_555 E NA NA . A NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? 
metalc ? metalc4 A OG SER 354 A SER 350 1_555 E NA NA . A NA 504 2_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? 
metalc ? metalc5 E NA NA . A NA 504 1_555 F O HOH . A HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc6 E NA NA . A NA 504 1_555 F O HOH . A HOH 625 2_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6Q11 
_atom_sites.fract_transf_matrix[1][1]    0.007249 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007249 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007249 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EPU A 1 501 1 EPU EPU . 
C 3 EDO A 1 502 1 EDO EDO . 
D 3 EDO A 1 503 2 EDO EDO . 
E 4 NA A 1 504 1 NA NA . 
F 5 HOH A 1 601 713 HOH HOH . 
F 5 HOH A 2 602 714 HOH HOH . 
F 5 HOH A 3 603 569 HOH HOH . 
F 5 HOH A 4 604 218 HOH HOH . 
F 5 HOH A 5 605 700 HOH HOH . 
F 5 HOH A 6 606 57 HOH HOH . 
F 5 HOH A 7 607 575 HOH HOH . 
F 5 HOH A 8 608 107 HOH HOH . 
F 5 HOH A 9 609 164 HOH HOH . 
F 5 HOH A 10 610 32 HOH HOH . 
F 5 HOH A 11 611 47 HOH HOH . 
F 5 HOH A 12 612 691 HOH HOH . 
F 5 HOH A 13 613 634 HOH HOH . 
F 5 HOH A 14 614 39 HOH HOH . 
F 5 HOH A 15 615 196 HOH HOH . 
F 5 HOH A 16 616 675 HOH HOH . 
F 5 HOH A 17 617 676 HOH HOH . 
F 5 HOH A 18 618 669 HOH HOH . 
F 5 HOH A 19 619 316 HOH HOH . 
F 5 HOH A 20 620 209 HOH HOH . 
F 5 HOH A 21 621 202 HOH HOH . 
F 5 HOH A 22 622 183 HOH HOH . 
F 5 HOH A 23 623 140 HOH HOH . 
F 5 HOH A 24 624 44 HOH HOH . 
F 5 HOH A 25 625 702 HOH HOH . 
F 5 HOH A 26 626 70 HOH HOH . 
F 5 HOH A 27 627 74 HOH HOH . 
F 5 HOH A 28 628 705 HOH HOH . 
F 5 HOH A 29 629 68 HOH HOH . 
F 5 HOH A 30 630 262 HOH HOH . 
F 5 HOH A 31 631 212 HOH HOH . 
F 5 HOH A 32 632 117 HOH HOH . 
F 5 HOH A 33 633 704 HOH HOH . 
F 5 HOH A 34 634 84 HOH HOH . 
F 5 HOH A 35 635 58 HOH HOH . 
F 5 HOH A 36 636 631 HOH HOH . 
F 5 HOH A 37 637 598 HOH HOH . 
F 5 HOH A 38 638 116 HOH HOH . 
F 5 HOH A 39 639 65 HOH HOH . 
F 5 HOH A 40 640 253 HOH HOH . 
F 5 HOH A 41 641 2 HOH HOH . 
F 5 HOH A 42 642 24 HOH HOH . 
F 5 HOH A 43 643 708 HOH HOH . 
F 5 HOH A 44 644 52 HOH HOH . 
F 5 HOH A 45 645 108 HOH HOH . 
F 5 HOH A 46 646 18 HOH HOH . 
F 5 HOH A 47 647 672 HOH HOH . 
F 5 HOH A 48 648 260 HOH HOH . 
F 5 HOH A 49 649 324 HOH HOH . 
F 5 HOH A 50 650 6 HOH HOH . 
F 5 HOH A 51 651 25 HOH HOH . 
F 5 HOH A 52 652 136 HOH HOH . 
F 5 HOH A 53 653 10 HOH HOH . 
F 5 HOH A 54 654 20 HOH HOH . 
F 5 HOH A 55 655 50 HOH HOH . 
F 5 HOH A 56 656 130 HOH HOH . 
F 5 HOH A 57 657 167 HOH HOH . 
F 5 HOH A 58 658 63 HOH HOH . 
F 5 HOH A 59 659 595 HOH HOH . 
F 5 HOH A 60 660 106 HOH HOH . 
F 5 HOH A 61 661 623 HOH HOH . 
F 5 HOH A 62 662 258 HOH HOH . 
F 5 HOH A 63 663 233 HOH HOH . 
F 5 HOH A 64 664 16 HOH HOH . 
F 5 HOH A 65 665 48 HOH HOH . 
F 5 HOH A 66 666 28 HOH HOH . 
F 5 HOH A 67 667 33 HOH HOH . 
F 5 HOH A 68 668 243 HOH HOH . 
F 5 HOH A 69 669 31 HOH HOH . 
F 5 HOH A 70 670 11 HOH HOH . 
F 5 HOH A 71 671 38 HOH HOH . 
F 5 HOH A 72 672 221 HOH HOH . 
F 5 HOH A 73 673 17 HOH HOH . 
F 5 HOH A 74 674 712 HOH HOH . 
F 5 HOH A 75 675 194 HOH HOH . 
F 5 HOH A 76 676 670 HOH HOH . 
F 5 HOH A 77 677 56 HOH HOH . 
F 5 HOH A 78 678 81 HOH HOH . 
F 5 HOH A 79 679 246 HOH HOH . 
F 5 HOH A 80 680 9 HOH HOH . 
F 5 HOH A 81 681 693 HOH HOH . 
F 5 HOH A 82 682 132 HOH HOH . 
F 5 HOH A 83 683 236 HOH HOH . 
F 5 HOH A 84 684 195 HOH HOH . 
F 5 HOH A 85 685 630 HOH HOH . 
F 5 HOH A 86 686 4 HOH HOH . 
F 5 HOH A 87 687 594 HOH HOH . 
F 5 HOH A 88 688 687 HOH HOH . 
F 5 HOH A 89 689 72 HOH HOH . 
F 5 HOH A 90 690 12 HOH HOH . 
F 5 HOH A 91 691 54 HOH HOH . 
F 5 HOH A 92 692 22 HOH HOH . 
F 5 HOH A 93 693 46 HOH HOH . 
F 5 HOH A 94 694 711 HOH HOH . 
F 5 HOH A 95 695 36 HOH HOH . 
F 5 HOH A 96 696 671 HOH HOH . 
F 5 HOH A 97 697 8 HOH HOH . 
F 5 HOH A 98 698 75 HOH HOH . 
F 5 HOH A 99 699 240 HOH HOH . 
F 5 HOH A 100 700 659 HOH HOH . 
F 5 HOH A 101 701 684 HOH HOH . 
F 5 HOH A 102 702 696 HOH HOH . 
F 5 HOH A 103 703 160 HOH HOH . 
F 5 HOH A 104 704 660 HOH HOH . 
F 5 HOH A 105 705 109 HOH HOH . 
F 5 HOH A 106 706 23 HOH HOH . 
F 5 HOH A 107 707 21 HOH HOH . 
F 5 HOH A 108 708 141 HOH HOH . 
F 5 HOH A 109 709 98 HOH HOH . 
F 5 HOH A 110 710 353 HOH HOH . 
F 5 HOH A 111 711 83 HOH HOH . 
F 5 HOH A 112 712 154 HOH HOH . 
F 5 HOH A 113 713 188 HOH HOH . 
F 5 HOH A 114 714 89 HOH HOH . 
F 5 HOH A 115 715 101 HOH HOH . 
F 5 HOH A 116 716 29 HOH HOH . 
F 5 HOH A 117 717 69 HOH HOH . 
F 5 HOH A 118 718 216 HOH HOH . 
F 5 HOH A 119 719 190 HOH HOH . 
F 5 HOH A 120 720 178 HOH HOH . 
F 5 HOH A 121 721 3 HOH HOH . 
F 5 HOH A 122 722 269 HOH HOH . 
F 5 HOH A 123 723 115 HOH HOH . 
F 5 HOH A 124 724 682 HOH HOH . 
F 5 HOH A 125 725 93 HOH HOH . 
F 5 HOH A 126 726 156 HOH HOH . 
F 5 HOH A 127 727 680 HOH HOH . 
F 5 HOH A 128 728 494 HOH HOH . 
F 5 HOH A 129 729 658 HOH HOH . 
F 5 HOH A 130 730 683 HOH HOH . 
F 5 HOH A 131 731 688 HOH HOH . 
F 5 HOH A 132 732 599 HOH HOH . 
F 5 HOH A 133 733 551 HOH HOH . 
F 5 HOH A 134 734 225 HOH HOH . 
F 5 HOH A 135 735 242 HOH HOH . 
F 5 HOH A 136 736 87 HOH HOH . 
F 5 HOH A 137 737 34 HOH HOH . 
F 5 HOH A 138 738 73 HOH HOH . 
F 5 HOH A 139 739 662 HOH HOH . 
F 5 HOH A 140 740 1 HOH HOH . 
F 5 HOH A 141 741 155 HOH HOH . 
F 5 HOH A 142 742 665 HOH HOH . 
F 5 HOH A 143 743 76 HOH HOH . 
F 5 HOH A 144 744 285 HOH HOH . 
F 5 HOH A 145 745 59 HOH HOH . 
F 5 HOH A 146 746 85 HOH HOH . 
F 5 HOH A 147 747 170 HOH HOH . 
F 5 HOH A 148 748 111 HOH HOH . 
F 5 HOH A 149 749 561 HOH HOH . 
F 5 HOH A 150 750 166 HOH HOH . 
F 5 HOH A 151 751 566 HOH HOH . 
F 5 HOH A 152 752 139 HOH HOH . 
F 5 HOH A 153 753 62 HOH HOH . 
F 5 HOH A 154 754 176 HOH HOH . 
F 5 HOH A 155 755 677 HOH HOH . 
F 5 HOH A 156 756 192 HOH HOH . 
F 5 HOH A 157 757 184 HOH HOH . 
F 5 HOH A 158 758 42 HOH HOH . 
F 5 HOH A 159 759 181 HOH HOH . 
F 5 HOH A 160 760 172 HOH HOH . 
F 5 HOH A 161 761 142 HOH HOH . 
F 5 HOH A 162 762 92 HOH HOH . 
F 5 HOH A 163 763 55 HOH HOH . 
F 5 HOH A 164 764 64 HOH HOH . 
F 5 HOH A 165 765 102 HOH HOH . 
F 5 HOH A 166 766 121 HOH HOH . 
F 5 HOH A 167 767 548 HOH HOH . 
F 5 HOH A 168 768 5 HOH HOH . 
F 5 HOH A 169 769 555 HOH HOH . 
F 5 HOH A 170 770 224 HOH HOH . 
F 5 HOH A 171 771 95 HOH HOH . 
F 5 HOH A 172 772 163 HOH HOH . 
F 5 HOH A 173 773 7 HOH HOH . 
F 5 HOH A 174 774 582 HOH HOH . 
F 5 HOH A 175 775 80 HOH HOH . 
F 5 HOH A 176 776 674 HOH HOH . 
F 5 HOH A 177 777 151 HOH HOH . 
F 5 HOH A 178 778 41 HOH HOH . 
F 5 HOH A 179 779 30 HOH HOH . 
F 5 HOH A 180 780 690 HOH HOH . 
F 5 HOH A 181 781 171 HOH HOH . 
F 5 HOH A 182 782 685 HOH HOH . 
F 5 HOH A 183 783 35 HOH HOH . 
F 5 HOH A 184 784 710 HOH HOH . 
F 5 HOH A 185 785 686 HOH HOH . 
F 5 HOH A 186 786 129 HOH HOH . 
F 5 HOH A 187 787 694 HOH HOH . 
F 5 HOH A 188 788 120 HOH HOH . 
F 5 HOH A 189 789 97 HOH HOH . 
F 5 HOH A 190 790 697 HOH HOH . 
F 5 HOH A 191 791 272 HOH HOH . 
F 5 HOH A 192 792 291 HOH HOH . 
F 5 HOH A 193 793 605 HOH HOH . 
F 5 HOH A 194 794 698 HOH HOH . 
F 5 HOH A 195 795 701 HOH HOH . 
F 5 HOH A 196 796 560 HOH HOH . 
F 5 HOH A 197 797 636 HOH HOH . 
F 5 HOH A 198 798 663 HOH HOH . 
F 5 HOH A 199 799 149 HOH HOH . 
F 5 HOH A 200 800 504 HOH HOH . 
F 5 HOH A 201 801 678 HOH HOH . 
F 5 HOH A 202 802 210 HOH HOH . 
F 5 HOH A 203 803 244 HOH HOH . 
F 5 HOH A 204 804 325 HOH HOH . 
F 5 HOH A 205 805 602 HOH HOH . 
F 5 HOH A 206 806 706 HOH HOH . 
F 5 HOH A 207 807 148 HOH HOH . 
F 5 HOH A 208 808 666 HOH HOH . 
F 5 HOH A 209 809 597 HOH HOH . 
F 5 HOH A 210 810 661 HOH HOH . 
F 5 HOH A 211 811 396 HOH HOH . 
F 5 HOH A 212 812 629 HOH HOH . 
F 5 HOH A 213 813 673 HOH HOH . 
F 5 HOH A 214 814 419 HOH HOH . 
F 5 HOH A 215 815 201 HOH HOH . 
F 5 HOH A 216 816 633 HOH HOH . 
F 5 HOH A 217 817 664 HOH HOH . 
F 5 HOH A 218 818 261 HOH HOH . 
F 5 HOH A 219 819 147 HOH HOH . 
F 5 HOH A 220 820 681 HOH HOH . 
F 5 HOH A 221 821 144 HOH HOH . 
F 5 HOH A 222 822 277 HOH HOH . 
F 5 HOH A 223 823 699 HOH HOH . 
F 5 HOH A 224 824 689 HOH HOH . 
F 5 HOH A 225 825 679 HOH HOH . 
F 5 HOH A 226 826 546 HOH HOH . 
F 5 HOH A 227 827 695 HOH HOH . 
F 5 HOH A 228 828 707 HOH HOH . 
F 5 HOH A 229 829 45 HOH HOH . 
F 5 HOH A 230 830 547 HOH HOH . 
F 5 HOH A 231 831 654 HOH HOH . 
F 5 HOH A 232 832 703 HOH HOH . 
F 5 HOH A 233 833 522 HOH HOH . 
F 5 HOH A 234 834 571 HOH HOH . 
F 5 HOH A 235 835 709 HOH HOH . 
F 5 HOH A 236 836 579 HOH HOH . 
F 5 HOH A 237 837 627 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 3 0.644 -46.561 0.774 0.5 45.28 ? C1 EDO 503 A 1 
HETATM 2 O O1 EDO . . . D 3 -0.751 -46.28 1.038 0.5 48.93 ? O1 EDO 503 A 1 
HETATM 3 C C2 EDO . . . D 3 0.887 -46.663 -0.739 0.5 45.35 ? C2 EDO 503 A 1 
HETATM 4 O O2 EDO . . . D 3 2.097 -47.381 -1.051 0.5 37.91 ? O2 EDO 503 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#