data_6Q1M # _model_server_result.job_id chs60wnIrCvsQt5uR1f02w _model_server_result.datetime_utc '2024-11-22 18:10:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6q1m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 6Q1M # _exptl.entry_id 6Q1M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Q1M _cell.length_a 49.566 _cell.length_b 49.566 _cell.length_c 145.653 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q1M _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6Q1M _atom_sites.fract_transf_matrix[1][1] 0.020175 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020175 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006866 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 201 GOL GOL . C 2 GOL A 1 202 202 GOL GOL . D 2 GOL A 1 203 203 GOL GOL . E 2 GOL A 1 204 204 GOL GOL . F 3 HOH A 1 301 320 HOH HOH . F 3 HOH A 2 302 301 HOH HOH . F 3 HOH A 3 303 303 HOH HOH . F 3 HOH A 4 304 304 HOH HOH . F 3 HOH A 5 305 302 HOH HOH . F 3 HOH A 6 306 306 HOH HOH . F 3 HOH A 7 307 305 HOH HOH . F 3 HOH A 8 308 307 HOH HOH . F 3 HOH A 9 309 308 HOH HOH . F 3 HOH A 10 310 315 HOH HOH . F 3 HOH A 11 311 310 HOH HOH . F 3 HOH A 12 312 309 HOH HOH . F 3 HOH A 13 313 311 HOH HOH . F 3 HOH A 14 314 314 HOH HOH . F 3 HOH A 15 315 321 HOH HOH . F 3 HOH A 16 316 313 HOH HOH . F 3 HOH A 17 317 319 HOH HOH . F 3 HOH A 18 318 317 HOH HOH . F 3 HOH A 19 319 324 HOH HOH . F 3 HOH A 20 320 318 HOH HOH . F 3 HOH A 21 321 323 HOH HOH . F 3 HOH A 22 322 325 HOH HOH . F 3 HOH A 23 323 331 HOH HOH . F 3 HOH A 24 324 334 HOH HOH . F 3 HOH A 25 325 312 HOH HOH . F 3 HOH A 26 326 328 HOH HOH . F 3 HOH A 27 327 332 HOH HOH . F 3 HOH A 28 328 326 HOH HOH . F 3 HOH A 29 329 335 HOH HOH . F 3 HOH A 30 330 330 HOH HOH . F 3 HOH A 31 331 339 HOH HOH . F 3 HOH A 32 332 322 HOH HOH . F 3 HOH A 33 333 327 HOH HOH . F 3 HOH A 34 334 316 HOH HOH . F 3 HOH A 35 335 329 HOH HOH . F 3 HOH A 36 336 343 HOH HOH . F 3 HOH A 37 337 341 HOH HOH . F 3 HOH A 38 338 337 HOH HOH . F 3 HOH A 39 339 340 HOH HOH . F 3 HOH A 40 340 338 HOH HOH . F 3 HOH A 41 341 345 HOH HOH . F 3 HOH A 42 342 344 HOH HOH . F 3 HOH A 43 343 336 HOH HOH . F 3 HOH A 44 344 347 HOH HOH . F 3 HOH A 45 345 346 HOH HOH . F 3 HOH A 46 346 333 HOH HOH . F 3 HOH A 47 347 351 HOH HOH . F 3 HOH A 48 348 349 HOH HOH . F 3 HOH A 49 349 348 HOH HOH . F 3 HOH A 50 350 350 HOH HOH . F 3 HOH A 51 351 355 HOH HOH . F 3 HOH A 52 352 352 HOH HOH . F 3 HOH A 53 353 342 HOH HOH . F 3 HOH A 54 354 358 HOH HOH . F 3 HOH A 55 355 357 HOH HOH . F 3 HOH A 56 356 360 HOH HOH . F 3 HOH A 57 357 361 HOH HOH . F 3 HOH A 58 358 353 HOH HOH . F 3 HOH A 59 359 359 HOH HOH . F 3 HOH A 60 360 356 HOH HOH . F 3 HOH A 61 361 354 HOH HOH . F 3 HOH A 62 362 364 HOH HOH . F 3 HOH A 63 363 370 HOH HOH . F 3 HOH A 64 364 368 HOH HOH . F 3 HOH A 65 365 375 HOH HOH . F 3 HOH A 66 366 365 HOH HOH . F 3 HOH A 67 367 362 HOH HOH . F 3 HOH A 68 368 374 HOH HOH . F 3 HOH A 69 369 369 HOH HOH . F 3 HOH A 70 370 373 HOH HOH . F 3 HOH A 71 371 367 HOH HOH . F 3 HOH A 72 372 366 HOH HOH . F 3 HOH A 73 373 376 HOH HOH . F 3 HOH A 74 374 372 HOH HOH . F 3 HOH A 75 375 379 HOH HOH . F 3 HOH A 76 376 378 HOH HOH . F 3 HOH A 77 377 383 HOH HOH . F 3 HOH A 78 378 371 HOH HOH . F 3 HOH A 79 379 384 HOH HOH . F 3 HOH A 80 380 380 HOH HOH . F 3 HOH A 81 381 377 HOH HOH . F 3 HOH A 82 382 382 HOH HOH . F 3 HOH A 83 383 363 HOH HOH . F 3 HOH A 84 384 381 HOH HOH . F 3 HOH A 85 385 385 HOH HOH . F 3 HOH A 86 386 392 HOH HOH . F 3 HOH A 87 387 386 HOH HOH . F 3 HOH A 88 388 389 HOH HOH . F 3 HOH A 89 389 387 HOH HOH . F 3 HOH A 90 390 388 HOH HOH . F 3 HOH A 91 391 391 HOH HOH . F 3 HOH A 92 392 390 HOH HOH . F 3 HOH A 93 393 394 HOH HOH . F 3 HOH A 94 394 393 HOH HOH . F 3 HOH A 95 395 395 HOH HOH . F 3 HOH A 96 396 396 HOH HOH . F 3 HOH A 97 397 398 HOH HOH . F 3 HOH A 98 398 397 HOH HOH . F 3 HOH A 99 399 400 HOH HOH . F 3 HOH A 100 400 399 HOH HOH . F 3 HOH A 101 401 401 HOH HOH . F 3 HOH A 102 402 402 HOH HOH . F 3 HOH A 103 403 403 HOH HOH . F 3 HOH A 104 404 405 HOH HOH . F 3 HOH A 105 405 404 HOH HOH . F 3 HOH A 106 406 406 HOH HOH . F 3 HOH A 107 407 407 HOH HOH . F 3 HOH A 108 408 408 HOH HOH . F 3 HOH A 109 409 409 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 -26.874 -2.893 13.104 0.89 33.96 ? C1 GOL 203 A 1 HETATM 2 O O1 GOL . . . D 2 -27.404 -1.815 13.811 0.89 33.29 ? O1 GOL 203 A 1 HETATM 3 C C2 GOL . . . D 2 -26.457 -3.95 14.137 0.89 30.7 ? C2 GOL 203 A 1 HETATM 4 O O2 GOL . . . D 2 -26.12 -5.145 13.559 0.89 29.06 ? O2 GOL 203 A 1 HETATM 5 C C3 GOL . . . D 2 -25.276 -3.344 14.909 0.89 27.91 ? C3 GOL 203 A 1 HETATM 6 O O3 GOL . . . D 2 -25.419 -3.832 16.196 0.89 25.95 ? O3 GOL 203 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #