data_6Q22 # _model_server_result.job_id 5qoKQgcYFllC2jSdkpFOIw _model_server_result.datetime_utc '2025-08-03 22:37:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6q22 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 6Q22 # _exptl.entry_id 6Q22 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6Q22 _cell.length_a 39.364 _cell.length_b 39.364 _cell.length_c 98.12 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q22 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1,2,4 B,E,G 2 1,3,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 19.682 -34.090224 0 3 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 39.364 0 0 5 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N GLU 2 A GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C GLU 14 A GLU 13 1_555 A N ABA 15 A ABA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C ABA 15 A ABA 14 1_555 A N LYS 16 A LYS 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 B C ACE 1 B ACE 0 1_555 B N GLU 2 B GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 B C GLU 14 B GLU 13 1_555 B N ABA 15 B ABA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 B C ABA 15 B ABA 14 1_555 B N LYS 16 B LYS 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 6Q22 _atom_sites.fract_transf_matrix[1][1] 0.025404 _atom_sites.fract_transf_matrix[1][2] 0.014667 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029334 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010192 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1PE A 1 101 1 1PE 1PE . D 2 1PE A 1 102 3 1PE 1PE . E 2 1PE B 1 101 2 1PE 1PE . F 3 HOH A 1 201 20 HOH HOH . F 3 HOH A 2 202 51 HOH HOH . F 3 HOH A 3 203 34 HOH HOH . F 3 HOH A 4 204 13 HOH HOH . F 3 HOH A 5 205 6 HOH HOH . F 3 HOH A 6 206 21 HOH HOH . F 3 HOH A 7 207 47 HOH HOH . F 3 HOH A 8 208 1 HOH HOH . F 3 HOH A 9 209 33 HOH HOH . F 3 HOH A 10 210 5 HOH HOH . F 3 HOH A 11 211 19 HOH HOH . F 3 HOH A 12 212 17 HOH HOH . F 3 HOH A 13 213 37 HOH HOH . F 3 HOH A 14 214 11 HOH HOH . F 3 HOH A 15 215 40 HOH HOH . F 3 HOH A 16 216 4 HOH HOH . F 3 HOH A 17 217 9 HOH HOH . F 3 HOH A 18 218 48 HOH HOH . F 3 HOH A 19 219 28 HOH HOH . F 3 HOH A 20 220 18 HOH HOH . F 3 HOH A 21 221 42 HOH HOH . F 3 HOH A 22 222 53 HOH HOH . F 3 HOH A 23 223 46 HOH HOH . F 3 HOH A 24 224 31 HOH HOH . F 3 HOH A 25 225 36 HOH HOH . F 3 HOH A 26 226 22 HOH HOH . F 3 HOH A 27 227 52 HOH HOH . F 3 HOH A 28 228 44 HOH HOH . F 3 HOH A 29 229 43 HOH HOH . F 3 HOH A 30 230 41 HOH HOH . G 3 HOH B 1 201 29 HOH HOH . G 3 HOH B 2 202 23 HOH HOH . G 3 HOH B 3 203 7 HOH HOH . G 3 HOH B 4 204 32 HOH HOH . G 3 HOH B 5 205 38 HOH HOH . G 3 HOH B 6 206 15 HOH HOH . G 3 HOH B 7 207 8 HOH HOH . G 3 HOH B 8 208 12 HOH HOH . G 3 HOH B 9 209 30 HOH HOH . G 3 HOH B 10 210 2 HOH HOH . G 3 HOH B 11 211 3 HOH HOH . G 3 HOH B 12 212 10 HOH HOH . G 3 HOH B 13 213 27 HOH HOH . G 3 HOH B 14 214 16 HOH HOH . G 3 HOH B 15 215 35 HOH HOH . G 3 HOH B 16 216 24 HOH HOH . G 3 HOH B 17 217 14 HOH HOH . G 3 HOH B 18 218 50 HOH HOH . G 3 HOH B 19 219 26 HOH HOH . G 3 HOH B 20 220 25 HOH HOH . G 3 HOH B 21 221 49 HOH HOH . G 3 HOH B 22 222 39 HOH HOH . G 3 HOH B 23 223 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . C 2 4.927 -12.133 -26.85 1 30.6 ? OH2 1PE 101 A 1 HETATM 2 C C12 1PE . . . C 2 4.948 -12.31 -28.238 1 25.57 ? C12 1PE 101 A 1 HETATM 3 C C22 1PE . . . C 2 6.223 -13.038 -28.657 1 31.58 ? C22 1PE 101 A 1 HETATM 4 O OH3 1PE . . . C 2 6.368 -14.212 -27.912 1 29.68 ? OH3 1PE 101 A 1 HETATM 5 C C13 1PE . . . C 2 7.708 -15.98 -27.042 1 32.69 ? C13 1PE 101 A 1 HETATM 6 C C23 1PE . . . C 2 7.664 -14.744 -27.938 1 32.01 ? C23 1PE 101 A 1 HETATM 7 O OH4 1PE . . . C 2 8.646 -15.786 -26.019 1 36.61 ? OH4 1PE 101 A 1 HETATM 8 C C14 1PE . . . C 2 8.227 -16.34 -23.733 1 30.16 ? C14 1PE 101 A 1 HETATM 9 C C24 1PE . . . C 2 8.723 -16.837 -25.091 1 31.49 ? C24 1PE 101 A 1 HETATM 10 O OH5 1PE . . . C 2 6.839 -16.508 -23.649 1 39.28 ? OH5 1PE 101 A 1 HETATM 11 C C15 1PE . . . C 2 4.89 -16.067 -22.316 1 38.07 ? C15 1PE 101 A 1 HETATM 12 C C25 1PE . . . C 2 6.349 -16.523 -22.336 1 34.61 ? C25 1PE 101 A 1 HETATM 13 O OH6 1PE . . . C 2 4.783 -14.79 -22.88 1 42.29 ? OH6 1PE 101 A 1 HETATM 14 C C16 1PE . . . C 2 3.298 -13.935 -21.203 1 42.71 ? C16 1PE 101 A 1 HETATM 15 C C26 1PE . . . C 2 3.535 -14.177 -22.693 1 37.66 ? C26 1PE 101 A 1 HETATM 16 O OH7 1PE . . . C 2 2.344 -12.922 -21.038 1 45.54 ? OH7 1PE 101 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 16 #