data_6Q2T
#
_model_server_result.job_id            Uc4y-K62lweD2eRhRA-GgA 
_model_server_result.datetime_utc      '2024-10-19 16:22:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6q2t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":602}' 
#
_entry.id    6Q2T 
#
_exptl.entry_id    6Q2T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              678.062 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "N-[(1R)-1-(3-chloro-4'-fluoro[1,1'-biphenyl]-4-yl)-2-(1H-imidazol-1-yl)ethyl]-4-{5-[3-fluoro-5-(5-fluoropyrimidin-4-yl)phenyl]-1,3,4-oxadiazol-2-yl}benzamide" 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6Q2T 
_cell.length_a            117.664 
_cell.length_b            117.664 
_cell.length_c            157.842 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6Q2T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        79 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,P 1 1 
B,N,O,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 M N N 
? 3 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 392 A CYS 449 1_555 C FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc2 C FE HEM . A HEM 601 1_555 D NAZ PJM . A PJM 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc3 B SG CYS 392 B CYS 449 1_555 N FE HEM . B HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc4 N FE HEM . B HEM 601 1_555 O NAZ PJM . B PJM 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
#
_chem_comp.formula           'C36 H23 Cl F3 N7 O2' 
_chem_comp.formula_weight    678.062 
_chem_comp.id                PJM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "N-[(1R)-1-(3-chloro-4'-fluoro[1,1'-biphenyl]-4-yl)-2-(1H-imidazol-1-yl)ethyl]-4-{5-[3-fluoro-5-(5-fluoropyrimidin-4-yl)phenyl]-1,3,4-oxadiazol-2-yl}benzamide" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
NAZ CAT PJM doub 413 n y 
NAZ CAF PJM sing 414 n y 
FAB CBH PJM sing 415 n n 
CAI CBH PJM doub 416 n y 
CAI CAM PJM sing 417 n y 
CAT NBW PJM sing 418 n y 
CBH CAH PJM sing 419 n y 
CAM CBM PJM doub 420 n y 
CAF CAR PJM doub 421 n y 
CAP CAQ PJM doub 422 n y 
CAP CBO PJM sing 423 n y 
CAH CAL PJM doub 424 n y 
CBM CAL PJM sing 425 n y 
CBM CBO PJM sing 426 n n 
NBW CAR PJM sing 427 n y 
NBW CAY PJM sing 428 n n 
CAQ CBR PJM sing 429 n y 
CBO CAW PJM doub 430 n y 
CAY CBV PJM sing 431 n n 
CBR CBV PJM sing 432 n n 
CBR CBK PJM doub 433 n y 
CAW CBK PJM sing 434 n y 
CBV NBE PJM sing 435 n n 
CBK CLA PJM sing 436 n n 
NBE CBG PJM sing 437 n n 
CBG CBL PJM sing 438 n n 
CBG OAA PJM doub 439 n n 
CAJ CBL PJM doub 440 n y 
CAJ CAN PJM sing 441 n y 
CBL CAK PJM sing 442 n y 
CAN CBN PJM doub 443 n y 
CAK CAO PJM doub 444 n y 
CBN CAO PJM sing 445 n y 
CBN CBS PJM sing 446 n n 
CBS NBC PJM doub 447 n y 
CBS OBF PJM sing 448 n y 
NBC NBD PJM sing 449 n y 
OBF CBT PJM sing 450 n y 
NBD CBT PJM doub 451 n y 
CBT CBP PJM sing 452 n n 
CBP CAX PJM doub 453 n y 
CBP CAU PJM sing 454 n y 
CAX CBQ PJM sing 455 n y 
CAU CBI PJM doub 456 n y 
F5 C5 PJM sing 457 n n 
CBQ C4 PJM sing 458 n n 
CBQ CAV PJM doub 459 n y 
C5 C6 PJM doub 460 n y 
C5 C4 PJM sing 461 n y 
CBI CAV PJM sing 462 n y 
CBI FAC PJM sing 463 n n 
C6 N1 PJM sing 464 n y 
C4 N3 PJM doub 465 n y 
N3 C2 PJM sing 466 n y 
N1 C2 PJM doub 467 n y 
C6 H1 PJM sing 468 n n 
C2 H2 PJM sing 469 n n 
CAX H3 PJM sing 470 n n 
CAV H4 PJM sing 471 n n 
CAU H5 PJM sing 472 n n 
CAO H6 PJM sing 473 n n 
CAK H7 PJM sing 474 n n 
CAN H8 PJM sing 475 n n 
CAJ H9 PJM sing 476 n n 
NBE H10 PJM sing 477 n n 
CBV H11 PJM sing 478 n n 
CAY H12 PJM sing 479 n n 
CAY H13 PJM sing 480 n n 
CAR H14 PJM sing 481 n n 
CAF H15 PJM sing 482 n n 
CAT H16 PJM sing 483 n n 
CAW H17 PJM sing 484 n n 
CAQ H18 PJM sing 485 n n 
CAP H19 PJM sing 486 n n 
CAL H20 PJM sing 487 n n 
CAH H21 PJM sing 488 n n 
CAI H22 PJM sing 489 n n 
CAM H23 PJM sing 490 n n 
#
_atom_sites.entry_id                     6Q2T 
_atom_sites.fract_transf_matrix[1][1]    0.008499 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008499 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006335 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 601 540 HEM HEM . 
D 3 PJM A 1 602 601 PJM DRG . 
E 4 DXC A 1 603 610 DXC DTR . 
F 4 DXC A 1 604 620 DXC DTR . 
G 4 DXC A 1 605 630 DXC DTR . 
H 4 DXC A 1 606 640 DXC DTR . 
I 4 DXC A 1 607 650 DXC DTR . 
J 4 DXC A 1 608 660 DXC DTR . 
K 4 DXC A 1 609 670 DXC DTR . 
L 4 DXC A 1 610 680 DXC DTR . 
M 3 PJM A 1 611 700 PJM DRG . 
N 2 HEM B 1 601 540 HEM HEM . 
O 3 PJM B 1 602 601 PJM DRG . 
P 5 HOH A 1 701 14 HOH HOH . 
P 5 HOH A 2 702 13 HOH HOH . 
P 5 HOH A 3 703 7 HOH HOH . 
P 5 HOH A 4 704 4 HOH HOH . 
P 5 HOH A 5 705 15 HOH HOH . 
P 5 HOH A 6 706 22 HOH HOH . 
P 5 HOH A 7 707 8 HOH HOH . 
P 5 HOH A 8 708 3 HOH HOH . 
P 5 HOH A 9 709 23 HOH HOH . 
P 5 HOH A 10 710 29 HOH HOH . 
P 5 HOH A 11 711 12 HOH HOH . 
P 5 HOH A 12 712 10 HOH HOH . 
P 5 HOH A 13 713 25 HOH HOH . 
Q 5 HOH B 1 701 19 HOH HOH . 
Q 5 HOH B 2 702 24 HOH HOH . 
Q 5 HOH B 3 703 5 HOH HOH . 
Q 5 HOH B 4 704 21 HOH HOH . 
Q 5 HOH B 5 705 27 HOH HOH . 
Q 5 HOH B 6 706 20 HOH HOH . 
Q 5 HOH B 7 707 11 HOH HOH . 
Q 5 HOH B 8 708 1 HOH HOH . 
Q 5 HOH B 9 709 16 HOH HOH . 
Q 5 HOH B 10 710 17 HOH HOH . 
Q 5 HOH B 11 711 9 HOH HOH . 
Q 5 HOH B 12 712 2 HOH HOH . 
Q 5 HOH B 13 713 6 HOH HOH . 
Q 5 HOH B 14 714 30 HOH HOH . 
Q 5 HOH B 15 715 26 HOH HOH . 
Q 5 HOH B 16 716 28 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 PJM . . . O 3 8.417 24.274 -22.387 1 116.72 ? C4 PJM 602 B 1 
HETATM 2 C C5 PJM . . . O 3 7.084 23.893 -22.506 1 116.31 ? C5 PJM 602 B 1 
HETATM 3 C C6 PJM . . . O 3 6.101 24.855 -22.708 1 113.08 ? C6 PJM 602 B 1 
HETATM 4 N N1 PJM . . . O 3 6.452 26.207 -22.785 1 109.63 ? N1 PJM 602 B 1 
HETATM 5 N N3 PJM . . . O 3 8.759 25.568 -22.452 1 122.98 ? N3 PJM 602 B 1 
HETATM 6 F F5 PJM . . . O 3 6.739 22.581 -22.432 1 121.16 ? F5 PJM 602 B 1 
HETATM 7 C C2 PJM . . . O 3 7.798 26.564 -22.654 1 118.47 ? C2 PJM 602 B 1 
HETATM 8 C CBQ PJM . . . O 3 9.431 23.347 -22.178 1 118.27 ? CBQ PJM 602 B 1 
HETATM 9 C CAX PJM . . . O 3 10.702 23.828 -21.889 1 118.47 ? CAX PJM 602 B 1 
HETATM 10 C CAV PJM . . . O 3 9.21 21.975 -22.254 1 113.7 ? CAV PJM 602 B 1 
HETATM 11 C CBI PJM . . . O 3 10.261 21.09 -22.037 1 110.82 ? CBI PJM 602 B 1 
HETATM 12 F FAC PJM . . . O 3 10.035 19.742 -22.108 1 86.48 ? FAC PJM 602 B 1 
HETATM 13 C CAU PJM . . . O 3 11.533 21.574 -21.746 1 109.08 ? CAU PJM 602 B 1 
HETATM 14 C CBP PJM . . . O 3 11.755 22.945 -21.685 1 115.32 ? CBP PJM 602 B 1 
HETATM 15 C CBT PJM . . . O 3 12.957 23.422 -21.383 1 114.01 ? CBT PJM 602 B 1 
HETATM 16 O OBF PJM . . . O 3 13.168 24.66 -21.003 1 117.92 ? OBF PJM 602 B 1 
HETATM 17 N NBD PJM . . . O 3 14.091 22.724 -21.335 1 118.7 ? NBD PJM 602 B 1 
HETATM 18 N NBC PJM . . . O 3 14.969 23.441 -20.998 1 117.92 ? NBC PJM 602 B 1 
HETATM 19 C CBS PJM . . . O 3 14.465 24.651 -20.764 1 119.58 ? CBS PJM 602 B 1 
HETATM 20 C CBN PJM . . . O 3 15.13 25.733 -20.377 1 121.58 ? CBN PJM 602 B 1 
HETATM 21 C CAO PJM . . . O 3 14.486 26.954 -20.522 1 129.41 ? CAO PJM 602 B 1 
HETATM 22 C CAK PJM . . . O 3 15.125 28.118 -20.129 1 124.87 ? CAK PJM 602 B 1 
HETATM 23 C CAN PJM . . . O 3 16.405 25.667 -19.824 1 121.7 ? CAN PJM 602 B 1 
HETATM 24 C CAJ PJM . . . O 3 17.047 26.836 -19.428 1 120.69 ? CAJ PJM 602 B 1 
HETATM 25 C CBL PJM . . . O 3 16.403 28.059 -19.592 1 121.76 ? CBL PJM 602 B 1 
HETATM 26 C CBG PJM . . . O 3 16.957 29.276 -19.224 1 110.57 ? CBG PJM 602 B 1 
HETATM 27 O OAA PJM . . . O 3 16.386 30.323 -19.524 1 131.45 ? OAA PJM 602 B 1 
HETATM 28 N NBE PJM . . . O 3 18.076 29.252 -18.496 1 95.43 ? NBE PJM 602 B 1 
HETATM 29 C CBV PJM . . . O 3 18.586 30.536 -18.007 1 83.43 ? CBV PJM 602 B 1 
HETATM 30 C CAY PJM . . . O 3 17.707 30.962 -16.833 1 79.5 ? CAY PJM 602 B 1 
HETATM 31 N NBW PJM . . . O 3 18.221 32.189 -16.202 1 74.54 ? NBW PJM 602 B 1 
HETATM 32 C CAR PJM . . . O 3 18.462 33.378 -16.746 1 77.26 ? CAR PJM 602 B 1 
HETATM 33 C CAF PJM . . . O 3 18.91 34.179 -15.781 1 70.05 ? CAF PJM 602 B 1 
HETATM 34 N NAZ PJM . . . O 3 18.936 33.486 -14.646 1 74.1 ? NAZ PJM 602 B 1 
HETATM 35 C CAT PJM . . . O 3 18.51 32.254 -14.907 1 75.03 ? CAT PJM 602 B 1 
HETATM 36 C CBR PJM . . . O 3 19.89 30.388 -17.578 1 80.63 ? CBR PJM 602 B 1 
HETATM 37 C CBK PJM . . . O 3 20.893 31.155 -18.155 1 87.2 ? CBK PJM 602 B 1 
HETATM 38 CL CLA PJM . . . O 3 20.527 32.289 -19.394 1 87.53 ? CLA PJM 602 B 1 
HETATM 39 C CAW PJM . . . O 3 22.202 31.003 -17.724 1 89.97 ? CAW PJM 602 B 1 
HETATM 40 C CAQ PJM . . . O 3 20.168 29.469 -16.575 1 76.43 ? CAQ PJM 602 B 1 
HETATM 41 C CAP PJM . . . O 3 21.475 29.318 -16.142 1 74.63 ? CAP PJM 602 B 1 
HETATM 42 C CBO PJM . . . O 3 22.477 30.089 -16.716 1 83.03 ? CBO PJM 602 B 1 
HETATM 43 C CBM PJM . . . O 3 23.779 29.911 -16.284 1 89.2 ? CBM PJM 602 B 1 
HETATM 44 C CAL PJM . . . O 3 24.8 30.697 -16.799 1 96.85 ? CAL PJM 602 B 1 
HETATM 45 C CAH PJM . . . O 3 26.103 30.492 -16.364 1 98.01 ? CAH PJM 602 B 1 
HETATM 46 C CBH PJM . . . O 3 26.374 29.502 -15.427 1 87.25 ? CBH PJM 602 B 1 
HETATM 47 F FAB PJM . . . O 3 27.644 29.3 -15.003 1 86.43 ? FAB PJM 602 B 1 
HETATM 48 C CAI PJM . . . O 3 25.347 28.717 -14.917 1 82.35 ? CAI PJM 602 B 1 
HETATM 49 C CAM PJM . . . O 3 24.044 28.919 -15.35 1 85.68 ? CAM PJM 602 B 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           101 
_model_server_stats.create_model_time_ms    79 
_model_server_stats.query_time_ms           405 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           49 
#