data_6Q3A # _model_server_result.job_id qTNuwRTojUUmMU09ulXX-g _model_server_result.datetime_utc '2024-11-26 14:19:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6q3a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":604}' # _entry.id 6Q3A # _exptl.entry_id 6Q3A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6Q3A _cell.length_a 80.725 _cell.length_b 80.725 _cell.length_c 442.575 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q3A _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 248 n n C10 C9 OLC doub 249 n n C10 C11 OLC sing 250 n n C9 C8 OLC sing 251 n n C17 C16 OLC sing 252 z n C11 C12 OLC sing 253 n n C8 C7 OLC sing 254 n n C24 C22 OLC sing 255 n n C24 O25 OLC sing 256 n n C16 C15 OLC sing 257 n n C12 C13 OLC sing 258 n n C7 C6 OLC sing 259 n n C15 C14 OLC sing 260 n n C13 C14 OLC sing 261 n n C6 C5 OLC sing 262 n n C5 C4 OLC sing 263 n n C4 C3 OLC sing 264 n n C3 C2 OLC sing 265 n n C2 C1 OLC sing 266 n n C21 C22 OLC sing 267 n n C21 O20 OLC sing 268 n n C1 O19 OLC doub 269 n n C1 O20 OLC sing 270 n n C22 O23 OLC sing 271 n n C18 H18 OLC sing 272 n n C18 H18A OLC sing 273 n n C18 H18B OLC sing 274 n n C10 H10 OLC sing 275 n n C9 H9 OLC sing 276 n n C17 H17 OLC sing 277 n n C17 H17A OLC sing 278 n n C11 H11 OLC sing 279 n n C11 H11A OLC sing 280 n n C8 H8 OLC sing 281 n n C8 H8A OLC sing 282 n n C24 H24 OLC sing 283 n n C24 H24A OLC sing 284 n n C16 H16 OLC sing 285 n n C16 H16A OLC sing 286 n n C12 H12 OLC sing 287 n n C12 H12A OLC sing 288 n n C7 H7 OLC sing 289 n n C7 H7A OLC sing 290 n n C15 H15 OLC sing 291 n n C15 H15A OLC sing 292 n n C13 H13 OLC sing 293 n n C13 H13A OLC sing 294 n n C6 H6 OLC sing 295 n n C6 H6A OLC sing 296 n n C14 H14 OLC sing 297 n n C14 H14A OLC sing 298 n n C5 H5 OLC sing 299 n n C5 H5A OLC sing 300 n n C4 H4 OLC sing 301 n n C4 H4A OLC sing 302 n n C3 H3 OLC sing 303 n n C3 H3A OLC sing 304 n n C2 H2 OLC sing 305 n n C2 H2A OLC sing 306 n n C21 H21 OLC sing 307 n n C21 H21A OLC sing 308 n n C22 H22 OLC sing 309 n n O25 HO25 OLC sing 310 n n O23 HO23 OLC sing 311 n n # _atom_sites.entry_id 6Q3A _atom_sites.fract_transf_matrix[1][1] 0.012388 _atom_sites.fract_transf_matrix[1][2] 0.007152 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014304 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00226 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 601 1 GOL GOL . C 2 GOL A 1 602 2 GOL GOL . D 2 GOL A 1 603 3 GOL GOL . E 3 OLC A 1 604 1 OLC OLC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . E 3 -33.594 -35.702 -33.407 1 123.31 ? C18 OLC 604 A 1 HETATM 2 C C10 OLC . . . E 3 -32.77 -33.758 -25.954 1 137.96 ? C10 OLC 604 A 1 HETATM 3 C C9 OLC . . . E 3 -33.417 -32.667 -25.59 1 132.9 ? C9 OLC 604 A 1 HETATM 4 C C17 OLC . . . E 3 -32.295 -35.193 -32.787 1 139.65 ? C17 OLC 604 A 1 HETATM 5 C C11 OLC . . . E 3 -31.26 -33.734 -26.185 1 130.64 ? C11 OLC 604 A 1 HETATM 6 C C8 OLC . . . E 3 -32.675 -31.346 -25.397 1 120.37 ? C8 OLC 604 A 1 HETATM 7 C C24 OLC . . . E 3 -25.616 -34.995 -31.162 1 136.51 ? C24 OLC 604 A 1 HETATM 8 C C16 OLC . . . E 3 -32.206 -35.657 -31.334 1 136.66 ? C16 OLC 604 A 1 HETATM 9 C C12 OLC . . . E 3 -30.847 -34.947 -27.017 1 131.85 ? C12 OLC 604 A 1 HETATM 10 C C7 OLC . . . E 3 -32.752 -30.525 -26.684 1 136.03 ? C7 OLC 604 A 1 HETATM 11 C C15 OLC . . . E 3 -30.8 -35.388 -30.803 1 137.91 ? C15 OLC 604 A 1 HETATM 12 C C13 OLC . . . E 3 -31.372 -34.794 -28.444 1 142.47 ? C13 OLC 604 A 1 HETATM 13 C C6 OLC . . . E 3 -31.763 -29.363 -26.613 1 131.87 ? C6 OLC 604 A 1 HETATM 14 C C14 OLC . . . E 3 -30.701 -35.83 -29.344 1 141.82 ? C14 OLC 604 A 1 HETATM 15 C C5 OLC . . . E 3 -30.376 -29.897 -26.262 1 142.76 ? C5 OLC 604 A 1 HETATM 16 C C4 OLC . . . E 3 -29.323 -29.199 -27.119 1 114.91 ? C4 OLC 604 A 1 HETATM 17 C C3 OLC . . . E 3 -27.941 -29.779 -26.82 1 127.23 ? C3 OLC 604 A 1 HETATM 18 C C2 OLC . . . E 3 -27.99 -31.307 -26.843 1 151.37 ? C2 OLC 604 A 1 HETATM 19 C C21 OLC . . . E 3 -26.417 -33.331 -29.482 1 151.13 ? C21 OLC 604 A 1 HETATM 20 C C1 OLC . . . E 3 -27.719 -31.821 -28.256 1 159.9 ? C1 OLC 604 A 1 HETATM 21 C C22 OLC . . . E 3 -26.818 -34.527 -30.343 1 152.9 ? C22 OLC 604 A 1 HETATM 22 O O19 OLC . . . E 3 -27.819 -31.094 -29.186 1 162.87 ? O19 OLC 604 A 1 HETATM 23 O O25 OLC . . . E 3 -24.792 -33.9 -31.454 1 135.56 ? O25 OLC 604 A 1 HETATM 24 O O23 OLC . . . E 3 -27.261 -35.571 -29.52 1 149.37 ? O23 OLC 604 A 1 HETATM 25 O O20 OLC . . . E 3 -27.354 -33.157 -28.458 1 166.41 ? O20 OLC 604 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #