data_6Q6J # _model_server_result.job_id joMFQAbm0YU_qv65zyuCJA _model_server_result.datetime_utc '2024-11-29 09:59:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6q6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6Q6J # _exptl.entry_id 6Q6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Q6J _cell.length_a 49.23 _cell.length_b 130.49 _cell.length_c 157.76 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 16 A ASP 20 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc2 A O ASP 18 A ASP 22 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc3 A OD2 ASP 175 A ASP 179 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc4 A O GLU 181 A GLU 185 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc5 A O PRO 184 A PRO 188 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc6 C CA CA . A CA 301 1_555 H O HOH . A HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc7 C CA CA . A CA 301 1_555 H O HOH . A HOH 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc8 C CA CA . A CA 301 1_555 H O HOH . A HOH 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc9 D CA CA . A CA 302 1_555 H O HOH . A HOH 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc10 D CA CA . A CA 302 1_555 I O HOH . B HOH 413 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc11 D CA CA . A CA 302 1_555 I O HOH . B HOH 466 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc12 B OD1 ASP 16 B ASP 20 1_555 E CA CA . B CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.182 ? metalc ? metalc13 B OD2 ASP 16 B ASP 20 1_555 E CA CA . B CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc14 B O ASP 18 B ASP 22 1_555 E CA CA . B CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc15 B OD1 ASP 175 B ASP 179 1_555 E CA CA . B CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc16 E CA CA . B CA 301 1_555 I O HOH . B HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc17 E CA CA . B CA 301 1_555 I O HOH . B HOH 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc18 E CA CA . B CA 301 1_555 I O HOH . B HOH 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6Q6J _atom_sites.fract_transf_matrix[1][1] 0.020313 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007663 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006339 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 301 1 CA CA . D 2 CA A 1 302 3 CA CA . E 2 CA B 1 301 2 CA CA . F 3 HJT B 1 302 1 HJT HOM . G 4 CL B 1 303 1 CL CL . H 5 HOH A 1 401 195 HOH HOH . H 5 HOH A 2 402 183 HOH HOH . H 5 HOH A 3 403 87 HOH HOH . H 5 HOH A 4 404 126 HOH HOH . H 5 HOH A 5 405 115 HOH HOH . H 5 HOH A 6 406 11 HOH HOH . H 5 HOH A 7 407 133 HOH HOH . H 5 HOH A 8 408 122 HOH HOH . H 5 HOH A 9 409 15 HOH HOH . H 5 HOH A 10 410 22 HOH HOH . H 5 HOH A 11 411 59 HOH HOH . H 5 HOH A 12 412 20 HOH HOH . H 5 HOH A 13 413 51 HOH HOH . H 5 HOH A 14 414 4 HOH HOH . H 5 HOH A 15 415 187 HOH HOH . H 5 HOH A 16 416 24 HOH HOH . H 5 HOH A 17 417 39 HOH HOH . H 5 HOH A 18 418 38 HOH HOH . H 5 HOH A 19 419 50 HOH HOH . H 5 HOH A 20 420 88 HOH HOH . H 5 HOH A 21 421 110 HOH HOH . H 5 HOH A 22 422 58 HOH HOH . H 5 HOH A 23 423 71 HOH HOH . H 5 HOH A 24 424 62 HOH HOH . H 5 HOH A 25 425 43 HOH HOH . H 5 HOH A 26 426 65 HOH HOH . H 5 HOH A 27 427 99 HOH HOH . H 5 HOH A 28 428 117 HOH HOH . H 5 HOH A 29 429 184 HOH HOH . H 5 HOH A 30 430 185 HOH HOH . H 5 HOH A 31 431 16 HOH HOH . H 5 HOH A 32 432 119 HOH HOH . H 5 HOH A 33 433 64 HOH HOH . H 5 HOH A 34 434 70 HOH HOH . H 5 HOH A 35 435 33 HOH HOH . H 5 HOH A 36 436 54 HOH HOH . H 5 HOH A 37 437 46 HOH HOH . H 5 HOH A 38 438 25 HOH HOH . H 5 HOH A 39 439 19 HOH HOH . H 5 HOH A 40 440 105 HOH HOH . H 5 HOH A 41 441 116 HOH HOH . H 5 HOH A 42 442 94 HOH HOH . H 5 HOH A 43 443 8 HOH HOH . H 5 HOH A 44 444 67 HOH HOH . H 5 HOH A 45 445 23 HOH HOH . H 5 HOH A 46 446 84 HOH HOH . H 5 HOH A 47 447 73 HOH HOH . H 5 HOH A 48 448 102 HOH HOH . H 5 HOH A 49 449 107 HOH HOH . H 5 HOH A 50 450 61 HOH HOH . H 5 HOH A 51 451 190 HOH HOH . H 5 HOH A 52 452 191 HOH HOH . H 5 HOH A 53 453 52 HOH HOH . H 5 HOH A 54 454 106 HOH HOH . H 5 HOH A 55 455 193 HOH HOH . H 5 HOH A 56 456 153 HOH HOH . H 5 HOH A 57 457 63 HOH HOH . H 5 HOH A 58 458 151 HOH HOH . H 5 HOH A 59 459 3 HOH HOH . H 5 HOH A 60 460 104 HOH HOH . H 5 HOH A 61 461 171 HOH HOH . H 5 HOH A 62 462 113 HOH HOH . H 5 HOH A 63 463 101 HOH HOH . H 5 HOH A 64 464 124 HOH HOH . H 5 HOH A 65 465 159 HOH HOH . H 5 HOH A 66 466 34 HOH HOH . H 5 HOH A 67 467 127 HOH HOH . H 5 HOH A 68 468 79 HOH HOH . H 5 HOH A 69 469 75 HOH HOH . H 5 HOH A 70 470 188 HOH HOH . H 5 HOH A 71 471 9 HOH HOH . H 5 HOH A 72 472 78 HOH HOH . H 5 HOH A 73 473 10 HOH HOH . H 5 HOH A 74 474 29 HOH HOH . H 5 HOH A 75 475 167 HOH HOH . H 5 HOH A 76 476 55 HOH HOH . H 5 HOH A 77 477 138 HOH HOH . H 5 HOH A 78 478 1 HOH HOH . H 5 HOH A 79 479 194 HOH HOH . H 5 HOH A 80 480 100 HOH HOH . H 5 HOH A 81 481 162 HOH HOH . H 5 HOH A 82 482 192 HOH HOH . H 5 HOH A 83 483 5 HOH HOH . H 5 HOH A 84 484 111 HOH HOH . H 5 HOH A 85 485 178 HOH HOH . H 5 HOH A 86 486 144 HOH HOH . H 5 HOH A 87 487 97 HOH HOH . H 5 HOH A 88 488 137 HOH HOH . H 5 HOH A 89 489 118 HOH HOH . H 5 HOH A 90 490 143 HOH HOH . H 5 HOH A 91 491 80 HOH HOH . H 5 HOH A 92 492 164 HOH HOH . H 5 HOH A 93 493 92 HOH HOH . H 5 HOH A 94 494 189 HOH HOH . I 5 HOH B 1 401 128 HOH HOH . I 5 HOH B 2 402 125 HOH HOH . I 5 HOH B 3 403 135 HOH HOH . I 5 HOH B 4 404 109 HOH HOH . I 5 HOH B 5 405 69 HOH HOH . I 5 HOH B 6 406 131 HOH HOH . I 5 HOH B 7 407 163 HOH HOH . I 5 HOH B 8 408 182 HOH HOH . I 5 HOH B 9 409 2 HOH HOH . I 5 HOH B 10 410 66 HOH HOH . I 5 HOH B 11 411 68 HOH HOH . I 5 HOH B 12 412 155 HOH HOH . I 5 HOH B 13 413 150 HOH HOH . I 5 HOH B 14 414 6 HOH HOH . I 5 HOH B 15 415 12 HOH HOH . I 5 HOH B 16 416 77 HOH HOH . I 5 HOH B 17 417 21 HOH HOH . I 5 HOH B 18 418 57 HOH HOH . I 5 HOH B 19 419 74 HOH HOH . I 5 HOH B 20 420 42 HOH HOH . I 5 HOH B 21 421 108 HOH HOH . I 5 HOH B 22 422 41 HOH HOH . I 5 HOH B 23 423 146 HOH HOH . I 5 HOH B 24 424 180 HOH HOH . I 5 HOH B 25 425 129 HOH HOH . I 5 HOH B 26 426 158 HOH HOH . I 5 HOH B 27 427 31 HOH HOH . I 5 HOH B 28 428 154 HOH HOH . I 5 HOH B 29 429 165 HOH HOH . I 5 HOH B 30 430 26 HOH HOH . I 5 HOH B 31 431 72 HOH HOH . I 5 HOH B 32 432 145 HOH HOH . I 5 HOH B 33 433 40 HOH HOH . I 5 HOH B 34 434 17 HOH HOH . I 5 HOH B 35 435 91 HOH HOH . I 5 HOH B 36 436 27 HOH HOH . I 5 HOH B 37 437 76 HOH HOH . I 5 HOH B 38 438 93 HOH HOH . I 5 HOH B 39 439 103 HOH HOH . I 5 HOH B 40 440 48 HOH HOH . I 5 HOH B 41 441 89 HOH HOH . I 5 HOH B 42 442 14 HOH HOH . I 5 HOH B 43 443 53 HOH HOH . I 5 HOH B 44 444 28 HOH HOH . I 5 HOH B 45 445 45 HOH HOH . I 5 HOH B 46 446 139 HOH HOH . I 5 HOH B 47 447 13 HOH HOH . I 5 HOH B 48 448 90 HOH HOH . I 5 HOH B 49 449 95 HOH HOH . I 5 HOH B 50 450 44 HOH HOH . I 5 HOH B 51 451 32 HOH HOH . I 5 HOH B 52 452 18 HOH HOH . I 5 HOH B 53 453 134 HOH HOH . I 5 HOH B 54 454 49 HOH HOH . I 5 HOH B 55 455 56 HOH HOH . I 5 HOH B 56 456 132 HOH HOH . I 5 HOH B 57 457 136 HOH HOH . I 5 HOH B 58 458 47 HOH HOH . I 5 HOH B 59 459 36 HOH HOH . I 5 HOH B 60 460 35 HOH HOH . I 5 HOH B 61 461 176 HOH HOH . I 5 HOH B 62 462 98 HOH HOH . I 5 HOH B 63 463 37 HOH HOH . I 5 HOH B 64 464 81 HOH HOH . I 5 HOH B 65 465 7 HOH HOH . I 5 HOH B 66 466 149 HOH HOH . I 5 HOH B 67 467 170 HOH HOH . I 5 HOH B 68 468 157 HOH HOH . I 5 HOH B 69 469 148 HOH HOH . I 5 HOH B 70 470 30 HOH HOH . I 5 HOH B 71 471 83 HOH HOH . I 5 HOH B 72 472 112 HOH HOH . I 5 HOH B 73 473 186 HOH HOH . I 5 HOH B 74 474 152 HOH HOH . I 5 HOH B 75 475 174 HOH HOH . I 5 HOH B 76 476 60 HOH HOH . I 5 HOH B 77 477 140 HOH HOH . I 5 HOH B 78 478 130 HOH HOH . I 5 HOH B 79 479 85 HOH HOH . I 5 HOH B 80 480 147 HOH HOH . I 5 HOH B 81 481 175 HOH HOH . I 5 HOH B 82 482 96 HOH HOH . I 5 HOH B 83 483 172 HOH HOH . I 5 HOH B 84 484 181 HOH HOH . I 5 HOH B 85 485 114 HOH HOH . I 5 HOH B 86 486 173 HOH HOH . I 5 HOH B 87 487 141 HOH HOH . I 5 HOH B 88 488 82 HOH HOH . I 5 HOH B 89 489 142 HOH HOH . I 5 HOH B 90 490 179 HOH HOH . I 5 HOH B 91 491 156 HOH HOH . I 5 HOH B 92 492 166 HOH HOH . I 5 HOH B 93 493 169 HOH HOH . I 5 HOH B 94 494 121 HOH HOH . I 5 HOH B 95 495 168 HOH HOH . I 5 HOH B 96 496 177 HOH HOH . I 5 HOH B 97 497 160 HOH HOH . I 5 HOH B 98 498 161 HOH HOH . I 5 HOH B 99 499 86 HOH HOH . I 5 HOH B 100 500 123 HOH HOH . I 5 HOH B 101 501 120 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 15.548 _atom_site.Cartn_y 30.64 _atom_site.Cartn_z 17.734 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #