data_6Q8C # _model_server_result.job_id ax0MVdE-gE6eLOy2i6myTA _model_server_result.datetime_utc '2024-11-02 02:14:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6q8c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":903}' # _entry.id 6Q8C # _exptl.entry_id 6Q8C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Q8C _cell.length_a 49.321 _cell.length_b 82.001 _cell.length_c 227.725 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q8C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 450 A CYS 449 1_555 C ZN ZN . A ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc2 A SG CYS 453 A CYS 452 1_555 C ZN ZN . A ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc3 A SG CYS 491 A CYS 490 1_555 C ZN ZN . A ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc4 A SG CYS 494 A CYS 493 1_555 C ZN ZN . A ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc5 F MG MG . A MG 905 1_555 G O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc6 F MG MG . A MG 905 1_555 G O HOH . A HOH 1059 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc7 F MG MG . A MG 905 1_555 G O HOH . A HOH 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc8 F MG MG . A MG 905 1_555 G O HOH . A HOH 1171 3_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc9 F MG MG . A MG 905 1_555 G O HOH . A HOH 1180 3_454 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc10 F MG MG . A MG 905 1_555 G O HOH . A HOH 1185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6Q8C _atom_sites.fract_transf_matrix[1][1] 0.020275 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004391 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LSU A 1 901 901 LSU LSU . C 3 ZN A 1 902 1 ZN ZN . D 4 EDO A 1 903 2 EDO EDO . E 4 EDO A 1 904 3 EDO EDO . F 5 MG A 1 905 1 MG MG . G 6 HOH A 1 1001 92 HOH HOH . G 6 HOH A 2 1002 3 HOH HOH . G 6 HOH A 3 1003 115 HOH HOH . G 6 HOH A 4 1004 186 HOH HOH . G 6 HOH A 5 1005 219 HOH HOH . G 6 HOH A 6 1006 28 HOH HOH . G 6 HOH A 7 1007 51 HOH HOH . G 6 HOH A 8 1008 96 HOH HOH . G 6 HOH A 9 1009 113 HOH HOH . G 6 HOH A 10 1010 131 HOH HOH . G 6 HOH A 11 1011 1 HOH HOH . G 6 HOH A 12 1012 88 HOH HOH . G 6 HOH A 13 1013 94 HOH HOH . G 6 HOH A 14 1014 33 HOH HOH . G 6 HOH A 15 1015 77 HOH HOH . G 6 HOH A 16 1016 142 HOH HOH . G 6 HOH A 17 1017 54 HOH HOH . G 6 HOH A 18 1018 112 HOH HOH . G 6 HOH A 19 1019 82 HOH HOH . G 6 HOH A 20 1020 41 HOH HOH . G 6 HOH A 21 1021 130 HOH HOH . G 6 HOH A 22 1022 89 HOH HOH . G 6 HOH A 23 1023 144 HOH HOH . G 6 HOH A 24 1024 27 HOH HOH . G 6 HOH A 25 1025 69 HOH HOH . G 6 HOH A 26 1026 98 HOH HOH . G 6 HOH A 27 1027 139 HOH HOH . G 6 HOH A 28 1028 53 HOH HOH . G 6 HOH A 29 1029 72 HOH HOH . G 6 HOH A 30 1030 124 HOH HOH . G 6 HOH A 31 1031 30 HOH HOH . G 6 HOH A 32 1032 67 HOH HOH . G 6 HOH A 33 1033 20 HOH HOH . G 6 HOH A 34 1034 57 HOH HOH . G 6 HOH A 35 1035 125 HOH HOH . G 6 HOH A 36 1036 43 HOH HOH . G 6 HOH A 37 1037 15 HOH HOH . G 6 HOH A 38 1038 56 HOH HOH . G 6 HOH A 39 1039 81 HOH HOH . G 6 HOH A 40 1040 36 HOH HOH . G 6 HOH A 41 1041 193 HOH HOH . G 6 HOH A 42 1042 135 HOH HOH . G 6 HOH A 43 1043 46 HOH HOH . G 6 HOH A 44 1044 64 HOH HOH . G 6 HOH A 45 1045 84 HOH HOH . G 6 HOH A 46 1046 194 HOH HOH . G 6 HOH A 47 1047 109 HOH HOH . G 6 HOH A 48 1048 12 HOH HOH . G 6 HOH A 49 1049 55 HOH HOH . G 6 HOH A 50 1050 137 HOH HOH . G 6 HOH A 51 1051 42 HOH HOH . G 6 HOH A 52 1052 18 HOH HOH . G 6 HOH A 53 1053 37 HOH HOH . G 6 HOH A 54 1054 22 HOH HOH . G 6 HOH A 55 1055 79 HOH HOH . G 6 HOH A 56 1056 62 HOH HOH . G 6 HOH A 57 1057 80 HOH HOH . G 6 HOH A 58 1058 140 HOH HOH . G 6 HOH A 59 1059 217 HOH HOH . G 6 HOH A 60 1060 85 HOH HOH . G 6 HOH A 61 1061 163 HOH HOH . G 6 HOH A 62 1062 60 HOH HOH . G 6 HOH A 63 1063 44 HOH HOH . G 6 HOH A 64 1064 63 HOH HOH . G 6 HOH A 65 1065 50 HOH HOH . G 6 HOH A 66 1066 34 HOH HOH . G 6 HOH A 67 1067 148 HOH HOH . G 6 HOH A 68 1068 71 HOH HOH . G 6 HOH A 69 1069 107 HOH HOH . G 6 HOH A 70 1070 213 HOH HOH . G 6 HOH A 71 1071 187 HOH HOH . G 6 HOH A 72 1072 119 HOH HOH . G 6 HOH A 73 1073 9 HOH HOH . G 6 HOH A 74 1074 167 HOH HOH . G 6 HOH A 75 1075 4 HOH HOH . G 6 HOH A 76 1076 17 HOH HOH . G 6 HOH A 77 1077 159 HOH HOH . G 6 HOH A 78 1078 26 HOH HOH . G 6 HOH A 79 1079 31 HOH HOH . G 6 HOH A 80 1080 25 HOH HOH . G 6 HOH A 81 1081 70 HOH HOH . G 6 HOH A 82 1082 86 HOH HOH . G 6 HOH A 83 1083 47 HOH HOH . G 6 HOH A 84 1084 74 HOH HOH . G 6 HOH A 85 1085 126 HOH HOH . G 6 HOH A 86 1086 83 HOH HOH . G 6 HOH A 87 1087 35 HOH HOH . G 6 HOH A 88 1088 173 HOH HOH . G 6 HOH A 89 1089 179 HOH HOH . G 6 HOH A 90 1090 78 HOH HOH . G 6 HOH A 91 1091 68 HOH HOH . G 6 HOH A 92 1092 24 HOH HOH . G 6 HOH A 93 1093 114 HOH HOH . G 6 HOH A 94 1094 49 HOH HOH . G 6 HOH A 95 1095 13 HOH HOH . G 6 HOH A 96 1096 116 HOH HOH . G 6 HOH A 97 1097 58 HOH HOH . G 6 HOH A 98 1098 2 HOH HOH . G 6 HOH A 99 1099 21 HOH HOH . G 6 HOH A 100 1100 38 HOH HOH . G 6 HOH A 101 1101 14 HOH HOH . G 6 HOH A 102 1102 7 HOH HOH . G 6 HOH A 103 1103 11 HOH HOH . G 6 HOH A 104 1104 16 HOH HOH . G 6 HOH A 105 1105 141 HOH HOH . G 6 HOH A 106 1106 95 HOH HOH . G 6 HOH A 107 1107 52 HOH HOH . G 6 HOH A 108 1108 10 HOH HOH . G 6 HOH A 109 1109 19 HOH HOH . G 6 HOH A 110 1110 149 HOH HOH . G 6 HOH A 111 1111 6 HOH HOH . G 6 HOH A 112 1112 129 HOH HOH . G 6 HOH A 113 1113 5 HOH HOH . G 6 HOH A 114 1114 76 HOH HOH . G 6 HOH A 115 1115 123 HOH HOH . G 6 HOH A 116 1116 73 HOH HOH . G 6 HOH A 117 1117 118 HOH HOH . G 6 HOH A 118 1118 108 HOH HOH . G 6 HOH A 119 1119 128 HOH HOH . G 6 HOH A 120 1120 45 HOH HOH . G 6 HOH A 121 1121 176 HOH HOH . G 6 HOH A 122 1122 87 HOH HOH . G 6 HOH A 123 1123 65 HOH HOH . G 6 HOH A 124 1124 111 HOH HOH . G 6 HOH A 125 1125 170 HOH HOH . G 6 HOH A 126 1126 110 HOH HOH . G 6 HOH A 127 1127 61 HOH HOH . G 6 HOH A 128 1128 117 HOH HOH . G 6 HOH A 129 1129 29 HOH HOH . G 6 HOH A 130 1130 122 HOH HOH . G 6 HOH A 131 1131 157 HOH HOH . G 6 HOH A 132 1132 180 HOH HOH . G 6 HOH A 133 1133 169 HOH HOH . G 6 HOH A 134 1134 211 HOH HOH . G 6 HOH A 135 1135 177 HOH HOH . G 6 HOH A 136 1136 147 HOH HOH . G 6 HOH A 137 1137 181 HOH HOH . G 6 HOH A 138 1138 215 HOH HOH . G 6 HOH A 139 1139 201 HOH HOH . G 6 HOH A 140 1140 162 HOH HOH . G 6 HOH A 141 1141 8 HOH HOH . G 6 HOH A 142 1142 208 HOH HOH . G 6 HOH A 143 1143 40 HOH HOH . G 6 HOH A 144 1144 152 HOH HOH . G 6 HOH A 145 1145 212 HOH HOH . G 6 HOH A 146 1146 120 HOH HOH . G 6 HOH A 147 1147 204 HOH HOH . G 6 HOH A 148 1148 75 HOH HOH . G 6 HOH A 149 1149 198 HOH HOH . G 6 HOH A 150 1150 155 HOH HOH . G 6 HOH A 151 1151 158 HOH HOH . G 6 HOH A 152 1152 103 HOH HOH . G 6 HOH A 153 1153 220 HOH HOH . G 6 HOH A 154 1154 133 HOH HOH . G 6 HOH A 155 1155 23 HOH HOH . G 6 HOH A 156 1156 39 HOH HOH . G 6 HOH A 157 1157 66 HOH HOH . G 6 HOH A 158 1158 102 HOH HOH . G 6 HOH A 159 1159 156 HOH HOH . G 6 HOH A 160 1160 127 HOH HOH . G 6 HOH A 161 1161 197 HOH HOH . G 6 HOH A 162 1162 172 HOH HOH . G 6 HOH A 163 1163 90 HOH HOH . G 6 HOH A 164 1164 106 HOH HOH . G 6 HOH A 165 1165 99 HOH HOH . G 6 HOH A 166 1166 100 HOH HOH . G 6 HOH A 167 1167 132 HOH HOH . G 6 HOH A 168 1168 161 HOH HOH . G 6 HOH A 169 1169 182 HOH HOH . G 6 HOH A 170 1170 160 HOH HOH . G 6 HOH A 171 1171 214 HOH HOH . G 6 HOH A 172 1172 97 HOH HOH . G 6 HOH A 173 1173 32 HOH HOH . G 6 HOH A 174 1174 48 HOH HOH . G 6 HOH A 175 1175 210 HOH HOH . G 6 HOH A 176 1176 150 HOH HOH . G 6 HOH A 177 1177 184 HOH HOH . G 6 HOH A 178 1178 205 HOH HOH . G 6 HOH A 179 1179 101 HOH HOH . G 6 HOH A 180 1180 216 HOH HOH . G 6 HOH A 181 1181 200 HOH HOH . G 6 HOH A 182 1182 199 HOH HOH . G 6 HOH A 183 1183 165 HOH HOH . G 6 HOH A 184 1184 174 HOH HOH . G 6 HOH A 185 1185 218 HOH HOH . G 6 HOH A 186 1186 190 HOH HOH . G 6 HOH A 187 1187 203 HOH HOH . G 6 HOH A 188 1188 207 HOH HOH . G 6 HOH A 189 1189 104 HOH HOH . G 6 HOH A 190 1190 206 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 -8.809 8.006 -46.413 1 60.5 ? C1 EDO 903 A 1 HETATM 2 O O1 EDO . . . D 4 -9.818 7.782 -45.419 1 45.16 ? O1 EDO 903 A 1 HETATM 3 C C2 EDO . . . D 4 -9.344 7.657 -47.8 1 64.84 ? C2 EDO 903 A 1 HETATM 4 O O2 EDO . . . D 4 -10.502 8.448 -48.093 1 62.29 ? O2 EDO 903 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 4 #