data_6Q9B # _model_server_result.job_id c9dPoFcV6xcjkdqAXeXLkA _model_server_result.datetime_utc '2025-03-06 09:57:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6q9b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"IA","auth_seq_id":701}' # _entry.id 6Q9B # _exptl.entry_id 6Q9B _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 790.145 _entity.id 32 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Q9B _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q9B _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 29-meric _pdbx_struct_assembly.oligomeric_count 29 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 32 IA N N ? 32 KA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 I SG CYS 17 AK CYS 17 1_555 I SG CYS 74 AK CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 I SG CYS 94 AK CYS 94 1_555 I SG CYS 114 AK CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 L SG CYS 35 A8 CYS 35 1_555 L SG CYS 65 A8 CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 L SG CYS 45 A8 CYS 45 1_555 L SG CYS 55 A8 CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 L SG CYS 77 A8 CYS 77 1_555 L SG CYS 109 A8 CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf6 L SG CYS 87 A8 CYS 87 1_555 L SG CYS 99 A8 CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 M SG CYS 76 BJ CYS 76 1_555 M SG CYS 83 BJ CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf8 M SG CYS 112 BJ CYS 112 1_555 M SG CYS 124 BJ CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf9 O SG CYS 32 S5 CYS 32 1_555 O SG CYS 65 S5 CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf10 O SG CYS 42 S5 CYS 42 1_555 O SG CYS 55 S5 CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf11 V SG CYS 58 B7 CYS 58 1_555 V SG CYS 89 B7 CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf12 V SG CYS 68 B7 CYS 68 1_555 V SG CYS 79 B7 CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 K OG SER 44 AB SER 44 1_555 NA P1 ZMP . AB ZMP 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.499 ? # _chem_comp.formula 'C44 H88 N O8 P' _chem_comp.formula_weight 790.145 _chem_comp.id PC1 _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLCHOLINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O12 P PC1 sing 622 n n P O14 PC1 doub 623 n n P O13 PC1 sing 624 n n P O11 PC1 sing 625 n n O13 C11 PC1 sing 626 n n C11 C12 PC1 sing 627 n n C11 H111 PC1 sing 628 n n C11 H112 PC1 sing 629 n n C12 N PC1 sing 630 n n C12 H121 PC1 sing 631 n n C12 H122 PC1 sing 632 n n N C13 PC1 sing 633 n n N C14 PC1 sing 634 n n N C15 PC1 sing 635 n n C13 H131 PC1 sing 636 n n C13 H132 PC1 sing 637 n n C13 H133 PC1 sing 638 n n C14 H141 PC1 sing 639 n n C14 H142 PC1 sing 640 n n C14 H143 PC1 sing 641 n n C15 H151 PC1 sing 642 n n C15 H152 PC1 sing 643 n n C15 H153 PC1 sing 644 n n O11 C1 PC1 sing 645 n n C1 C2 PC1 sing 646 n n C1 H11 PC1 sing 647 n n C1 H12 PC1 sing 648 n n C2 O21 PC1 sing 649 n n C2 C3 PC1 sing 650 n n C2 H2 PC1 sing 651 n n O21 C21 PC1 sing 652 n n C21 O22 PC1 doub 653 n n C21 C22 PC1 sing 654 n n C22 C23 PC1 sing 655 n n C22 H221 PC1 sing 656 n n C22 H222 PC1 sing 657 n n C23 C24 PC1 sing 658 n n C23 H231 PC1 sing 659 n n C23 H232 PC1 sing 660 n n C24 C25 PC1 sing 661 n n C24 H241 PC1 sing 662 n n C24 H242 PC1 sing 663 n n C25 C26 PC1 sing 664 n n C25 H251 PC1 sing 665 n n C25 H252 PC1 sing 666 n n C26 C27 PC1 sing 667 n n C26 H261 PC1 sing 668 n n C26 H262 PC1 sing 669 n n C27 C28 PC1 sing 670 n n C27 H271 PC1 sing 671 n n C27 H272 PC1 sing 672 n n C28 C29 PC1 sing 673 n n C28 H281 PC1 sing 674 n n C28 H282 PC1 sing 675 n n C29 C2A PC1 sing 676 n n C29 H291 PC1 sing 677 n n C29 H292 PC1 sing 678 n n C2A C2B PC1 sing 679 n n C2A H2A1 PC1 sing 680 n n C2A H2A2 PC1 sing 681 n n C2B C2C PC1 sing 682 n n C2B H2B1 PC1 sing 683 n n C2B H2B2 PC1 sing 684 n n C2C C2D PC1 sing 685 n n C2C H2C1 PC1 sing 686 n n C2C H2C2 PC1 sing 687 n n C2D C2E PC1 sing 688 n n C2D H2D1 PC1 sing 689 n n C2D H2D2 PC1 sing 690 n n C2E C2F PC1 sing 691 n n C2E H2E1 PC1 sing 692 n n C2E H2E2 PC1 sing 693 n n C2F C2G PC1 sing 694 n n C2F H2F1 PC1 sing 695 n n C2F H2F2 PC1 sing 696 n n C2G C2H PC1 sing 697 n n C2G H2G1 PC1 sing 698 n n C2G H2G2 PC1 sing 699 n n C2H C2I PC1 sing 700 n n C2H H2H1 PC1 sing 701 n n C2H H2H2 PC1 sing 702 n n C2I H2I1 PC1 sing 703 n n C2I H2I2 PC1 sing 704 n n C2I H2I3 PC1 sing 705 n n C3 O31 PC1 sing 706 n n C3 H31 PC1 sing 707 n n C3 H32 PC1 sing 708 n n O31 C31 PC1 sing 709 n n C31 O32 PC1 doub 710 n n C31 C32 PC1 sing 711 n n C32 C33 PC1 sing 712 n n C32 H321 PC1 sing 713 n n C32 H322 PC1 sing 714 n n C33 C34 PC1 sing 715 n n C33 H331 PC1 sing 716 n n C33 H332 PC1 sing 717 n n C34 C35 PC1 sing 718 n n C34 H341 PC1 sing 719 n n C34 H342 PC1 sing 720 n n C35 C36 PC1 sing 721 n n C35 H351 PC1 sing 722 n n C35 H352 PC1 sing 723 n n C36 C37 PC1 sing 724 n n C36 H361 PC1 sing 725 n n C36 H362 PC1 sing 726 n n C37 C38 PC1 sing 727 n n C37 H371 PC1 sing 728 n n C37 H372 PC1 sing 729 n n C38 C39 PC1 sing 730 n n C38 H381 PC1 sing 731 n n C38 H382 PC1 sing 732 n n C39 C3A PC1 sing 733 n n C39 H391 PC1 sing 734 n n C39 H392 PC1 sing 735 n n C3A C3B PC1 sing 736 n n C3A H3A1 PC1 sing 737 n n C3A H3A2 PC1 sing 738 n n C3B C3C PC1 sing 739 n n C3B H3B1 PC1 sing 740 n n C3B H3B2 PC1 sing 741 n n C3C C3D PC1 sing 742 n n C3C H3C1 PC1 sing 743 n n C3C H3C2 PC1 sing 744 n n C3D C3E PC1 sing 745 n n C3D H3D1 PC1 sing 746 n n C3D H3D2 PC1 sing 747 n n C3E C3F PC1 sing 748 n n C3E H3E1 PC1 sing 749 n n C3E H3E2 PC1 sing 750 n n C3F C3G PC1 sing 751 n n C3F H3F1 PC1 sing 752 n n C3F H3F2 PC1 sing 753 n n C3G C3H PC1 sing 754 n n C3G H3G1 PC1 sing 755 n n C3G H3G2 PC1 sing 756 n n C3H C3I PC1 sing 757 n n C3H H3H1 PC1 sing 758 n n C3H H3H2 PC1 sing 759 n n C3I H3I1 PC1 sing 760 n n C3I H3I2 PC1 sing 761 n n C3I H3I3 PC1 sing 762 n n # _atom_sites.entry_id 6Q9B _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code DA 30 3PE D6 1 501 501 3PE 3PE . EA 31 CDL D5 1 901 901 CDL CDL . FA 30 3PE D5 1 902 902 3PE 3PE . GA 30 3PE D5 1 903 702 3PE 3PE . HA 31 CDL D5 1 904 502 CDL CDL . IA 32 PC1 D4 1 701 701 PC1 PC1 . JA 30 3PE D4 1 702 703 3PE 3PE . KA 32 PC1 D4 1 703 503 PC1 PC1 . LA 31 CDL AK 1 501 501 CDL CDL . MA 31 CDL B5 1 201 502 CDL CDL . NA 33 ZMP AB 1 101 101 ZMP ZMP . OA 30 3PE A8 1 301 301 3PE 3PE . PA 30 3PE B4 1 201 506 3PE 3PE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O12 PC1 . . . IA 32 408.062 285.455 358.781 1 73.01 ? O12 PC1 701 D4 1 HETATM 2 P P PC1 . . . IA 32 407.578 284.73 359.976 1 73.01 ? P PC1 701 D4 1 HETATM 3 O O14 PC1 . . . IA 32 406.261 285.08 360.549 1 73.01 ? O14 PC1 701 D4 1 HETATM 4 O O13 PC1 . . . IA 32 407.596 283.178 359.624 1 73.01 ? O13 PC1 701 D4 1 HETATM 5 C C11 PC1 . . . IA 32 408.125 282.2 360.545 1 73.01 ? C11 PC1 701 D4 1 HETATM 6 C C12 PC1 . . . IA 32 407.447 280.942 360.087 1 73.01 ? C12 PC1 701 D4 1 HETATM 7 N N PC1 . . . IA 32 407.905 279.673 360.74 1 73.01 ? N PC1 701 D4 1 HETATM 8 C C13 PC1 . . . IA 32 407.672 279.753 362.215 1 73.01 ? C13 PC1 701 D4 1 HETATM 9 C C14 PC1 . . . IA 32 407.153 278.507 360.183 1 73.01 ? C14 PC1 701 D4 1 HETATM 10 C C15 PC1 . . . IA 32 409.366 279.476 360.488 1 73.01 ? C15 PC1 701 D4 1 HETATM 11 O O11 PC1 . . . IA 32 408.687 284.884 361.11 1 73.01 ? O11 PC1 701 D4 1 HETATM 12 C C1 PC1 . . . IA 32 408.996 286.205 361.595 1 73.01 ? C1 PC1 701 D4 1 HETATM 13 C C2 PC1 . . . IA 32 408.894 286.221 363.092 1 73.01 ? C2 PC1 701 D4 1 HETATM 14 O O21 PC1 . . . IA 32 409.979 285.403 363.627 1 73.01 ? O21 PC1 701 D4 1 HETATM 15 C C21 PC1 . . . IA 32 411.006 286.056 364.184 1 73.01 ? C21 PC1 701 D4 1 HETATM 16 O O22 PC1 . . . IA 32 411.1 287.252 364.212 1 73.01 ? O22 PC1 701 D4 1 HETATM 17 C C22 PC1 . . . IA 32 412.005 285.105 364.77 1 73.01 ? C22 PC1 701 D4 1 HETATM 18 C C23 PC1 . . . IA 32 412.356 285.441 366.214 1 73.01 ? C23 PC1 701 D4 1 HETATM 19 C C3 PC1 . . . IA 32 407.598 285.63 363.565 1 73.01 ? C3 PC1 701 D4 1 HETATM 20 O O31 PC1 . . . IA 32 406.569 286.637 363.438 1 73.01 ? O31 PC1 701 D4 1 HETATM 21 C C31 PC1 . . . IA 32 406.283 287.332 364.539 1 73.01 ? C31 PC1 701 D4 1 HETATM 22 O O32 PC1 . . . IA 32 406.844 287.176 365.589 1 73.01 ? O32 PC1 701 D4 1 HETATM 23 C C32 PC1 . . . IA 32 405.178 288.315 364.301 1 73.01 ? C32 PC1 701 D4 1 HETATM 24 C C33 PC1 . . . IA 32 404.398 288.609 365.572 1 73.01 ? C33 PC1 701 D4 1 HETATM 25 C C34 PC1 . . . IA 32 403.378 289.718 365.405 1 73.01 ? C34 PC1 701 D4 1 HETATM 26 C C35 PC1 . . . IA 32 402.496 289.939 366.62 1 73.01 ? C35 PC1 701 D4 1 HETATM 27 C C36 PC1 . . . IA 32 401.467 291.031 366.419 1 73.01 ? C36 PC1 701 D4 1 HETATM 28 C C37 PC1 . . . IA 32 400.413 291.121 367.505 1 73.01 ? C37 PC1 701 D4 1 HETATM 29 C C38 PC1 . . . IA 32 399.482 292.298 367.308 1 73.01 ? C38 PC1 701 D4 1 HETATM 30 C C39 PC1 . . . IA 32 398.349 292.404 368.31 1 73.01 ? C39 PC1 701 D4 1 HETATM 31 C C3A PC1 . . . IA 32 397.524 293.662 368.121 1 73.01 ? C3A PC1 701 D4 1 HETATM 32 C C3B PC1 . . . IA 32 397.099 293.873 366.679 1 73.01 ? C3B PC1 701 D4 1 HETATM 33 C C3C PC1 . . . IA 32 396.398 295.188 366.401 1 73.01 ? C3C PC1 701 D4 1 HETATM 34 C C3D PC1 . . . IA 32 395.93 295.331 364.963 1 73.01 ? C3D PC1 701 D4 1 HETATM 35 C C3E PC1 . . . IA 32 397.034 295.231 363.929 1 73.01 ? C3E PC1 701 D4 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 35 #