data_6Q9S # _model_server_result.job_id iwFz7u7gkZ7XMsEzTkzWJg _model_server_result.datetime_utc '2024-11-29 22:12:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6q9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":204}' # _entry.id 6Q9S # _exptl.entry_id 6Q9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 264.315 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6Q9S _cell.length_a 93.581 _cell.length_b 93.581 _cell.length_c 198.467 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Q9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,K,BA 1 1 B,L,M,N,O,P,Q,R,S,T,U,V,CA 2 1 C,W,X,Y,Z,AA,DA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 K N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 X N N ? 3 Y N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LYS 52 A LYS 64 1_555 J NA NA . A NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc2 A O GLN 53 A GLN 65 1_555 J NA NA . A NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.166 ? metalc ? metalc3 E OAM O4B . A O4B 202 1_555 I NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.136 ? metalc ? metalc4 E OAQ O4B . A O4B 202 1_555 I NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.177 ? metalc ? metalc5 E OAP O4B . A O4B 202 1_555 I NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.933 ? metalc ? metalc6 E OAN O4B . A O4B 202 1_555 I NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.025 ? metalc ? metalc7 J NA NA . A NA 207 1_555 K OAQ O4B . A O4B 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.096 ? metalc ? metalc8 J NA NA . A NA 207 1_555 K OAR O4B . A O4B 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.06 ? metalc ? metalc9 J NA NA . A NA 207 1_555 K OAP O4B . A O4B 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? metalc ? metalc10 J NA NA . A NA 207 1_555 K OAM O4B . A O4B 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.934 ? metalc ? metalc11 J NA NA . A NA 207 1_555 K OAN O4B . A O4B 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.115 ? metalc ? metalc12 Q OAN O4B . C O4B 206 1_555 V NA NA . C NA 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.077 ? # _chem_comp.formula 'C12 H24 O6' _chem_comp.formula_weight 264.315 _chem_comp.id O4B _chem_comp.mon_nstd_flag . _chem_comp.name 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA OAM O4B sing 337 n n CAA CAB O4B sing 338 n n OAM CAC O4B sing 339 n n CAC CAD O4B sing 340 n n CAD OAO O4B sing 341 n n OAO CAG O4B sing 342 n n CAG CAH O4B sing 343 n n CAH OAQ O4B sing 344 n n OAQ CAK O4B sing 345 n n CAK CAL O4B sing 346 n n CAL OAR O4B sing 347 n n OAR CAJ O4B sing 348 n n CAJ CAI O4B sing 349 n n CAI OAP O4B sing 350 n n OAP CAF O4B sing 351 n n CAF CAE O4B sing 352 n n CAE OAN O4B sing 353 n n OAN CAB O4B sing 354 n n CAA HAA1 O4B sing 355 n n CAA HAA2 O4B sing 356 n n CAB HAB1 O4B sing 357 n n CAB HAB2 O4B sing 358 n n CAC HAC1 O4B sing 359 n n CAC HAC2 O4B sing 360 n n CAD HAD1 O4B sing 361 n n CAD HAD2 O4B sing 362 n n CAG HAG1 O4B sing 363 n n CAG HAG2 O4B sing 364 n n CAH HAH1 O4B sing 365 n n CAH HAH2 O4B sing 366 n n CAK HAK1 O4B sing 367 n n CAK HAK2 O4B sing 368 n n CAL HAL1 O4B sing 369 n n CAL HAL2 O4B sing 370 n n CAJ HAJ1 O4B sing 371 n n CAJ HAJ2 O4B sing 372 n n CAI HAI1 O4B sing 373 n n CAI HAI2 O4B sing 374 n n CAF HAF1 O4B sing 375 n n CAF HAF2 O4B sing 376 n n CAE HAE1 O4B sing 377 n n CAE HAE2 O4B sing 378 n n # _atom_sites.entry_id 6Q9S _atom_sites.fract_transf_matrix[1][1] 0.010686 _atom_sites.fract_transf_matrix[1][2] 0.00617 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012339 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005039 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HRN A 1 201 1 HRN LI1 . E 3 O4B A 1 202 4 O4B 18C . F 3 O4B A 1 203 5 O4B 18C . G 3 O4B A 1 204 9 O4B 18C . H 4 SO4 A 1 205 5 SO4 SO4 . I 5 NA A 1 206 1 NA NA . J 5 NA A 1 207 3 NA NA . K 3 O4B A 1 208 3 O4B 18C . L 2 HRN C 1 201 1 HRN LI1 . M 3 O4B C 1 202 1 O4B 18C . N 3 O4B C 1 203 6 O4B 18C . O 3 O4B C 1 204 7 O4B 18C . P 3 O4B C 1 205 8 O4B 18C . Q 3 O4B C 1 206 11 O4B 18C . R 3 O4B C 1 207 12 O4B 18C . S 3 O4B C 1 208 13 O4B 18C . T 4 SO4 C 1 209 1 SO4 SO4 . U 4 SO4 C 1 210 3 SO4 SO4 . V 5 NA C 1 211 2 NA NA . W 2 HRN B 1 201 1 HRN LI1 . X 3 O4B B 1 202 2 O4B 18C . Y 3 O4B B 1 203 10 O4B 18C . Z 4 SO4 B 1 204 2 SO4 SO4 . AA 4 SO4 B 1 205 4 SO4 SO4 . BA 6 HOH A 1 301 10 HOH HOH . BA 6 HOH A 2 302 8 HOH HOH . BA 6 HOH A 3 303 27 HOH HOH . BA 6 HOH A 4 304 21 HOH HOH . BA 6 HOH A 5 305 20 HOH HOH . BA 6 HOH A 6 306 32 HOH HOH . BA 6 HOH A 7 307 9 HOH HOH . BA 6 HOH A 8 308 11 HOH HOH . BA 6 HOH A 9 309 12 HOH HOH . BA 6 HOH A 10 310 2 HOH HOH . BA 6 HOH A 11 311 16 HOH HOH . BA 6 HOH A 12 312 7 HOH HOH . CA 6 HOH C 1 301 6 HOH HOH . CA 6 HOH C 2 302 1 HOH HOH . CA 6 HOH C 3 303 15 HOH HOH . CA 6 HOH C 4 304 30 HOH HOH . CA 6 HOH C 5 305 33 HOH HOH . CA 6 HOH C 6 306 4 HOH HOH . CA 6 HOH C 7 307 17 HOH HOH . CA 6 HOH C 8 308 13 HOH HOH . CA 6 HOH C 9 309 34 HOH HOH . CA 6 HOH C 10 310 31 HOH HOH . CA 6 HOH C 11 311 19 HOH HOH . CA 6 HOH C 12 312 5 HOH HOH . CA 6 HOH C 13 313 35 HOH HOH . DA 6 HOH B 1 301 28 HOH HOH . DA 6 HOH B 2 302 24 HOH HOH . DA 6 HOH B 3 303 3 HOH HOH . DA 6 HOH B 4 304 22 HOH HOH . DA 6 HOH B 5 305 29 HOH HOH . DA 6 HOH B 6 306 18 HOH HOH . DA 6 HOH B 7 307 25 HOH HOH . DA 6 HOH B 8 308 26 HOH HOH . DA 6 HOH B 9 309 23 HOH HOH . DA 6 HOH B 10 310 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA O4B . . . O 3 42.911 -6.353 -47.896 1 81.05 ? CAA O4B 204 C 1 HETATM 2 O OAM O4B . . . O 3 43.729 -7.173 -47.03 1 81.51 ? OAM O4B 204 C 1 HETATM 3 C CAC O4B . . . O 3 42.975 -8.214 -46.368 1 81.07 ? CAC O4B 204 C 1 HETATM 4 C CAD O4B . . . O 3 43.843 -8.891 -45.277 1 81.04 ? CAD O4B 204 C 1 HETATM 5 O OAO O4B . . . O 3 43.482 -8.425 -43.957 1 80.83 ? OAO O4B 204 C 1 HETATM 6 C CAG O4B . . . O 3 44.626 -8.021 -43.167 1 80.13 ? CAG O4B 204 C 1 HETATM 7 C CAH O4B . . . O 3 44.169 -7.209 -41.926 1 79.5 ? CAH O4B 204 C 1 HETATM 8 O OAQ O4B . . . O 3 44.201 -5.797 -42.217 1 78.7 ? OAQ O4B 204 C 1 HETATM 9 C CAK O4B . . . O 3 44.637 -4.995 -41.105 1 78.93 ? CAK O4B 204 C 1 HETATM 10 C CAL O4B . . . O 3 45.653 -3.942 -41.607 1 79.81 ? CAL O4B 204 C 1 HETATM 11 O OAR O4B . . . O 3 45.001 -3.105 -42.583 1 80.69 ? OAR O4B 204 C 1 HETATM 12 C CAJ O4B . . . O 3 45.7 -1.871 -42.846 1 80.25 ? CAJ O4B 204 C 1 HETATM 13 C CAI O4B . . . O 3 45.407 -1.413 -44.296 1 80.02 ? CAI O4B 204 C 1 HETATM 14 O OAP O4B . . . O 3 44.25 -2.099 -44.828 1 79.36 ? OAP O4B 204 C 1 HETATM 15 C CAF O4B . . . O 3 44.14 -1.97 -46.258 1 78.87 ? CAF O4B 204 C 1 HETATM 16 C CAE O4B . . . O 3 42.979 -2.852 -46.767 1 79.44 ? CAE O4B 204 C 1 HETATM 17 O OAN O4B . . . O 3 43.343 -4.248 -46.686 1 80.36 ? OAN O4B 204 C 1 HETATM 18 C CAB O4B . . . O 3 43.438 -4.897 -47.972 1 80.26 ? CAB O4B 204 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 437 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #