data_6QAD
#
_model_server_result.job_id            Tbu3LUznq1LyahJEqTqG1Q 
_model_server_result.datetime_utc      '2024-11-06 01:24:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6qad 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":617}' 
#
_entry.id    6QAD 
#
_exptl.entry_id    6QAD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              195.237 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6QAD 
_cell.length_a            155.269 
_cell.length_b            155.269 
_cell.length_c            129.922 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6QAD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             M 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide 
3 oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 FUC NAG C1 O1 . O6 HO6 . sing 
2 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
3 ? 3 3 1 FUC NAG C1 O1 . O6 HO6 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B NAG 1 B 1 NAG A 600 NAG 
2 n B FUC 2 B 2 FUC A 609 FUC 
3 n C NAG 1 C 1 NAG A 605 NAG 
3 n C NAG 2 C 2 NAG A 602 NAG 
3 n C FUC 3 C 3 FUC A 610 FUC 
3 n D NAG 1 D 1 NAG A 603 NAG 
3 n D NAG 2 D 2 NAG A 607 NAG 
3 n D FUC 3 D 3 FUC A 608 FUC 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 93 A CYS 65 1_555 A SG CYS 120 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 A SG CYS 280 A CYS 252 1_555 A SG CYS 291 A CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf3 A SG CYS 428 A CYS 400 1_555 A SG CYS 547 A CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
covale ? covale1 A ND2 ASN 85 A ASN 57 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale2 A ND2 ASN 134 A ASN 106 1_555 E C1 NAG . A NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
covale ? covale3 A ND2 ASN 269 A ASN 241 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? 
covale ? covale4 A ND2 ASN 284 A ASN 256 1_555 F C1 NAG . A NAG 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? 
covale ? covale5 A ND2 ASN 369 A ASN 341 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale6 A ND2 ASN 513 A ASN 485 1_555 G C1 NAG . A NAG 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale7 B O6 NAG . B NAG 1 1_555 B C1 FUC . B FUC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
covale ? covale8 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale9 C O6 NAG . C NAG 1 1_555 C C1 FUC . C FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
covale ? covale10 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? 
covale ? covale11 D O6 NAG . D NAG 1 1_555 D C1 FUC . D FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
#
_chem_comp.formula           'C6 H13 N O4 S' 
_chem_comp.formula_weight    195.237 
_chem_comp.id                MES 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 MES sing 335 n n 
O1 C6 MES sing 336 n n 
C2 C3 MES sing 337 n n 
C2 H21 MES sing 338 n n 
C2 H22 MES sing 339 n n 
C3 N4 MES sing 340 n n 
C3 H31 MES sing 341 n n 
C3 H32 MES sing 342 n n 
N4 C5 MES sing 343 n n 
N4 C7 MES sing 344 n n 
N4 HN4 MES sing 345 n n 
C5 C6 MES sing 346 n n 
C5 H51 MES sing 347 n n 
C5 H52 MES sing 348 n n 
C6 H61 MES sing 349 n n 
C6 H62 MES sing 350 n n 
C7 C8 MES sing 351 n n 
C7 H71 MES sing 352 n n 
C7 H72 MES sing 353 n n 
C8 S MES sing 354 n n 
C8 H81 MES sing 355 n n 
C8 H82 MES sing 356 n n 
S O1S MES doub 357 n n 
S O2S MES doub 358 n n 
S O3S MES sing 359 n n 
#
_atom_sites.entry_id                     6QAD 
_atom_sites.fract_transf_matrix[1][1]    0.00644 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00644 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007697 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 NAG A 1 603 601 NAG NAG . 
F 4 NAG A 1 610 604 NAG NAG . 
G 4 NAG A 1 611 606 NAG NAG . 
H 5 DMS A 1 612 701 DMS DMS . 
I 6 GOL A 1 613 901 GOL GOL . 
J 6 GOL A 1 614 1001 GOL GOL . 
K 6 GOL A 1 615 1101 GOL GOL . 
L 6 GOL A 1 616 1401 GOL GOL . 
M 7 MES A 1 617 1601 MES MES . 
N 8 HUZ A 1 618 1701 HUZ 333 . 
O 9 SO4 A 1 619 1 SO4 SO4 . 
P 9 SO4 A 1 620 3 SO4 SO4 . 
Q 9 SO4 A 1 621 4 SO4 SO4 . 
R 9 SO4 A 1 622 5 SO4 SO4 . 
S 10 HOH A 1 701 54 HOH HOH . 
S 10 HOH A 2 702 33 HOH HOH . 
S 10 HOH A 3 703 53 HOH HOH . 
S 10 HOH A 4 704 80 HOH HOH . 
S 10 HOH A 5 705 4 HOH HOH . 
S 10 HOH A 6 706 28 HOH HOH . 
S 10 HOH A 7 707 16 HOH HOH . 
S 10 HOH A 8 708 240 HOH HOH . 
S 10 HOH A 9 709 17 HOH HOH . 
S 10 HOH A 10 710 30 HOH HOH . 
S 10 HOH A 11 711 7 HOH HOH . 
S 10 HOH A 12 712 56 HOH HOH . 
S 10 HOH A 13 713 31 HOH HOH . 
S 10 HOH A 14 714 92 HOH HOH . 
S 10 HOH A 15 715 14 HOH HOH . 
S 10 HOH A 16 716 6 HOH HOH . 
S 10 HOH A 17 717 110 HOH HOH . 
S 10 HOH A 18 718 34 HOH HOH . 
S 10 HOH A 19 719 120 HOH HOH . 
S 10 HOH A 20 720 11 HOH HOH . 
S 10 HOH A 21 721 91 HOH HOH . 
S 10 HOH A 22 722 200 HOH HOH . 
S 10 HOH A 23 723 154 HOH HOH . 
S 10 HOH A 24 724 2 HOH HOH . 
S 10 HOH A 25 725 47 HOH HOH . 
S 10 HOH A 26 726 36 HOH HOH . 
S 10 HOH A 27 727 99 HOH HOH . 
S 10 HOH A 28 728 35 HOH HOH . 
S 10 HOH A 29 729 58 HOH HOH . 
S 10 HOH A 30 730 3 HOH HOH . 
S 10 HOH A 31 731 9 HOH HOH . 
S 10 HOH A 32 732 19 HOH HOH . 
S 10 HOH A 33 733 217 HOH HOH . 
S 10 HOH A 34 734 69 HOH HOH . 
S 10 HOH A 35 735 18 HOH HOH . 
S 10 HOH A 36 736 79 HOH HOH . 
S 10 HOH A 37 737 1 HOH HOH . 
S 10 HOH A 38 738 78 HOH HOH . 
S 10 HOH A 39 739 105 HOH HOH . 
S 10 HOH A 40 740 103 HOH HOH . 
S 10 HOH A 41 741 20 HOH HOH . 
S 10 HOH A 42 742 46 HOH HOH . 
S 10 HOH A 43 743 39 HOH HOH . 
S 10 HOH A 44 744 126 HOH HOH . 
S 10 HOH A 45 745 192 HOH HOH . 
S 10 HOH A 46 746 62 HOH HOH . 
S 10 HOH A 47 747 22 HOH HOH . 
S 10 HOH A 48 748 8 HOH HOH . 
S 10 HOH A 49 749 26 HOH HOH . 
S 10 HOH A 50 750 76 HOH HOH . 
S 10 HOH A 51 751 66 HOH HOH . 
S 10 HOH A 52 752 73 HOH HOH . 
S 10 HOH A 53 753 60 HOH HOH . 
S 10 HOH A 54 754 40 HOH HOH . 
S 10 HOH A 55 755 21 HOH HOH . 
S 10 HOH A 56 756 259 HOH HOH . 
S 10 HOH A 57 757 205 HOH HOH . 
S 10 HOH A 58 758 121 HOH HOH . 
S 10 HOH A 59 759 59 HOH HOH . 
S 10 HOH A 60 760 88 HOH HOH . 
S 10 HOH A 61 761 64 HOH HOH . 
S 10 HOH A 62 762 90 HOH HOH . 
S 10 HOH A 63 763 260 HOH HOH . 
S 10 HOH A 64 764 128 HOH HOH . 
S 10 HOH A 65 765 72 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 MES . . . M 7 15.706 30.4 63.074 1 86.35 ? O1 MES 617 A 1 
HETATM 2 C C2 MES . . . M 7 16.482 31.577 63.304 1 75.49 ? C2 MES 617 A 1 
HETATM 3 C C3 MES . . . M 7 17.974 31.284 63.418 1 96.27 ? C3 MES 617 A 1 
HETATM 4 N N4 MES . . . M 7 18.282 30.406 62.293 1 95.99 ? N4 MES 617 A 1 
HETATM 5 C C5 MES . . . M 7 17.583 29.129 62.206 1 75.48 ? C5 MES 617 A 1 
HETATM 6 C C6 MES . . . M 7 16.433 29.181 63.21 1 59.76 ? C6 MES 617 A 1 
HETATM 7 C C7 MES . . . M 7 19.574 30.523 61.618 1 98.14 ? C7 MES 617 A 1 
HETATM 8 C C8 MES . . . M 7 20.265 31.755 62.199 1 112.02 ? C8 MES 617 A 1 
HETATM 9 S S MES . . . M 7 21.3 32.423 61.082 1 143.96 ? S MES 617 A 1 
HETATM 10 O O1S MES . . . M 7 21.653 31.426 60.046 1 98.4 ? O1S MES 617 A 1 
HETATM 11 O O2S MES . . . M 7 20.648 33.597 60.459 1 107.91 ? O2S MES 617 A 1 
HETATM 12 O O3S MES . . . M 7 22.531 32.876 61.771 1 123.18 ? O3S MES 617 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           12 
#