data_6QAK # _model_server_result.job_id EdSjx-35_SyEEzZ2sjP52g _model_server_result.datetime_utc '2024-10-18 15:30:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qak # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":501}' # _entry.id 6QAK # _exptl.entry_id 6QAK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QAK _cell.length_a 160.38 _cell.length_b 159.59 _cell.length_c 160.61 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QAK _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M 1 1 E,F,G,H,N,O,P,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6QAK _atom_sites.fract_transf_matrix[1][1] 0.006235 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006266 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006226 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 EDO B 1 501 1 EDO EDO . J 3 HOH A 1 501 79 HOH HOH . J 3 HOH A 2 502 45 HOH HOH . J 3 HOH A 3 503 2 HOH HOH . J 3 HOH A 4 504 52 HOH HOH . J 3 HOH A 5 505 37 HOH HOH . J 3 HOH A 6 506 10 HOH HOH . J 3 HOH A 7 507 72 HOH HOH . J 3 HOH A 8 508 33 HOH HOH . J 3 HOH A 9 509 1 HOH HOH . J 3 HOH A 10 510 59 HOH HOH . J 3 HOH A 11 511 56 HOH HOH . J 3 HOH A 12 512 54 HOH HOH . J 3 HOH A 13 513 55 HOH HOH . J 3 HOH A 14 514 64 HOH HOH . J 3 HOH A 15 515 65 HOH HOH . J 3 HOH A 16 516 57 HOH HOH . J 3 HOH A 17 517 67 HOH HOH . J 3 HOH A 18 518 66 HOH HOH . J 3 HOH A 19 519 58 HOH HOH . K 3 HOH B 1 601 47 HOH HOH . K 3 HOH B 2 602 42 HOH HOH . K 3 HOH B 3 603 48 HOH HOH . K 3 HOH B 4 604 44 HOH HOH . K 3 HOH B 5 605 38 HOH HOH . K 3 HOH B 6 606 17 HOH HOH . K 3 HOH B 7 607 41 HOH HOH . K 3 HOH B 8 608 50 HOH HOH . K 3 HOH B 9 609 19 HOH HOH . K 3 HOH B 10 610 31 HOH HOH . K 3 HOH B 11 611 20 HOH HOH . K 3 HOH B 12 612 11 HOH HOH . K 3 HOH B 13 613 4 HOH HOH . K 3 HOH B 14 614 62 HOH HOH . K 3 HOH B 15 615 63 HOH HOH . K 3 HOH B 16 616 61 HOH HOH . L 3 HOH C 1 501 28 HOH HOH . L 3 HOH C 2 502 29 HOH HOH . L 3 HOH C 3 503 34 HOH HOH . L 3 HOH C 4 504 35 HOH HOH . L 3 HOH C 5 505 21 HOH HOH . L 3 HOH C 6 506 43 HOH HOH . L 3 HOH C 7 507 68 HOH HOH . M 3 HOH D 1 501 81 HOH HOH . M 3 HOH D 2 502 12 HOH HOH . M 3 HOH D 3 503 49 HOH HOH . M 3 HOH D 4 504 24 HOH HOH . M 3 HOH D 5 505 23 HOH HOH . M 3 HOH D 6 506 69 HOH HOH . M 3 HOH D 7 507 53 HOH HOH . M 3 HOH D 8 508 71 HOH HOH . M 3 HOH D 9 509 70 HOH HOH . N 3 HOH E 1 501 84 HOH HOH . N 3 HOH E 2 502 40 HOH HOH . N 3 HOH E 3 503 6 HOH HOH . N 3 HOH E 4 504 39 HOH HOH . N 3 HOH E 5 505 73 HOH HOH . O 3 HOH F 1 501 22 HOH HOH . O 3 HOH F 2 502 13 HOH HOH . O 3 HOH F 3 503 9 HOH HOH . O 3 HOH F 4 504 5 HOH HOH . O 3 HOH F 5 505 51 HOH HOH . O 3 HOH F 6 506 25 HOH HOH . O 3 HOH F 7 507 46 HOH HOH . O 3 HOH F 8 508 14 HOH HOH . O 3 HOH F 9 509 76 HOH HOH . O 3 HOH F 10 510 60 HOH HOH . O 3 HOH F 11 511 74 HOH HOH . O 3 HOH F 12 512 87 HOH HOH . P 3 HOH G 1 501 32 HOH HOH . P 3 HOH G 2 502 36 HOH HOH . P 3 HOH G 3 503 8 HOH HOH . P 3 HOH G 4 504 18 HOH HOH . P 3 HOH G 5 505 77 HOH HOH . P 3 HOH G 6 506 26 HOH HOH . P 3 HOH G 7 507 27 HOH HOH . P 3 HOH G 8 508 75 HOH HOH . Q 3 HOH H 1 501 16 HOH HOH . Q 3 HOH H 2 502 15 HOH HOH . Q 3 HOH H 3 503 78 HOH HOH . Q 3 HOH H 4 504 7 HOH HOH . Q 3 HOH H 5 505 80 HOH HOH . Q 3 HOH H 6 506 86 HOH HOH . Q 3 HOH H 7 507 85 HOH HOH . Q 3 HOH H 8 508 83 HOH HOH . Q 3 HOH H 9 509 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 2 52.064 34.233 58.931 1 82.38 ? C1 EDO 501 B 1 HETATM 2 O O1 EDO . . . I 2 50.993 35.178 58.955 1 81.19 ? O1 EDO 501 B 1 HETATM 3 C C2 EDO . . . I 2 53.448 34.939 59.134 1 81.65 ? C2 EDO 501 B 1 HETATM 4 O O2 EDO . . . I 2 54.503 33.99 58.948 1 79.2 ? O2 EDO 501 B 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #