data_6QBU # _model_server_result.job_id xsU-A1TUn1v6jgPs05RytA _model_server_result.datetime_utc '2024-11-26 12:11:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qbu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 6QBU # _exptl.entry_id 6QBU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QBU _cell.length_a 50.548 _cell.length_b 57.551 _cell.length_c 74.594 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QBU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 42 1_555 A SG CYS 46 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf2 A SG CYS 127 A CYS 136 1_555 A SG CYS 194 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf3 A SG CYS 158 A CYS 167 1_555 A SG CYS 174 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 A SG CYS 184 A CYS 191 1_555 A SG CYS 214 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? covale ? covale1 A OG SER 188 A SER 195 1_555 B S22 HVZ . A HVZ 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.628 ? metalc ? metalc1 A OE1 GLU 59 A GLU 70 1_555 F NA NA . A NA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc2 A O ASN 61 A ASN 72 1_555 F NA NA . A NA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc3 A O GLN 64 A GLN 75 1_555 F NA NA . A NA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc4 A OD2 ASP 66 A ASP 77 1_555 F NA NA . A NA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc5 A OE2 GLU 69 A GLU 80 1_555 F NA NA . A NA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc6 F NA NA . A NA 1005 1_555 G O HOH . A HOH 1107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 322 n n P O2 PO4 sing 323 n n P O3 PO4 sing 324 n n P O4 PO4 sing 325 n n # _atom_sites.entry_id 6QBU _atom_sites.fract_transf_matrix[1][1] 0.019783 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017376 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013406 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HVZ A 1 1001 1001 HVZ 011 . C 3 PO4 A 1 1002 2001 PO4 PO4 . D 3 PO4 A 1 1003 2002 PO4 PO4 . E 4 MPD A 1 1004 3001 MPD MPD . F 5 NA A 1 1005 5001 NA NA . G 6 HOH A 1 1101 172 HOH HOH . G 6 HOH A 2 1102 148 HOH HOH . G 6 HOH A 3 1103 144 HOH HOH . G 6 HOH A 4 1104 186 HOH HOH . G 6 HOH A 5 1105 98 HOH HOH . G 6 HOH A 6 1106 160 HOH HOH . G 6 HOH A 7 1107 29 HOH HOH . G 6 HOH A 8 1108 65 HOH HOH . G 6 HOH A 9 1109 196 HOH HOH . G 6 HOH A 10 1110 153 HOH HOH . G 6 HOH A 11 1111 155 HOH HOH . G 6 HOH A 12 1112 166 HOH HOH . G 6 HOH A 13 1113 212 HOH HOH . G 6 HOH A 14 1114 105 HOH HOH . G 6 HOH A 15 1115 189 HOH HOH . G 6 HOH A 16 1116 187 HOH HOH . G 6 HOH A 17 1117 70 HOH HOH . G 6 HOH A 18 1118 122 HOH HOH . G 6 HOH A 19 1119 54 HOH HOH . G 6 HOH A 20 1120 11 HOH HOH . G 6 HOH A 21 1121 64 HOH HOH . G 6 HOH A 22 1122 185 HOH HOH . G 6 HOH A 23 1123 92 HOH HOH . G 6 HOH A 24 1124 17 HOH HOH . G 6 HOH A 25 1125 52 HOH HOH . G 6 HOH A 26 1126 130 HOH HOH . G 6 HOH A 27 1127 72 HOH HOH . G 6 HOH A 28 1128 88 HOH HOH . G 6 HOH A 29 1129 135 HOH HOH . G 6 HOH A 30 1130 28 HOH HOH . G 6 HOH A 31 1131 174 HOH HOH . G 6 HOH A 32 1132 15 HOH HOH . G 6 HOH A 33 1133 121 HOH HOH . G 6 HOH A 34 1134 173 HOH HOH . G 6 HOH A 35 1135 162 HOH HOH . G 6 HOH A 36 1136 55 HOH HOH . G 6 HOH A 37 1137 32 HOH HOH . G 6 HOH A 38 1138 94 HOH HOH . G 6 HOH A 39 1139 89 HOH HOH . G 6 HOH A 40 1140 68 HOH HOH . G 6 HOH A 41 1141 161 HOH HOH . G 6 HOH A 42 1142 14 HOH HOH . G 6 HOH A 43 1143 19 HOH HOH . G 6 HOH A 44 1144 79 HOH HOH . G 6 HOH A 45 1145 109 HOH HOH . G 6 HOH A 46 1146 45 HOH HOH . G 6 HOH A 47 1147 26 HOH HOH . G 6 HOH A 48 1148 62 HOH HOH . G 6 HOH A 49 1149 8 HOH HOH . G 6 HOH A 50 1150 4 HOH HOH . G 6 HOH A 51 1151 33 HOH HOH . G 6 HOH A 52 1152 24 HOH HOH . G 6 HOH A 53 1153 76 HOH HOH . G 6 HOH A 54 1154 201 HOH HOH . G 6 HOH A 55 1155 5 HOH HOH . G 6 HOH A 56 1156 83 HOH HOH . G 6 HOH A 57 1157 39 HOH HOH . G 6 HOH A 58 1158 43 HOH HOH . G 6 HOH A 59 1159 56 HOH HOH . G 6 HOH A 60 1160 35 HOH HOH . G 6 HOH A 61 1161 30 HOH HOH . G 6 HOH A 62 1162 49 HOH HOH . G 6 HOH A 63 1163 131 HOH HOH . G 6 HOH A 64 1164 6 HOH HOH . G 6 HOH A 65 1165 95 HOH HOH . G 6 HOH A 66 1166 44 HOH HOH . G 6 HOH A 67 1167 58 HOH HOH . G 6 HOH A 68 1168 60 HOH HOH . G 6 HOH A 69 1169 178 HOH HOH . G 6 HOH A 70 1170 37 HOH HOH . G 6 HOH A 71 1171 10 HOH HOH . G 6 HOH A 72 1172 81 HOH HOH . G 6 HOH A 73 1173 61 HOH HOH . G 6 HOH A 74 1174 169 HOH HOH . G 6 HOH A 75 1175 132 HOH HOH . G 6 HOH A 76 1176 120 HOH HOH . G 6 HOH A 77 1177 18 HOH HOH . G 6 HOH A 78 1178 1 HOH HOH . G 6 HOH A 79 1179 179 HOH HOH . G 6 HOH A 80 1180 102 HOH HOH . G 6 HOH A 81 1181 25 HOH HOH . G 6 HOH A 82 1182 16 HOH HOH . G 6 HOH A 83 1183 27 HOH HOH . G 6 HOH A 84 1184 57 HOH HOH . G 6 HOH A 85 1185 20 HOH HOH . G 6 HOH A 86 1186 13 HOH HOH . G 6 HOH A 87 1187 171 HOH HOH . G 6 HOH A 88 1188 87 HOH HOH . G 6 HOH A 89 1189 12 HOH HOH . G 6 HOH A 90 1190 77 HOH HOH . G 6 HOH A 91 1191 41 HOH HOH . G 6 HOH A 92 1192 154 HOH HOH . G 6 HOH A 93 1193 91 HOH HOH . G 6 HOH A 94 1194 21 HOH HOH . G 6 HOH A 95 1195 7 HOH HOH . G 6 HOH A 96 1196 117 HOH HOH . G 6 HOH A 97 1197 86 HOH HOH . G 6 HOH A 98 1198 106 HOH HOH . G 6 HOH A 99 1199 2 HOH HOH . G 6 HOH A 100 1200 34 HOH HOH . G 6 HOH A 101 1201 47 HOH HOH . G 6 HOH A 102 1202 22 HOH HOH . G 6 HOH A 103 1203 67 HOH HOH . G 6 HOH A 104 1204 3 HOH HOH . G 6 HOH A 105 1205 158 HOH HOH . G 6 HOH A 106 1206 38 HOH HOH . G 6 HOH A 107 1207 74 HOH HOH . G 6 HOH A 108 1208 113 HOH HOH . G 6 HOH A 109 1209 97 HOH HOH . G 6 HOH A 110 1210 73 HOH HOH . G 6 HOH A 111 1211 40 HOH HOH . G 6 HOH A 112 1212 59 HOH HOH . G 6 HOH A 113 1213 157 HOH HOH . G 6 HOH A 114 1214 78 HOH HOH . G 6 HOH A 115 1215 165 HOH HOH . G 6 HOH A 116 1216 85 HOH HOH . G 6 HOH A 117 1217 9 HOH HOH . G 6 HOH A 118 1218 124 HOH HOH . G 6 HOH A 119 1219 82 HOH HOH . G 6 HOH A 120 1220 168 HOH HOH . G 6 HOH A 121 1221 31 HOH HOH . G 6 HOH A 122 1222 66 HOH HOH . G 6 HOH A 123 1223 181 HOH HOH . G 6 HOH A 124 1224 101 HOH HOH . G 6 HOH A 125 1225 152 HOH HOH . G 6 HOH A 126 1226 108 HOH HOH . G 6 HOH A 127 1227 137 HOH HOH . G 6 HOH A 128 1228 51 HOH HOH . G 6 HOH A 129 1229 69 HOH HOH . G 6 HOH A 130 1230 139 HOH HOH . G 6 HOH A 131 1231 134 HOH HOH . G 6 HOH A 132 1232 205 HOH HOH . G 6 HOH A 133 1233 107 HOH HOH . G 6 HOH A 134 1234 197 HOH HOH . G 6 HOH A 135 1235 125 HOH HOH . G 6 HOH A 136 1236 48 HOH HOH . G 6 HOH A 137 1237 50 HOH HOH . G 6 HOH A 138 1238 112 HOH HOH . G 6 HOH A 139 1239 118 HOH HOH . G 6 HOH A 140 1240 190 HOH HOH . G 6 HOH A 141 1241 128 HOH HOH . G 6 HOH A 142 1242 96 HOH HOH . G 6 HOH A 143 1243 133 HOH HOH . G 6 HOH A 144 1244 84 HOH HOH . G 6 HOH A 145 1245 116 HOH HOH . G 6 HOH A 146 1246 90 HOH HOH . G 6 HOH A 147 1247 53 HOH HOH . G 6 HOH A 148 1248 182 HOH HOH . G 6 HOH A 149 1249 42 HOH HOH . G 6 HOH A 150 1250 146 HOH HOH . G 6 HOH A 151 1251 194 HOH HOH . G 6 HOH A 152 1252 156 HOH HOH . G 6 HOH A 153 1253 177 HOH HOH . G 6 HOH A 154 1254 204 HOH HOH . G 6 HOH A 155 1255 93 HOH HOH . G 6 HOH A 156 1256 71 HOH HOH . G 6 HOH A 157 1257 23 HOH HOH . G 6 HOH A 158 1258 123 HOH HOH . G 6 HOH A 159 1259 184 HOH HOH . G 6 HOH A 160 1260 176 HOH HOH . G 6 HOH A 161 1261 46 HOH HOH . G 6 HOH A 162 1262 63 HOH HOH . G 6 HOH A 163 1263 149 HOH HOH . G 6 HOH A 164 1264 140 HOH HOH . G 6 HOH A 165 1265 145 HOH HOH . G 6 HOH A 166 1266 175 HOH HOH . G 6 HOH A 167 1267 203 HOH HOH . G 6 HOH A 168 1268 195 HOH HOH . G 6 HOH A 169 1269 36 HOH HOH . G 6 HOH A 170 1270 170 HOH HOH . G 6 HOH A 171 1271 75 HOH HOH . G 6 HOH A 172 1272 129 HOH HOH . G 6 HOH A 173 1273 110 HOH HOH . G 6 HOH A 174 1274 193 HOH HOH . G 6 HOH A 175 1275 136 HOH HOH . G 6 HOH A 176 1276 192 HOH HOH . G 6 HOH A 177 1277 180 HOH HOH . G 6 HOH A 178 1278 167 HOH HOH . G 6 HOH A 179 1279 159 HOH HOH . G 6 HOH A 180 1280 138 HOH HOH . G 6 HOH A 181 1281 191 HOH HOH . G 6 HOH A 182 1282 202 HOH HOH . G 6 HOH A 183 1283 211 HOH HOH . G 6 HOH A 184 1284 147 HOH HOH . G 6 HOH A 185 1285 150 HOH HOH . G 6 HOH A 186 1286 151 HOH HOH . G 6 HOH A 187 1287 200 HOH HOH . G 6 HOH A 188 1288 208 HOH HOH . G 6 HOH A 189 1289 114 HOH HOH . G 6 HOH A 190 1290 199 HOH HOH . G 6 HOH A 191 1291 143 HOH HOH . G 6 HOH A 192 1292 163 HOH HOH . G 6 HOH A 193 1293 99 HOH HOH . G 6 HOH A 194 1294 127 HOH HOH . G 6 HOH A 195 1295 119 HOH HOH . G 6 HOH A 196 1296 103 HOH HOH . G 6 HOH A 197 1297 183 HOH HOH . G 6 HOH A 198 1298 80 HOH HOH . G 6 HOH A 199 1299 141 HOH HOH . G 6 HOH A 200 1300 188 HOH HOH . G 6 HOH A 201 1301 206 HOH HOH . G 6 HOH A 202 1302 198 HOH HOH . G 6 HOH A 203 1303 111 HOH HOH . G 6 HOH A 204 1304 142 HOH HOH . G 6 HOH A 205 1305 209 HOH HOH . G 6 HOH A 206 1306 207 HOH HOH . G 6 HOH A 207 1307 100 HOH HOH . G 6 HOH A 208 1308 126 HOH HOH . G 6 HOH A 209 1309 104 HOH HOH . G 6 HOH A 210 1310 210 HOH HOH . G 6 HOH A 211 1311 115 HOH HOH . G 6 HOH A 212 1312 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 -7.776 7.049 -23.426 1 23.41 ? P PO4 1002 A 1 HETATM 2 O O1 PO4 . . . C 3 -8.144 6.567 -24.822 1 23.49 ? O1 PO4 1002 A 1 HETATM 3 O O2 PO4 . . . C 3 -6.661 8.057 -23.566 1 26.38 ? O2 PO4 1002 A 1 HETATM 4 O O3 PO4 . . . C 3 -7.279 5.926 -22.577 1 22.38 ? O3 PO4 1002 A 1 HETATM 5 O O4 PO4 . . . C 3 -8.977 7.695 -22.793 1 25.94 ? O4 PO4 1002 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #