data_6QCF
#
_model_server_result.job_id            OXvragZyAJh4K7BQWJRD8g 
_model_server_result.datetime_utc      '2025-03-06 10:03:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6qcf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"FB","auth_seq_id":201}' 
#
_entry.id    6QCF 
#
_exptl.entry_id    6QCF 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              568.704 
_entity.id                          50 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    45-meric 
_pdbx_struct_assembly.oligomeric_count      45 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 50 EB N N 
? 50 FB N N 
#
_chem_comp.formula           'C25 H49 N2 O8 P S' 
_chem_comp.formula_weight    568.704 
_chem_comp.id                ZMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C25 C24 ZMP sing 526 n n 
O7 P1 ZMP sing 527 n n 
C23 C24 ZMP sing 528 n n 
C23 C22 ZMP sing 529 n n 
P1 O6 ZMP doub 530 n n 
P1 O5 ZMP sing 531 n n 
C1 C22 ZMP sing 532 n n 
C1 C2 ZMP sing 533 n n 
C20 C18 ZMP sing 534 n n 
C19 C18 ZMP sing 535 n n 
O5 C21 ZMP sing 536 n n 
C21 C18 ZMP sing 537 n n 
C2 C3 ZMP sing 538 n n 
C3 C4 ZMP sing 539 n n 
C18 C17 ZMP sing 540 n n 
C4 C5 ZMP sing 541 n n 
O1 C10 ZMP doub 542 n n 
C9 C8 ZMP sing 543 n n 
C9 C10 ZMP sing 544 n n 
C6 C5 ZMP sing 545 n n 
C6 C7 ZMP sing 546 n n 
C8 C7 ZMP sing 547 n n 
C17 C16 ZMP sing 548 n n 
C17 O4 ZMP sing 549 n n 
C10 S1 ZMP sing 550 n n 
O3 C16 ZMP doub 551 n n 
C16 N2 ZMP sing 552 n n 
C12 N1 ZMP sing 553 n n 
C12 C11 ZMP sing 554 n n 
N1 C13 ZMP sing 555 n n 
C13 O2 ZMP doub 556 n n 
C13 C14 ZMP sing 557 n n 
C14 C15 ZMP sing 558 n n 
N2 C15 ZMP sing 559 n n 
S1 C11 ZMP sing 560 n n 
O7 H1 ZMP sing 561 n n 
C21 H3 ZMP sing 562 n n 
C21 H4 ZMP sing 563 n n 
C19 H5 ZMP sing 564 n n 
C19 H6 ZMP sing 565 n n 
C19 H7 ZMP sing 566 n n 
C20 H8 ZMP sing 567 n n 
C20 H9 ZMP sing 568 n n 
C20 H10 ZMP sing 569 n n 
C17 H11 ZMP sing 570 n n 
O4 H12 ZMP sing 571 n n 
N2 H13 ZMP sing 572 n n 
C15 H14 ZMP sing 573 n n 
C15 H15 ZMP sing 574 n n 
C14 H16 ZMP sing 575 n n 
C14 H17 ZMP sing 576 n n 
N1 H18 ZMP sing 577 n n 
C12 H19 ZMP sing 578 n n 
C12 H20 ZMP sing 579 n n 
C11 H21 ZMP sing 580 n n 
C11 H22 ZMP sing 581 n n 
C9 H23 ZMP sing 582 n n 
C9 H24 ZMP sing 583 n n 
C8 H25 ZMP sing 584 n n 
C8 H26 ZMP sing 585 n n 
C7 H27 ZMP sing 586 n n 
C7 H28 ZMP sing 587 n n 
C6 H29 ZMP sing 588 n n 
C6 H30 ZMP sing 589 n n 
C5 H31 ZMP sing 590 n n 
C5 H32 ZMP sing 591 n n 
C4 H33 ZMP sing 592 n n 
C4 H34 ZMP sing 593 n n 
C3 H35 ZMP sing 594 n n 
C3 H36 ZMP sing 595 n n 
C2 H37 ZMP sing 596 n n 
C2 H38 ZMP sing 597 n n 
C1 H39 ZMP sing 598 n n 
C1 H40 ZMP sing 599 n n 
C22 H41 ZMP sing 600 n n 
C22 H42 ZMP sing 601 n n 
C23 H43 ZMP sing 602 n n 
C23 H44 ZMP sing 603 n n 
C24 H45 ZMP sing 604 n n 
C24 H46 ZMP sing 605 n n 
C25 H47 ZMP sing 606 n n 
C25 H48 ZMP sing 607 n n 
C25 H49 ZMP sing 608 n n 
P1 O8 ZMP sing 609 n n 
O8 H2 ZMP sing 610 n n 
#
_atom_sites.entry_id                     6QCF 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
TA 45 SF4 V1 1 500 500 SF4 SF4 . 
UA 46 FMN V1 1 501 501 FMN FMN . 
VA 47 FES V2 1 300 300 FES FES . 
WA 45 SF4 S1 1 801 801 SF4 SF4 . 
XA 45 SF4 S1 1 802 802 SF4 SF4 . 
YA 47 FES S1 1 803 803 FES FES . 
ZA 45 SF4 S7 1 300 300 SF4 SF4 . 
AB 45 SF4 S8 1 201 502 SF4 SF4 . 
BB 45 SF4 S8 1 202 503 SF4 SF4 . 
CB 48 ZN S6 1 300 300 ZN ZN . 
DB 49 NDP A9 1 401 401 NDP NDP . 
EB 50 ZMP A6 1 201 101 ZMP ZMP . 
FB 50 ZMP B9 1 201 101 ZMP ZMP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O7 ZMP . . . FB 50 437.072 355.318 384.058 1 110 ? O7 ZMP 201 B9 1 
HETATM 2 P P1 ZMP . . . FB 50 436.992 354.886 382.513 1 110 ? P1 ZMP 201 B9 1 
HETATM 3 O O6 ZMP . . . FB 50 438.326 354.446 382.055 1 110 ? O6 ZMP 201 B9 1 
HETATM 4 O O5 ZMP . . . FB 50 436.625 356.282 381.79 1 110 ? O5 ZMP 201 B9 1 
HETATM 5 C C21 ZMP . . . FB 50 436.305 356.305 380.395 1 110 ? C21 ZMP 201 B9 1 
HETATM 6 C C18 ZMP . . . FB 50 436.29 357.742 379.886 1 110 ? C18 ZMP 201 B9 1 
HETATM 7 C C19 ZMP . . . FB 50 434.966 358.394 380.276 1 110 ? C19 ZMP 201 B9 1 
HETATM 8 C C20 ZMP . . . FB 50 437.463 358.468 380.541 1 110 ? C20 ZMP 201 B9 1 
HETATM 9 C C17 ZMP . . . FB 50 436.443 357.689 378.356 1 110 ? C17 ZMP 201 B9 1 
HETATM 10 O O4 ZMP . . . FB 50 437.782 357.31 378.05 1 110 ? O4 ZMP 201 B9 1 
HETATM 11 C C16 ZMP . . . FB 50 436.108 358.985 377.588 1 110 ? C16 ZMP 201 B9 1 
HETATM 12 O O3 ZMP . . . FB 50 436.511 360.097 377.929 1 110 ? O3 ZMP 201 B9 1 
HETATM 13 N N2 ZMP . . . FB 50 435.4 358.784 376.472 1 110 ? N2 ZMP 201 B9 1 
HETATM 14 C C15 ZMP . . . FB 50 434.999 359.892 375.589 1 110 ? C15 ZMP 201 B9 1 
HETATM 15 C C14 ZMP . . . FB 50 434.805 359.356 374.171 1 110 ? C14 ZMP 201 B9 1 
HETATM 16 C C13 ZMP . . . FB 50 436.058 358.571 373.78 1 110 ? C13 ZMP 201 B9 1 
HETATM 17 O O2 ZMP . . . FB 50 436.938 358.359 374.608 1 110 ? O2 ZMP 201 B9 1 
HETATM 18 N N1 ZMP . . . FB 50 436.141 358.148 372.512 1 110 ? N1 ZMP 201 B9 1 
HETATM 19 C C12 ZMP . . . FB 50 435.129 358.365 371.471 1 110 ? C12 ZMP 201 B9 1 
HETATM 20 C C11 ZMP . . . FB 50 435.518 357.496 370.275 1 110 ? C11 ZMP 201 B9 1 
HETATM 21 S S1 ZMP . . . FB 50 436.841 356.313 370.72 1 110 ? S1 ZMP 201 B9 1 
HETATM 22 C C10 ZMP . . . FB 50 438.011 356.431 369.364 1 110 ? C10 ZMP 201 B9 1 
HETATM 23 O O1 ZMP . . . FB 50 439.164 356.84 369.478 1 110 ? O1 ZMP 201 B9 1 
HETATM 24 C C9 ZMP . . . FB 50 437.509 355.927 368.012 1 110 ? C9 ZMP 201 B9 1 
HETATM 25 C C8 ZMP . . . FB 50 438.519 354.928 367.451 1 110 ? C8 ZMP 201 B9 1 
HETATM 26 C C7 ZMP . . . FB 50 437.843 354.012 366.426 1 110 ? C7 ZMP 201 B9 1 
HETATM 27 C C6 ZMP . . . FB 50 437.449 352.671 367.061 1 110 ? C6 ZMP 201 B9 1 
HETATM 28 C C5 ZMP . . . FB 50 438.353 351.562 366.515 1 110 ? C5 ZMP 201 B9 1 
HETATM 29 C C4 ZMP . . . FB 50 437.657 350.205 366.623 1 110 ? C4 ZMP 201 B9 1 
HETATM 30 C C3 ZMP . . . FB 50 437.536 349.588 365.231 1 110 ? C3 ZMP 201 B9 1 
HETATM 31 C C2 ZMP . . . FB 50 437.357 348.075 365.346 1 110 ? C2 ZMP 201 B9 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    72 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           31 
#