data_6QDG # _model_server_result.job_id 9hAulG08_p3iZqmeFXP78A _model_server_result.datetime_utc '2024-11-01 20:35:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qdg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 6QDG # _exptl.entry_id 6QDG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.96 _cell.angle_gamma 90 _cell.entry_id 6QDG _cell.length_a 48.598 _cell.length_b 91.202 _cell.length_c 53.344 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QDG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 175 A LEU 175 1_555 C MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc2 B O1A MYA . A MYA 1001 1_555 C MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.845 ? metalc ? metalc3 B O5A MYA . A MYA 1001 1_555 C MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.863 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6QDG _atom_sites.fract_transf_matrix[1][1] 0.020577 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009146 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010965 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020515 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MYA A 1 1001 1001 MYA MYA . C 3 MG A 1 1002 1 MG MG . D 4 HXN A 1 1003 1 HXN 247 . E 5 HOH A 1 1101 61 HOH HOH . E 5 HOH A 2 1102 249 HOH HOH . E 5 HOH A 3 1103 29 HOH HOH . E 5 HOH A 4 1104 122 HOH HOH . E 5 HOH A 5 1105 220 HOH HOH . E 5 HOH A 6 1106 95 HOH HOH . E 5 HOH A 7 1107 56 HOH HOH . E 5 HOH A 8 1108 150 HOH HOH . E 5 HOH A 9 1109 119 HOH HOH . E 5 HOH A 10 1110 200 HOH HOH . E 5 HOH A 11 1111 151 HOH HOH . E 5 HOH A 12 1112 76 HOH HOH . E 5 HOH A 13 1113 198 HOH HOH . E 5 HOH A 14 1114 103 HOH HOH . E 5 HOH A 15 1115 210 HOH HOH . E 5 HOH A 16 1116 192 HOH HOH . E 5 HOH A 17 1117 233 HOH HOH . E 5 HOH A 18 1118 126 HOH HOH . E 5 HOH A 19 1119 65 HOH HOH . E 5 HOH A 20 1120 129 HOH HOH . E 5 HOH A 21 1121 14 HOH HOH . E 5 HOH A 22 1122 54 HOH HOH . E 5 HOH A 23 1123 114 HOH HOH . E 5 HOH A 24 1124 141 HOH HOH . E 5 HOH A 25 1125 168 HOH HOH . E 5 HOH A 26 1126 87 HOH HOH . E 5 HOH A 27 1127 38 HOH HOH . E 5 HOH A 28 1128 74 HOH HOH . E 5 HOH A 29 1129 148 HOH HOH . E 5 HOH A 30 1130 77 HOH HOH . E 5 HOH A 31 1131 288 HOH HOH . E 5 HOH A 32 1132 208 HOH HOH . E 5 HOH A 33 1133 177 HOH HOH . E 5 HOH A 34 1134 253 HOH HOH . E 5 HOH A 35 1135 24 HOH HOH . E 5 HOH A 36 1136 277 HOH HOH . E 5 HOH A 37 1137 155 HOH HOH . E 5 HOH A 38 1138 118 HOH HOH . E 5 HOH A 39 1139 251 HOH HOH . E 5 HOH A 40 1140 224 HOH HOH . E 5 HOH A 41 1141 250 HOH HOH . E 5 HOH A 42 1142 145 HOH HOH . E 5 HOH A 43 1143 161 HOH HOH . E 5 HOH A 44 1144 260 HOH HOH . E 5 HOH A 45 1145 193 HOH HOH . E 5 HOH A 46 1146 197 HOH HOH . E 5 HOH A 47 1147 276 HOH HOH . E 5 HOH A 48 1148 167 HOH HOH . E 5 HOH A 49 1149 290 HOH HOH . E 5 HOH A 50 1150 21 HOH HOH . E 5 HOH A 51 1151 11 HOH HOH . E 5 HOH A 52 1152 211 HOH HOH . E 5 HOH A 53 1153 183 HOH HOH . E 5 HOH A 54 1154 184 HOH HOH . E 5 HOH A 55 1155 116 HOH HOH . E 5 HOH A 56 1156 40 HOH HOH . E 5 HOH A 57 1157 123 HOH HOH . E 5 HOH A 58 1158 33 HOH HOH . E 5 HOH A 59 1159 5 HOH HOH . E 5 HOH A 60 1160 6 HOH HOH . E 5 HOH A 61 1161 160 HOH HOH . E 5 HOH A 62 1162 72 HOH HOH . E 5 HOH A 63 1163 34 HOH HOH . E 5 HOH A 64 1164 239 HOH HOH . E 5 HOH A 65 1165 60 HOH HOH . E 5 HOH A 66 1166 272 HOH HOH . E 5 HOH A 67 1167 80 HOH HOH . E 5 HOH A 68 1168 44 HOH HOH . E 5 HOH A 69 1169 227 HOH HOH . E 5 HOH A 70 1170 152 HOH HOH . E 5 HOH A 71 1171 105 HOH HOH . E 5 HOH A 72 1172 35 HOH HOH . E 5 HOH A 73 1173 173 HOH HOH . E 5 HOH A 74 1174 209 HOH HOH . E 5 HOH A 75 1175 206 HOH HOH . E 5 HOH A 76 1176 81 HOH HOH . E 5 HOH A 77 1177 136 HOH HOH . E 5 HOH A 78 1178 31 HOH HOH . E 5 HOH A 79 1179 4 HOH HOH . E 5 HOH A 80 1180 91 HOH HOH . E 5 HOH A 81 1181 48 HOH HOH . E 5 HOH A 82 1182 8 HOH HOH . E 5 HOH A 83 1183 47 HOH HOH . E 5 HOH A 84 1184 244 HOH HOH . E 5 HOH A 85 1185 90 HOH HOH . E 5 HOH A 86 1186 32 HOH HOH . E 5 HOH A 87 1187 49 HOH HOH . E 5 HOH A 88 1188 270 HOH HOH . E 5 HOH A 89 1189 297 HOH HOH . E 5 HOH A 90 1190 162 HOH HOH . E 5 HOH A 91 1191 219 HOH HOH . E 5 HOH A 92 1192 280 HOH HOH . E 5 HOH A 93 1193 269 HOH HOH . E 5 HOH A 94 1194 213 HOH HOH . E 5 HOH A 95 1195 50 HOH HOH . E 5 HOH A 96 1196 169 HOH HOH . E 5 HOH A 97 1197 175 HOH HOH . E 5 HOH A 98 1198 28 HOH HOH . E 5 HOH A 99 1199 278 HOH HOH . E 5 HOH A 100 1200 27 HOH HOH . E 5 HOH A 101 1201 282 HOH HOH . E 5 HOH A 102 1202 130 HOH HOH . E 5 HOH A 103 1203 93 HOH HOH . E 5 HOH A 104 1204 2 HOH HOH . E 5 HOH A 105 1205 64 HOH HOH . E 5 HOH A 106 1206 265 HOH HOH . E 5 HOH A 107 1207 20 HOH HOH . E 5 HOH A 108 1208 285 HOH HOH . E 5 HOH A 109 1209 196 HOH HOH . E 5 HOH A 110 1210 170 HOH HOH . E 5 HOH A 111 1211 3 HOH HOH . E 5 HOH A 112 1212 83 HOH HOH . E 5 HOH A 113 1213 58 HOH HOH . E 5 HOH A 114 1214 10 HOH HOH . E 5 HOH A 115 1215 137 HOH HOH . E 5 HOH A 116 1216 187 HOH HOH . E 5 HOH A 117 1217 75 HOH HOH . E 5 HOH A 118 1218 264 HOH HOH . E 5 HOH A 119 1219 143 HOH HOH . E 5 HOH A 120 1220 254 HOH HOH . E 5 HOH A 121 1221 246 HOH HOH . E 5 HOH A 122 1222 69 HOH HOH . E 5 HOH A 123 1223 62 HOH HOH . E 5 HOH A 124 1224 67 HOH HOH . E 5 HOH A 125 1225 43 HOH HOH . E 5 HOH A 126 1226 140 HOH HOH . E 5 HOH A 127 1227 204 HOH HOH . E 5 HOH A 128 1228 63 HOH HOH . E 5 HOH A 129 1229 281 HOH HOH . E 5 HOH A 130 1230 106 HOH HOH . E 5 HOH A 131 1231 30 HOH HOH . E 5 HOH A 132 1232 19 HOH HOH . E 5 HOH A 133 1233 42 HOH HOH . E 5 HOH A 134 1234 107 HOH HOH . E 5 HOH A 135 1235 274 HOH HOH . E 5 HOH A 136 1236 70 HOH HOH . E 5 HOH A 137 1237 231 HOH HOH . E 5 HOH A 138 1238 149 HOH HOH . E 5 HOH A 139 1239 25 HOH HOH . E 5 HOH A 140 1240 85 HOH HOH . E 5 HOH A 141 1241 55 HOH HOH . E 5 HOH A 142 1242 86 HOH HOH . E 5 HOH A 143 1243 113 HOH HOH . E 5 HOH A 144 1244 22 HOH HOH . E 5 HOH A 145 1245 97 HOH HOH . E 5 HOH A 146 1246 36 HOH HOH . E 5 HOH A 147 1247 154 HOH HOH . E 5 HOH A 148 1248 240 HOH HOH . E 5 HOH A 149 1249 230 HOH HOH . E 5 HOH A 150 1250 12 HOH HOH . E 5 HOH A 151 1251 26 HOH HOH . E 5 HOH A 152 1252 53 HOH HOH . E 5 HOH A 153 1253 1 HOH HOH . E 5 HOH A 154 1254 273 HOH HOH . E 5 HOH A 155 1255 51 HOH HOH . E 5 HOH A 156 1256 195 HOH HOH . E 5 HOH A 157 1257 71 HOH HOH . E 5 HOH A 158 1258 13 HOH HOH . E 5 HOH A 159 1259 18 HOH HOH . E 5 HOH A 160 1260 205 HOH HOH . E 5 HOH A 161 1261 235 HOH HOH . E 5 HOH A 162 1262 289 HOH HOH . E 5 HOH A 163 1263 298 HOH HOH . E 5 HOH A 164 1264 201 HOH HOH . E 5 HOH A 165 1265 96 HOH HOH . E 5 HOH A 166 1266 117 HOH HOH . E 5 HOH A 167 1267 291 HOH HOH . E 5 HOH A 168 1268 94 HOH HOH . E 5 HOH A 169 1269 23 HOH HOH . E 5 HOH A 170 1270 110 HOH HOH . E 5 HOH A 171 1271 284 HOH HOH . E 5 HOH A 172 1272 237 HOH HOH . E 5 HOH A 173 1273 7 HOH HOH . E 5 HOH A 174 1274 78 HOH HOH . E 5 HOH A 175 1275 109 HOH HOH . E 5 HOH A 176 1276 99 HOH HOH . E 5 HOH A 177 1277 242 HOH HOH . E 5 HOH A 178 1278 39 HOH HOH . E 5 HOH A 179 1279 267 HOH HOH . E 5 HOH A 180 1280 234 HOH HOH . E 5 HOH A 181 1281 9 HOH HOH . E 5 HOH A 182 1282 275 HOH HOH . E 5 HOH A 183 1283 182 HOH HOH . E 5 HOH A 184 1284 188 HOH HOH . E 5 HOH A 185 1285 41 HOH HOH . E 5 HOH A 186 1286 268 HOH HOH . E 5 HOH A 187 1287 66 HOH HOH . E 5 HOH A 188 1288 68 HOH HOH . E 5 HOH A 189 1289 164 HOH HOH . E 5 HOH A 190 1290 111 HOH HOH . E 5 HOH A 191 1291 262 HOH HOH . E 5 HOH A 192 1292 194 HOH HOH . E 5 HOH A 193 1293 102 HOH HOH . E 5 HOH A 194 1294 37 HOH HOH . E 5 HOH A 195 1295 248 HOH HOH . E 5 HOH A 196 1296 279 HOH HOH . E 5 HOH A 197 1297 263 HOH HOH . E 5 HOH A 198 1298 135 HOH HOH . E 5 HOH A 199 1299 52 HOH HOH . E 5 HOH A 200 1300 146 HOH HOH . E 5 HOH A 201 1301 243 HOH HOH . E 5 HOH A 202 1302 189 HOH HOH . E 5 HOH A 203 1303 17 HOH HOH . E 5 HOH A 204 1304 92 HOH HOH . E 5 HOH A 205 1305 131 HOH HOH . E 5 HOH A 206 1306 98 HOH HOH . E 5 HOH A 207 1307 287 HOH HOH . E 5 HOH A 208 1308 166 HOH HOH . E 5 HOH A 209 1309 134 HOH HOH . E 5 HOH A 210 1310 120 HOH HOH . E 5 HOH A 211 1311 283 HOH HOH . E 5 HOH A 212 1312 127 HOH HOH . E 5 HOH A 213 1313 142 HOH HOH . E 5 HOH A 214 1314 186 HOH HOH . E 5 HOH A 215 1315 121 HOH HOH . E 5 HOH A 216 1316 57 HOH HOH . E 5 HOH A 217 1317 16 HOH HOH . E 5 HOH A 218 1318 139 HOH HOH . E 5 HOH A 219 1319 214 HOH HOH . E 5 HOH A 220 1320 232 HOH HOH . E 5 HOH A 221 1321 216 HOH HOH . E 5 HOH A 222 1322 104 HOH HOH . E 5 HOH A 223 1323 15 HOH HOH . E 5 HOH A 224 1324 88 HOH HOH . E 5 HOH A 225 1325 256 HOH HOH . E 5 HOH A 226 1326 132 HOH HOH . E 5 HOH A 227 1327 178 HOH HOH . E 5 HOH A 228 1328 181 HOH HOH . E 5 HOH A 229 1329 295 HOH HOH . E 5 HOH A 230 1330 89 HOH HOH . E 5 HOH A 231 1331 101 HOH HOH . E 5 HOH A 232 1332 73 HOH HOH . E 5 HOH A 233 1333 190 HOH HOH . E 5 HOH A 234 1334 171 HOH HOH . E 5 HOH A 235 1335 128 HOH HOH . E 5 HOH A 236 1336 241 HOH HOH . E 5 HOH A 237 1337 176 HOH HOH . E 5 HOH A 238 1338 84 HOH HOH . E 5 HOH A 239 1339 59 HOH HOH . E 5 HOH A 240 1340 185 HOH HOH . E 5 HOH A 241 1341 174 HOH HOH . E 5 HOH A 242 1342 157 HOH HOH . E 5 HOH A 243 1343 163 HOH HOH . E 5 HOH A 244 1344 245 HOH HOH . E 5 HOH A 245 1345 257 HOH HOH . E 5 HOH A 246 1346 180 HOH HOH . E 5 HOH A 247 1347 125 HOH HOH . E 5 HOH A 248 1348 100 HOH HOH . E 5 HOH A 249 1349 191 HOH HOH . E 5 HOH A 250 1350 247 HOH HOH . E 5 HOH A 251 1351 218 HOH HOH . E 5 HOH A 252 1352 46 HOH HOH . E 5 HOH A 253 1353 147 HOH HOH . E 5 HOH A 254 1354 156 HOH HOH . E 5 HOH A 255 1355 215 HOH HOH . E 5 HOH A 256 1356 292 HOH HOH . E 5 HOH A 257 1357 271 HOH HOH . E 5 HOH A 258 1358 158 HOH HOH . E 5 HOH A 259 1359 222 HOH HOH . E 5 HOH A 260 1360 221 HOH HOH . E 5 HOH A 261 1361 203 HOH HOH . E 5 HOH A 262 1362 133 HOH HOH . E 5 HOH A 263 1363 172 HOH HOH . E 5 HOH A 264 1364 229 HOH HOH . E 5 HOH A 265 1365 223 HOH HOH . E 5 HOH A 266 1366 255 HOH HOH . E 5 HOH A 267 1367 266 HOH HOH . E 5 HOH A 268 1368 115 HOH HOH . E 5 HOH A 269 1369 252 HOH HOH . E 5 HOH A 270 1370 124 HOH HOH . E 5 HOH A 271 1371 259 HOH HOH . E 5 HOH A 272 1372 258 HOH HOH . E 5 HOH A 273 1373 45 HOH HOH . E 5 HOH A 274 1374 108 HOH HOH . E 5 HOH A 275 1375 238 HOH HOH . E 5 HOH A 276 1376 79 HOH HOH . E 5 HOH A 277 1377 199 HOH HOH . E 5 HOH A 278 1378 293 HOH HOH . E 5 HOH A 279 1379 294 HOH HOH . E 5 HOH A 280 1380 286 HOH HOH . E 5 HOH A 281 1381 212 HOH HOH . E 5 HOH A 282 1382 296 HOH HOH . E 5 HOH A 283 1383 261 HOH HOH . E 5 HOH A 284 1384 225 HOH HOH . E 5 HOH A 285 1385 144 HOH HOH . E 5 HOH A 286 1386 202 HOH HOH . E 5 HOH A 287 1387 165 HOH HOH . E 5 HOH A 288 1388 179 HOH HOH . E 5 HOH A 289 1389 153 HOH HOH . E 5 HOH A 290 1390 82 HOH HOH . E 5 HOH A 291 1391 138 HOH HOH . E 5 HOH A 292 1392 226 HOH HOH . E 5 HOH A 293 1393 207 HOH HOH . E 5 HOH A 294 1394 112 HOH HOH . E 5 HOH A 295 1395 217 HOH HOH . E 5 HOH A 296 1396 236 HOH HOH . E 5 HOH A 297 1397 159 HOH HOH . E 5 HOH A 298 1398 228 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 13.427 _atom_site.Cartn_y 30.485 _atom_site.Cartn_z 59.1 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #