data_6QDZ # _model_server_result.job_id c0e-d7UH7pfL58FhhFkPOg _model_server_result.datetime_utc '2024-10-11 01:22:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qdz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6QDZ # _exptl.entry_id 6QDZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 577.719 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[5-~{tert}-butyl-2-(4-methylphenyl)pyrazol-3-yl]-3-[(1~{S},4~{S})-4-[(3-propan-2-yl-[1,2,4]triazolo[4,3-a]pyridin-6-yl)oxy]-1,2,3,4-tetrahydronaphthalen-1-yl]urea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QDZ _cell.length_a 65.351 _cell.length_b 73.99 _cell.length_c 77.671 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QDZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C34 H39 N7 O2' _chem_comp.formula_weight 577.719 _chem_comp.id HYK _chem_comp.mon_nstd_flag . _chem_comp.name 1-[5-~{tert}-butyl-2-(4-methylphenyl)pyrazol-3-yl]-3-[(1~{S},4~{S})-4-[(3-propan-2-yl-[1,2,4]triazolo[4,3-a]pyridin-6-yl)oxy]-1,2,3,4-tetrahydronaphthalen-1-yl]urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C10 HYK sing 152 n n C11 C10 HYK sing 153 n n C7 C8 HYK doub 154 n y C7 C6 HYK sing 155 n y C8 C3 HYK sing 156 n y C10 C2 HYK sing 157 n n C10 C12 HYK sing 158 n n N C2 HYK doub 159 n y N N1 HYK sing 160 n y C2 C1 HYK sing 161 n y C9 C6 HYK sing 162 n n C6 C5 HYK doub 163 n y C3 N1 HYK sing 164 n n C3 C4 HYK doub 165 n y N1 C HYK sing 166 n y C1 C HYK doub 167 n y C N2 HYK sing 168 n n C5 C4 HYK sing 169 n y N2 C14 HYK sing 170 n n C14 O1 HYK doub 171 n n C14 N3 HYK sing 172 n n N3 C15 HYK sing 173 n n C21 C22 HYK doub 174 n y C21 C20 HYK sing 175 n y C22 C23 HYK sing 176 n y C15 C20 HYK sing 177 n n C15 C16 HYK sing 178 n n C20 C19 HYK doub 179 n y C23 C24 HYK doub 180 n y C16 C17 HYK sing 181 n n C19 C24 HYK sing 182 n y C19 C18 HYK sing 183 n n C17 C18 HYK sing 184 n n C18 O HYK sing 185 n n C33 C32 HYK doub 186 n y C33 C25 HYK sing 187 n y C32 C27 HYK sing 188 n y O C25 HYK sing 189 n n C25 C26 HYK doub 190 n y C27 N5 HYK doub 191 n y C27 N4 HYK sing 192 n y N5 N6 HYK sing 193 n y C26 N4 HYK sing 194 n y N4 C28 HYK sing 195 n y N6 C28 HYK doub 196 n y C28 C29 HYK sing 197 n n C31 C29 HYK sing 198 n n C29 C30 HYK sing 199 n n N3 H1 HYK sing 200 n n C4 H2 HYK sing 201 n n C5 H3 HYK sing 202 n n C7 H4 HYK sing 203 n n C8 H5 HYK sing 204 n n C13 H6 HYK sing 205 n n C13 H7 HYK sing 206 n n C13 H8 HYK sing 207 n n C15 H9 HYK sing 208 n n C17 H10 HYK sing 209 n n C17 H11 HYK sing 210 n n C21 H12 HYK sing 211 n n C22 H13 HYK sing 212 n n C24 H14 HYK sing 213 n n C26 H15 HYK sing 214 n n C9 H16 HYK sing 215 n n C9 H17 HYK sing 216 n n C9 H18 HYK sing 217 n n C12 H19 HYK sing 218 n n C12 H20 HYK sing 219 n n C12 H21 HYK sing 220 n n C11 H22 HYK sing 221 n n C11 H23 HYK sing 222 n n C11 H24 HYK sing 223 n n C1 H25 HYK sing 224 n n N2 H26 HYK sing 225 n n C16 H27 HYK sing 226 n n C16 H28 HYK sing 227 n n C18 H29 HYK sing 228 n n C33 H30 HYK sing 229 n n C32 H31 HYK sing 230 n n C29 H32 HYK sing 231 n n C31 H33 HYK sing 232 n n C31 H34 HYK sing 233 n n C31 H35 HYK sing 234 n n C30 H36 HYK sing 235 n n C30 H37 HYK sing 236 n n C30 H38 HYK sing 237 n n C23 H39 HYK sing 238 n n # _atom_sites.entry_id 6QDZ _atom_sites.fract_transf_matrix[1][1] 0.015302 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013515 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012875 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 I46 A 1 401 1354 I46 I46 . C 3 HYK A 1 402 1 HYK LIG . D 4 HOH A 1 501 122 HOH HOH . D 4 HOH A 2 502 136 HOH HOH . D 4 HOH A 3 503 131 HOH HOH . D 4 HOH A 4 504 138 HOH HOH . D 4 HOH A 5 505 152 HOH HOH . D 4 HOH A 6 506 80 HOH HOH . D 4 HOH A 7 507 139 HOH HOH . D 4 HOH A 8 508 7 HOH HOH . D 4 HOH A 9 509 12 HOH HOH . D 4 HOH A 10 510 66 HOH HOH . D 4 HOH A 11 511 55 HOH HOH . D 4 HOH A 12 512 73 HOH HOH . D 4 HOH A 13 513 123 HOH HOH . D 4 HOH A 14 514 97 HOH HOH . D 4 HOH A 15 515 20 HOH HOH . D 4 HOH A 16 516 78 HOH HOH . D 4 HOH A 17 517 107 HOH HOH . D 4 HOH A 18 518 40 HOH HOH . D 4 HOH A 19 519 38 HOH HOH . D 4 HOH A 20 520 58 HOH HOH . D 4 HOH A 21 521 88 HOH HOH . D 4 HOH A 22 522 18 HOH HOH . D 4 HOH A 23 523 94 HOH HOH . D 4 HOH A 24 524 46 HOH HOH . D 4 HOH A 25 525 49 HOH HOH . D 4 HOH A 26 526 153 HOH HOH . D 4 HOH A 27 527 16 HOH HOH . D 4 HOH A 28 528 53 HOH HOH . D 4 HOH A 29 529 142 HOH HOH . D 4 HOH A 30 530 59 HOH HOH . D 4 HOH A 31 531 118 HOH HOH . D 4 HOH A 32 532 71 HOH HOH . D 4 HOH A 33 533 130 HOH HOH . D 4 HOH A 34 534 114 HOH HOH . D 4 HOH A 35 535 125 HOH HOH . D 4 HOH A 36 536 6 HOH HOH . D 4 HOH A 37 537 70 HOH HOH . D 4 HOH A 38 538 151 HOH HOH . D 4 HOH A 39 539 150 HOH HOH . D 4 HOH A 40 540 42 HOH HOH . D 4 HOH A 41 541 115 HOH HOH . D 4 HOH A 42 542 82 HOH HOH . D 4 HOH A 43 543 113 HOH HOH . D 4 HOH A 44 544 63 HOH HOH . D 4 HOH A 45 545 48 HOH HOH . D 4 HOH A 46 546 116 HOH HOH . D 4 HOH A 47 547 157 HOH HOH . D 4 HOH A 48 548 19 HOH HOH . D 4 HOH A 49 549 17 HOH HOH . D 4 HOH A 50 550 21 HOH HOH . D 4 HOH A 51 551 9 HOH HOH . D 4 HOH A 52 552 68 HOH HOH . D 4 HOH A 53 553 109 HOH HOH . D 4 HOH A 54 554 36 HOH HOH . D 4 HOH A 55 555 5 HOH HOH . D 4 HOH A 56 556 45 HOH HOH . D 4 HOH A 57 557 35 HOH HOH . D 4 HOH A 58 558 101 HOH HOH . D 4 HOH A 59 559 32 HOH HOH . D 4 HOH A 60 560 92 HOH HOH . D 4 HOH A 61 561 57 HOH HOH . D 4 HOH A 62 562 65 HOH HOH . D 4 HOH A 63 563 22 HOH HOH . D 4 HOH A 64 564 76 HOH HOH . D 4 HOH A 65 565 28 HOH HOH . D 4 HOH A 66 566 44 HOH HOH . D 4 HOH A 67 567 52 HOH HOH . D 4 HOH A 68 568 112 HOH HOH . D 4 HOH A 69 569 4 HOH HOH . D 4 HOH A 70 570 87 HOH HOH . D 4 HOH A 71 571 99 HOH HOH . D 4 HOH A 72 572 121 HOH HOH . D 4 HOH A 73 573 37 HOH HOH . D 4 HOH A 74 574 77 HOH HOH . D 4 HOH A 75 575 27 HOH HOH . D 4 HOH A 76 576 69 HOH HOH . D 4 HOH A 77 577 86 HOH HOH . D 4 HOH A 78 578 100 HOH HOH . D 4 HOH A 79 579 15 HOH HOH . D 4 HOH A 80 580 106 HOH HOH . D 4 HOH A 81 581 64 HOH HOH . D 4 HOH A 82 582 3 HOH HOH . D 4 HOH A 83 583 11 HOH HOH . D 4 HOH A 84 584 2 HOH HOH . D 4 HOH A 85 585 10 HOH HOH . D 4 HOH A 86 586 14 HOH HOH . D 4 HOH A 87 587 56 HOH HOH . D 4 HOH A 88 588 54 HOH HOH . D 4 HOH A 89 589 154 HOH HOH . D 4 HOH A 90 590 105 HOH HOH . D 4 HOH A 91 591 41 HOH HOH . D 4 HOH A 92 592 29 HOH HOH . D 4 HOH A 93 593 24 HOH HOH . D 4 HOH A 94 594 8 HOH HOH . D 4 HOH A 95 595 81 HOH HOH . D 4 HOH A 96 596 83 HOH HOH . D 4 HOH A 97 597 67 HOH HOH . D 4 HOH A 98 598 51 HOH HOH . D 4 HOH A 99 599 91 HOH HOH . D 4 HOH A 100 600 84 HOH HOH . D 4 HOH A 101 601 34 HOH HOH . D 4 HOH A 102 602 61 HOH HOH . D 4 HOH A 103 603 110 HOH HOH . D 4 HOH A 104 604 33 HOH HOH . D 4 HOH A 105 605 124 HOH HOH . D 4 HOH A 106 606 31 HOH HOH . D 4 HOH A 107 607 104 HOH HOH . D 4 HOH A 108 608 108 HOH HOH . D 4 HOH A 109 609 25 HOH HOH . D 4 HOH A 110 610 26 HOH HOH . D 4 HOH A 111 611 72 HOH HOH . D 4 HOH A 112 612 141 HOH HOH . D 4 HOH A 113 613 23 HOH HOH . D 4 HOH A 114 614 74 HOH HOH . D 4 HOH A 115 615 60 HOH HOH . D 4 HOH A 116 616 119 HOH HOH . D 4 HOH A 117 617 98 HOH HOH . D 4 HOH A 118 618 90 HOH HOH . D 4 HOH A 119 619 43 HOH HOH . D 4 HOH A 120 620 47 HOH HOH . D 4 HOH A 121 621 39 HOH HOH . D 4 HOH A 122 622 13 HOH HOH . D 4 HOH A 123 623 1 HOH HOH . D 4 HOH A 124 624 62 HOH HOH . D 4 HOH A 125 625 102 HOH HOH . D 4 HOH A 126 626 111 HOH HOH . D 4 HOH A 127 627 155 HOH HOH . D 4 HOH A 128 628 117 HOH HOH . D 4 HOH A 129 629 95 HOH HOH . D 4 HOH A 130 630 103 HOH HOH . D 4 HOH A 131 631 93 HOH HOH . D 4 HOH A 132 632 89 HOH HOH . D 4 HOH A 133 633 30 HOH HOH . D 4 HOH A 134 634 144 HOH HOH . D 4 HOH A 135 635 75 HOH HOH . D 4 HOH A 136 636 156 HOH HOH . D 4 HOH A 137 637 126 HOH HOH . D 4 HOH A 138 638 128 HOH HOH . D 4 HOH A 139 639 96 HOH HOH . D 4 HOH A 140 640 133 HOH HOH . D 4 HOH A 141 641 135 HOH HOH . D 4 HOH A 142 642 129 HOH HOH . D 4 HOH A 143 643 120 HOH HOH . D 4 HOH A 144 644 79 HOH HOH . D 4 HOH A 145 645 140 HOH HOH . D 4 HOH A 146 646 149 HOH HOH . D 4 HOH A 147 647 143 HOH HOH . D 4 HOH A 148 648 85 HOH HOH . D 4 HOH A 149 649 147 HOH HOH . D 4 HOH A 150 650 148 HOH HOH . D 4 HOH A 151 651 132 HOH HOH . D 4 HOH A 152 652 50 HOH HOH . D 4 HOH A 153 653 145 HOH HOH . D 4 HOH A 154 654 137 HOH HOH . D 4 HOH A 155 655 134 HOH HOH . D 4 HOH A 156 656 146 HOH HOH . D 4 HOH A 157 657 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 HYK . . . C 3 -0.894 -4.369 12.636 1 20.47 ? N1 HYK 402 A 1 HETATM 2 N N3 HYK . . . C 3 2.188 -2.557 15.645 1 19.83 ? N3 HYK 402 A 1 HETATM 3 C C4 HYK . . . C 3 0.078 -6.317 13.688 1 19.67 ? C4 HYK 402 A 1 HETATM 4 C C5 HYK . . . C 3 0.61 -7.582 13.585 1 20.35 ? C5 HYK 402 A 1 HETATM 5 C C6 HYK . . . C 3 0.676 -8.236 12.362 1 20.63 ? C6 HYK 402 A 1 HETATM 6 C C7 HYK . . . C 3 0.215 -7.578 11.247 1 19.94 ? C7 HYK 402 A 1 HETATM 7 C C8 HYK . . . C 3 -0.281 -6.293 11.328 1 22.92 ? C8 HYK 402 A 1 HETATM 8 C C10 HYK . . . C 3 -3.472 -2.016 11.672 1 20.11 ? C10 HYK 402 A 1 HETATM 9 C C13 HYK . . . C 3 -3.076 -1.081 10.528 1 20.53 ? C13 HYK 402 A 1 HETATM 10 C C15 HYK . . . C 3 2.398 -1.886 16.904 1 20.87 ? C15 HYK 402 A 1 HETATM 11 C C17 HYK . . . C 3 2.164 -2.036 19.319 1 28.88 ? C17 HYK 402 A 1 HETATM 12 C C20 HYK . . . C 3 3.746 -1.181 17.042 1 20.67 ? C20 HYK 402 A 1 HETATM 13 C C21 HYK . . . C 3 4.431 -0.754 15.916 1 20.25 ? C21 HYK 402 A 1 HETATM 14 C C22 HYK . . . C 3 5.639 -0.082 16.035 1 21.27 ? C22 HYK 402 A 1 HETATM 15 C C24 HYK . . . C 3 5.482 -0.267 18.43 1 24.49 ? C24 HYK 402 A 1 HETATM 16 C C26 HYK . . . C 3 2.418 1.113 21.907 1 34.75 ? C26 HYK 402 A 1 HETATM 17 C C28 HYK . . . C 3 1.552 2.943 23.331 1 35.03 ? C28 HYK 402 A 1 HETATM 18 C C9 HYK . . . C 3 1.205 -9.641 12.251 1 23.81 ? C9 HYK 402 A 1 HETATM 19 C C3 HYK . . . C 3 -0.362 -5.681 12.557 1 19.15 ? C3 HYK 402 A 1 HETATM 20 N N HYK . . . C 3 -2.051 -4.051 11.947 1 19.16 ? N HYK 402 A 1 HETATM 21 C C2 HYK . . . C 3 -2.248 -2.76 12.198 1 19.85 ? C2 HYK 402 A 1 HETATM 22 C C12 HYK . . . C 3 -4.11 -1.176 12.783 1 19.81 ? C12 HYK 402 A 1 HETATM 23 C C11 HYK . . . C 3 -4.509 -3.013 11.138 1 20.34 ? C11 HYK 402 A 1 HETATM 24 C C1 HYK . . . C 3 -1.255 -2.266 13.061 1 19.1 ? C1 HYK 402 A 1 HETATM 25 C C HYK . . . C 3 -0.386 -3.288 13.259 1 18.86 ? C HYK 402 A 1 HETATM 26 N N2 HYK . . . C 3 0.762 -3.321 14.034 1 20.3 ? N2 HYK 402 A 1 HETATM 27 C C14 HYK . . . C 3 0.962 -2.517 15.108 1 21.18 ? C14 HYK 402 A 1 HETATM 28 O O1 HYK . . . C 3 0.075 -1.732 15.544 1 17.65 ? O1 HYK 402 A 1 HETATM 29 C C16 HYK . . . C 3 2.119 -2.822 18.061 1 23.61 ? C16 HYK 402 A 1 HETATM 30 C C18 HYK . . . C 3 3.543 -1.464 19.534 1 27.34 ? C18 HYK 402 A 1 HETATM 31 O O HYK . . . C 3 3.349 -0.477 20.573 1 39.52 ? O HYK 402 A 1 HETATM 32 C C25 HYK . . . C 3 2.9 0.806 20.624 1 35.29 ? C25 HYK 402 A 1 HETATM 33 C C33 HYK . . . C 3 2.972 1.776 19.641 1 31.81 ? C33 HYK 402 A 1 HETATM 34 C C32 HYK . . . C 3 2.603 3.08 19.938 1 30.84 ? C32 HYK 402 A 1 HETATM 35 C C27 HYK . . . C 3 2.125 3.368 21.253 1 29.5 ? C27 HYK 402 A 1 HETATM 36 N N5 HYK . . . C 3 1.695 4.495 21.783 1 32.85 ? N5 HYK 402 A 1 HETATM 37 N N6 HYK . . . C 3 1.334 4.206 23.112 1 35.19 ? N6 HYK 402 A 1 HETATM 38 C C29 HYK . . . C 3 1.249 2.125 24.541 1 39.12 ? C29 HYK 402 A 1 HETATM 39 C C31 HYK . . . C 3 -0.125 1.471 24.36 1 41.13 ? C31 HYK 402 A 1 HETATM 40 C C30 HYK . . . C 3 1.318 2.917 25.845 1 37.66 ? C30 HYK 402 A 1 HETATM 41 N N4 HYK . . . C 3 2.028 2.39 22.192 1 32.57 ? N4 HYK 402 A 1 HETATM 42 C C19 HYK . . . C 3 4.235 -0.895 18.314 1 24.31 ? C19 HYK 402 A 1 HETATM 43 C C23 HYK . . . C 3 6.157 0.151 17.294 1 21.07 ? C23 HYK 402 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #