data_6QE4
#
_model_server_result.job_id            sS_rMy7h8wbpZj4wpH4J2g 
_model_server_result.datetime_utc      '2024-11-23 05:10:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6qe4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    6QE4 
#
_exptl.entry_id    6QE4 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              558.835 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         77.92 
_cell.angle_beta          75.63 
_cell.angle_gamma         71.67 
_cell.entry_id            6QE4 
_cell.length_a            38.111 
_cell.length_b            43.048 
_cell.length_c            59.281 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6QE4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
_chem_comp.formula           'C8 H4 I3 N O4' 
_chem_comp.formula_weight    558.835 
_chem_comp.id                I3C 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '5-Amino-2,4,6-triiodoisophthalic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
I3 C6 I3C sing 152 n n 
I2 C4 I3C sing 153 n n 
I1 C2 I3C sing 154 n n 
O8 C7 I3C doub 155 n n 
O9 C7 I3C sing 156 n n 
C10 C3 I3C sing 157 n n 
C10 O11 I3C sing 158 n n 
C10 O12 I3C doub 159 n n 
N13 C5 I3C sing 160 n n 
C1 C6 I3C doub 161 n y 
C1 C2 I3C sing 162 n y 
C1 C7 I3C sing 163 n n 
C6 C5 I3C sing 164 n y 
C5 C4 I3C doub 165 n y 
C4 C3 I3C sing 166 n y 
C3 C2 I3C doub 167 n y 
O9 HO9 I3C sing 168 n n 
N13 HN13 I3C sing 169 n n 
N13 HN1A I3C sing 170 n n 
O11 HO11 I3C sing 171 n n 
#
_atom_sites.entry_id                     6QE4 
_atom_sites.fract_transf_matrix[1][1]    0.026239 
_atom_sites.fract_transf_matrix[1][2]    -0.008695 
_atom_sites.fract_transf_matrix[1][3]    -0.005538 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024472 
_atom_sites.fract_transf_matrix[2][3]    -0.003526 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017593 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 I3C A 1 401 401 I3C I3C . 
C 2 I3C A 1 402 402 I3C I3C . 
D 2 I3C A 1 403 403 I3C I3C . 
E 2 I3C A 1 404 404 I3C I3C . 
F 3 HOH A 1 501 501 HOH HOH . 
F 3 HOH A 2 502 502 HOH HOH . 
F 3 HOH A 3 503 503 HOH HOH . 
F 3 HOH A 4 504 504 HOH HOH . 
F 3 HOH A 5 505 505 HOH HOH . 
F 3 HOH A 6 506 506 HOH HOH . 
F 3 HOH A 7 507 507 HOH HOH . 
F 3 HOH A 8 508 508 HOH HOH . 
F 3 HOH A 9 509 509 HOH HOH . 
F 3 HOH A 10 510 510 HOH HOH . 
F 3 HOH A 11 511 511 HOH HOH . 
F 3 HOH A 12 512 512 HOH HOH . 
F 3 HOH A 13 513 513 HOH HOH . 
F 3 HOH A 14 514 514 HOH HOH . 
F 3 HOH A 15 515 515 HOH HOH . 
F 3 HOH A 16 516 516 HOH HOH . 
F 3 HOH A 17 517 517 HOH HOH . 
F 3 HOH A 18 518 518 HOH HOH . 
F 3 HOH A 19 519 519 HOH HOH . 
F 3 HOH A 20 520 520 HOH HOH . 
F 3 HOH A 21 521 521 HOH HOH . 
F 3 HOH A 22 522 522 HOH HOH . 
F 3 HOH A 23 523 523 HOH HOH . 
F 3 HOH A 24 524 524 HOH HOH . 
F 3 HOH A 25 525 525 HOH HOH . 
F 3 HOH A 26 526 526 HOH HOH . 
F 3 HOH A 27 527 527 HOH HOH . 
F 3 HOH A 28 528 528 HOH HOH . 
F 3 HOH A 29 530 530 HOH HOH . 
F 3 HOH A 30 531 531 HOH HOH . 
F 3 HOH A 31 532 532 HOH HOH . 
F 3 HOH A 32 533 533 HOH HOH . 
F 3 HOH A 33 534 534 HOH HOH . 
F 3 HOH A 34 535 535 HOH HOH . 
F 3 HOH A 35 536 536 HOH HOH . 
F 3 HOH A 36 537 537 HOH HOH . 
F 3 HOH A 37 538 538 HOH HOH . 
F 3 HOH A 38 539 539 HOH HOH . 
F 3 HOH A 39 540 540 HOH HOH . 
F 3 HOH A 40 541 541 HOH HOH . 
F 3 HOH A 41 542 542 HOH HOH . 
F 3 HOH A 42 543 543 HOH HOH . 
F 3 HOH A 43 544 544 HOH HOH . 
F 3 HOH A 44 545 545 HOH HOH . 
F 3 HOH A 45 546 546 HOH HOH . 
F 3 HOH A 46 547 547 HOH HOH . 
F 3 HOH A 47 548 548 HOH HOH . 
F 3 HOH A 48 549 549 HOH HOH . 
F 3 HOH A 49 550 550 HOH HOH . 
F 3 HOH A 50 551 551 HOH HOH . 
F 3 HOH A 51 552 552 HOH HOH . 
F 3 HOH A 52 553 553 HOH HOH . 
F 3 HOH A 53 554 554 HOH HOH . 
F 3 HOH A 54 555 555 HOH HOH . 
F 3 HOH A 55 556 556 HOH HOH . 
F 3 HOH A 56 557 557 HOH HOH . 
F 3 HOH A 57 558 558 HOH HOH . 
F 3 HOH A 58 559 559 HOH HOH . 
F 3 HOH A 59 560 560 HOH HOH . 
F 3 HOH A 60 561 561 HOH HOH . 
F 3 HOH A 61 562 562 HOH HOH . 
F 3 HOH A 62 564 564 HOH HOH . 
F 3 HOH A 63 565 565 HOH HOH . 
F 3 HOH A 64 566 566 HOH HOH . 
F 3 HOH A 65 567 567 HOH HOH . 
F 3 HOH A 66 568 568 HOH HOH . 
F 3 HOH A 67 569 569 HOH HOH . 
F 3 HOH A 68 570 570 HOH HOH . 
F 3 HOH A 69 571 571 HOH HOH . 
F 3 HOH A 70 572 572 HOH HOH . 
F 3 HOH A 71 573 573 HOH HOH . 
F 3 HOH A 72 574 574 HOH HOH . 
F 3 HOH A 73 575 575 HOH HOH . 
F 3 HOH A 74 576 576 HOH HOH . 
F 3 HOH A 75 577 577 HOH HOH . 
F 3 HOH A 76 578 578 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 I I3 I3C . . . E 2 44.001 41.826 34.786 0.4 23.67 ? I3 I3C 404 A 1 
HETATM 2 I I2 I3C . . . E 2 49.576 39.712 34.071 0.4 52.22 ? I2 I3C 404 A 1 
HETATM 3 I I1 I3C . . . E 2 45.134 35.858 33.703 0.4 32.63 ? I1 I3C 404 A 1 
HETATM 4 O O8 I3C . . . E 2 42.983 37.798 33.258 0.4 34.04 ? O8 I3C 404 A 1 
HETATM 5 O O9 I3C . . . E 2 42.813 39.088 34.942 0.4 36.32 ? O9 I3C 404 A 1 
HETATM 6 C C10 I3C . . . E 2 48.108 36.938 33.853 0.4 38.95 ? C10 I3C 404 A 1 
HETATM 7 N N13 I3C . . . E 2 47.204 41.809 34.411 0.4 33.78 ? N13 I3C 404 A 1 
HETATM 8 C C1 I3C . . . E 2 44.886 38.911 34.076 0.4 33.44 ? C1 I3C 404 A 1 
HETATM 9 C C6 I3C . . . E 2 45.309 40.275 34.304 0.4 30.44 ? C6 I3C 404 A 1 
HETATM 10 C C5 I3C . . . E 2 46.718 40.529 34.286 0.4 35.12 ? C5 I3C 404 A 1 
HETATM 11 C C4 I3C . . . E 2 47.613 39.407 34.104 0.4 41.97 ? C4 I3C 404 A 1 
HETATM 12 C C3 I3C . . . E 2 47.161 38.083 33.943 0.4 38.59 ? C3 I3C 404 A 1 
HETATM 13 C C2 I3C . . . E 2 45.79 37.804 33.912 0.4 34.98 ? C2 I3C 404 A 1 
HETATM 14 C C7 I3C . . . E 2 43.504 38.547 34.003 0.4 34.62 ? C7 I3C 404 A 1 
HETATM 15 O O11 I3C . . . E 2 48.626 36.581 35.045 0.4 38.73 ? O11 I3C 404 A 1 
HETATM 16 O O12 I3C . . . E 2 48.424 36.333 32.846 0.4 39.78 ? O12 I3C 404 A 1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           16 
#