data_6QE6
#
_model_server_result.job_id            12JE9Xzki7vnC8wrGGPp2w 
_model_server_result.datetime_utc      '2024-11-25 09:31:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6qe6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    6QE6 
#
_exptl.entry_id    6QE6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              384.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYL-L-HOMOCYSTEINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.88 
_cell.angle_gamma         90 
_cell.entry_id            6QE6 
_cell.length_a            40.76 
_cell.length_b            131.09 
_cell.length_c            58.47 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6QE6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C14 H20 N6 O5 S' 
_chem_comp.formula_weight    384.411 
_chem_comp.id                SAH 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              S-ADENOSYL-L-HOMOCYSTEINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAH sing 277 n n 
N HN1 SAH sing 278 n n 
N HN2 SAH sing 279 n n 
CA CB SAH sing 280 n n 
CA C SAH sing 281 n n 
CA HA SAH sing 282 n n 
CB CG SAH sing 283 n n 
CB HB1 SAH sing 284 n n 
CB HB2 SAH sing 285 n n 
CG SD SAH sing 286 n n 
CG HG1 SAH sing 287 n n 
CG HG2 SAH sing 288 n n 
SD C5' SAH sing 289 n n 
C O SAH doub 290 n n 
C OXT SAH sing 291 n n 
OXT HXT SAH sing 292 n n 
C5' C4' SAH sing 293 n n 
C5' "H5'1" SAH sing 294 n n 
C5' "H5'2" SAH sing 295 n n 
C4' O4' SAH sing 296 n n 
C4' C3' SAH sing 297 n n 
C4' H4' SAH sing 298 n n 
O4' C1' SAH sing 299 n n 
C3' O3' SAH sing 300 n n 
C3' C2' SAH sing 301 n n 
C3' H3' SAH sing 302 n n 
O3' HO3' SAH sing 303 n n 
C2' O2' SAH sing 304 n n 
C2' C1' SAH sing 305 n n 
C2' H2' SAH sing 306 n n 
O2' HO2' SAH sing 307 n n 
C1' N9 SAH sing 308 n n 
C1' H1' SAH sing 309 n n 
N9 C8 SAH sing 310 n y 
N9 C4 SAH sing 311 n y 
C8 N7 SAH doub 312 n y 
C8 H8 SAH sing 313 n n 
N7 C5 SAH sing 314 n y 
C5 C6 SAH sing 315 n y 
C5 C4 SAH doub 316 n y 
C6 N6 SAH sing 317 n n 
C6 N1 SAH doub 318 n y 
N6 HN61 SAH sing 319 n n 
N6 HN62 SAH sing 320 n n 
N1 C2 SAH sing 321 n y 
C2 N3 SAH doub 322 n y 
C2 H2 SAH sing 323 n n 
N3 C4 SAH sing 324 n y 
#
_atom_sites.entry_id                     6QE6 
_atom_sites.fract_transf_matrix[1][1]    0.024534 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006062 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007628 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017617 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SAH A 1 301 281 SAH SAH . 
D 2 SAH B 1 301 281 SAH SAH . 
E 3 HOH A 1 401 176 HOH HOH . 
E 3 HOH A 2 402 85 HOH HOH . 
E 3 HOH A 3 403 95 HOH HOH . 
E 3 HOH A 4 404 49 HOH HOH . 
E 3 HOH A 5 405 66 HOH HOH . 
E 3 HOH A 6 406 69 HOH HOH . 
E 3 HOH A 7 407 68 HOH HOH . 
E 3 HOH A 8 408 53 HOH HOH . 
E 3 HOH A 9 409 52 HOH HOH . 
E 3 HOH A 10 410 149 HOH HOH . 
E 3 HOH A 11 411 189 HOH HOH . 
E 3 HOH A 12 412 16 HOH HOH . 
E 3 HOH A 13 413 27 HOH HOH . 
E 3 HOH A 14 414 134 HOH HOH . 
E 3 HOH A 15 415 130 HOH HOH . 
E 3 HOH A 16 416 192 HOH HOH . 
E 3 HOH A 17 417 80 HOH HOH . 
E 3 HOH A 18 418 92 HOH HOH . 
E 3 HOH A 19 419 67 HOH HOH . 
E 3 HOH A 20 420 29 HOH HOH . 
E 3 HOH A 21 421 70 HOH HOH . 
E 3 HOH A 22 422 9 HOH HOH . 
E 3 HOH A 23 423 11 HOH HOH . 
E 3 HOH A 24 424 102 HOH HOH . 
E 3 HOH A 25 425 10 HOH HOH . 
E 3 HOH A 26 426 105 HOH HOH . 
E 3 HOH A 27 427 20 HOH HOH . 
E 3 HOH A 28 428 183 HOH HOH . 
E 3 HOH A 29 429 164 HOH HOH . 
E 3 HOH A 30 430 142 HOH HOH . 
E 3 HOH A 31 431 117 HOH HOH . 
E 3 HOH A 32 432 138 HOH HOH . 
E 3 HOH A 33 433 90 HOH HOH . 
E 3 HOH A 34 434 13 HOH HOH . 
E 3 HOH A 35 435 22 HOH HOH . 
E 3 HOH A 36 436 43 HOH HOH . 
E 3 HOH A 37 437 99 HOH HOH . 
E 3 HOH A 38 438 25 HOH HOH . 
E 3 HOH A 39 439 55 HOH HOH . 
E 3 HOH A 40 440 39 HOH HOH . 
E 3 HOH A 41 441 94 HOH HOH . 
E 3 HOH A 42 442 45 HOH HOH . 
E 3 HOH A 43 443 58 HOH HOH . 
E 3 HOH A 44 444 71 HOH HOH . 
E 3 HOH A 45 445 30 HOH HOH . 
E 3 HOH A 46 446 28 HOH HOH . 
E 3 HOH A 47 447 132 HOH HOH . 
E 3 HOH A 48 448 56 HOH HOH . 
E 3 HOH A 49 449 89 HOH HOH . 
E 3 HOH A 50 450 26 HOH HOH . 
E 3 HOH A 51 451 35 HOH HOH . 
E 3 HOH A 52 452 170 HOH HOH . 
E 3 HOH A 53 453 141 HOH HOH . 
E 3 HOH A 54 454 81 HOH HOH . 
E 3 HOH A 55 455 104 HOH HOH . 
E 3 HOH A 56 456 19 HOH HOH . 
E 3 HOH A 57 457 124 HOH HOH . 
E 3 HOH A 58 458 125 HOH HOH . 
E 3 HOH A 59 459 193 HOH HOH . 
E 3 HOH A 60 460 51 HOH HOH . 
E 3 HOH A 61 461 157 HOH HOH . 
E 3 HOH A 62 462 32 HOH HOH . 
E 3 HOH A 63 463 96 HOH HOH . 
E 3 HOH A 64 464 4 HOH HOH . 
E 3 HOH A 65 465 111 HOH HOH . 
E 3 HOH A 66 466 127 HOH HOH . 
E 3 HOH A 67 467 143 HOH HOH . 
E 3 HOH A 68 468 7 HOH HOH . 
E 3 HOH A 69 469 112 HOH HOH . 
E 3 HOH A 70 470 65 HOH HOH . 
E 3 HOH A 71 471 91 HOH HOH . 
E 3 HOH A 72 472 108 HOH HOH . 
E 3 HOH A 73 473 106 HOH HOH . 
E 3 HOH A 74 474 36 HOH HOH . 
E 3 HOH A 75 475 63 HOH HOH . 
E 3 HOH A 76 476 160 HOH HOH . 
E 3 HOH A 77 477 75 HOH HOH . 
E 3 HOH A 78 478 88 HOH HOH . 
E 3 HOH A 79 479 23 HOH HOH . 
E 3 HOH A 80 480 147 HOH HOH . 
E 3 HOH A 81 481 129 HOH HOH . 
E 3 HOH A 82 482 8 HOH HOH . 
E 3 HOH A 83 483 167 HOH HOH . 
E 3 HOH A 84 484 186 HOH HOH . 
E 3 HOH A 85 485 174 HOH HOH . 
E 3 HOH A 86 486 48 HOH HOH . 
E 3 HOH A 87 487 133 HOH HOH . 
E 3 HOH A 88 488 171 HOH HOH . 
E 3 HOH A 89 489 24 HOH HOH . 
E 3 HOH A 90 490 166 HOH HOH . 
E 3 HOH A 91 491 131 HOH HOH . 
E 3 HOH A 92 492 40 HOH HOH . 
E 3 HOH A 93 493 128 HOH HOH . 
E 3 HOH A 94 494 179 HOH HOH . 
E 3 HOH A 95 495 153 HOH HOH . 
E 3 HOH A 96 496 196 HOH HOH . 
E 3 HOH A 97 497 101 HOH HOH . 
E 3 HOH A 98 498 152 HOH HOH . 
E 3 HOH A 99 499 113 HOH HOH . 
E 3 HOH A 100 500 168 HOH HOH . 
E 3 HOH A 101 501 84 HOH HOH . 
E 3 HOH A 102 502 46 HOH HOH . 
E 3 HOH A 103 503 163 HOH HOH . 
F 3 HOH B 1 401 103 HOH HOH . 
F 3 HOH B 2 402 110 HOH HOH . 
F 3 HOH B 3 403 145 HOH HOH . 
F 3 HOH B 4 404 107 HOH HOH . 
F 3 HOH B 5 405 182 HOH HOH . 
F 3 HOH B 6 406 62 HOH HOH . 
F 3 HOH B 7 407 191 HOH HOH . 
F 3 HOH B 8 408 77 HOH HOH . 
F 3 HOH B 9 409 2 HOH HOH . 
F 3 HOH B 10 410 162 HOH HOH . 
F 3 HOH B 11 411 37 HOH HOH . 
F 3 HOH B 12 412 161 HOH HOH . 
F 3 HOH B 13 413 57 HOH HOH . 
F 3 HOH B 14 414 34 HOH HOH . 
F 3 HOH B 15 415 50 HOH HOH . 
F 3 HOH B 16 416 159 HOH HOH . 
F 3 HOH B 17 417 109 HOH HOH . 
F 3 HOH B 18 418 78 HOH HOH . 
F 3 HOH B 19 419 17 HOH HOH . 
F 3 HOH B 20 420 41 HOH HOH . 
F 3 HOH B 21 421 126 HOH HOH . 
F 3 HOH B 22 422 3 HOH HOH . 
F 3 HOH B 23 423 5 HOH HOH . 
F 3 HOH B 24 424 115 HOH HOH . 
F 3 HOH B 25 425 42 HOH HOH . 
F 3 HOH B 26 426 98 HOH HOH . 
F 3 HOH B 27 427 31 HOH HOH . 
F 3 HOH B 28 428 76 HOH HOH . 
F 3 HOH B 29 429 79 HOH HOH . 
F 3 HOH B 30 430 83 HOH HOH . 
F 3 HOH B 31 431 6 HOH HOH . 
F 3 HOH B 32 432 173 HOH HOH . 
F 3 HOH B 33 433 86 HOH HOH . 
F 3 HOH B 34 434 87 HOH HOH . 
F 3 HOH B 35 435 114 HOH HOH . 
F 3 HOH B 36 436 21 HOH HOH . 
F 3 HOH B 37 437 14 HOH HOH . 
F 3 HOH B 38 438 38 HOH HOH . 
F 3 HOH B 39 439 119 HOH HOH . 
F 3 HOH B 40 440 151 HOH HOH . 
F 3 HOH B 41 441 123 HOH HOH . 
F 3 HOH B 42 442 1 HOH HOH . 
F 3 HOH B 43 443 60 HOH HOH . 
F 3 HOH B 44 444 150 HOH HOH . 
F 3 HOH B 45 445 122 HOH HOH . 
F 3 HOH B 46 446 72 HOH HOH . 
F 3 HOH B 47 447 116 HOH HOH . 
F 3 HOH B 48 448 100 HOH HOH . 
F 3 HOH B 49 449 184 HOH HOH . 
F 3 HOH B 50 450 61 HOH HOH . 
F 3 HOH B 51 451 155 HOH HOH . 
F 3 HOH B 52 452 15 HOH HOH . 
F 3 HOH B 53 453 74 HOH HOH . 
F 3 HOH B 54 454 97 HOH HOH . 
F 3 HOH B 55 455 177 HOH HOH . 
F 3 HOH B 56 456 154 HOH HOH . 
F 3 HOH B 57 457 33 HOH HOH . 
F 3 HOH B 58 458 188 HOH HOH . 
F 3 HOH B 59 459 172 HOH HOH . 
F 3 HOH B 60 460 148 HOH HOH . 
F 3 HOH B 61 461 12 HOH HOH . 
F 3 HOH B 62 462 180 HOH HOH . 
F 3 HOH B 63 463 18 HOH HOH . 
F 3 HOH B 64 464 194 HOH HOH . 
F 3 HOH B 65 465 135 HOH HOH . 
F 3 HOH B 66 466 175 HOH HOH . 
F 3 HOH B 67 467 139 HOH HOH . 
F 3 HOH B 68 468 178 HOH HOH . 
F 3 HOH B 69 469 187 HOH HOH . 
F 3 HOH B 70 470 118 HOH HOH . 
F 3 HOH B 71 471 195 HOH HOH . 
F 3 HOH B 72 472 165 HOH HOH . 
F 3 HOH B 73 473 120 HOH HOH . 
F 3 HOH B 74 474 73 HOH HOH . 
F 3 HOH B 75 475 140 HOH HOH . 
F 3 HOH B 76 476 121 HOH HOH . 
F 3 HOH B 77 477 93 HOH HOH . 
F 3 HOH B 78 478 158 HOH HOH . 
F 3 HOH B 79 479 44 HOH HOH . 
F 3 HOH B 80 480 156 HOH HOH . 
F 3 HOH B 81 481 185 HOH HOH . 
F 3 HOH B 82 482 47 HOH HOH . 
F 3 HOH B 83 483 169 HOH HOH . 
F 3 HOH B 84 484 190 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAH . . . C 2 0.697 -4.593 29.801 1 38.94 ? N SAH 301 A 1 
HETATM 2 C CA SAH . . . C 2 0.713 -6.021 30.1 1 46.14 ? CA SAH 301 A 1 
HETATM 3 C CB SAH . . . C 2 -0.421 -6.745 29.359 1 44.47 ? CB SAH 301 A 1 
HETATM 4 C CG SAH . . . C 2 -0.33 -6.797 27.833 1 42.47 ? CG SAH 301 A 1 
HETATM 5 S SD SAH . . . C 2 -1.653 -7.804 27.111 1 43.17 ? SD SAH 301 A 1 
HETATM 6 C C SAH . . . C 2 2.061 -6.656 29.747 1 51.39 ? C SAH 301 A 1 
HETATM 7 O O SAH . . . C 2 2.833 -6.106 28.954 1 51.09 ? O SAH 301 A 1 
HETATM 8 O OXT SAH . . . C 2 2.409 -7.735 30.241 1 50.53 ? OXT SAH 301 A 1 
HETATM 9 C C5' SAH . . . C 2 -2.132 -6.47 25.989 1 38.65 ? C5' SAH 301 A 1 
HETATM 10 C C4' SAH . . . C 2 -3.233 -5.595 26.579 1 38.42 ? C4' SAH 301 A 1 
HETATM 11 O O4' SAH . . . C 2 -3.395 -4.454 25.77 1 35.97 ? O4' SAH 301 A 1 
HETATM 12 C C3' SAH . . . C 2 -4.583 -6.288 26.594 1 38.23 ? C3' SAH 301 A 1 
HETATM 13 O O3' SAH . . . C 2 -5.146 -6.188 27.882 1 41.27 ? O3' SAH 301 A 1 
HETATM 14 C C2' SAH . . . C 2 -5.434 -5.516 25.6 1 39.93 ? C2' SAH 301 A 1 
HETATM 15 O O2' SAH . . . C 2 -6.751 -5.436 26.072 1 40.22 ? O2' SAH 301 A 1 
HETATM 16 C C1' SAH . . . C 2 -4.755 -4.165 25.57 1 34.8 ? C1' SAH 301 A 1 
HETATM 17 N N9 SAH . . . C 2 -4.885 -3.466 24.291 1 36.12 ? N9 SAH 301 A 1 
HETATM 18 C C8 SAH . . . C 2 -4.843 -4.009 23.039 1 35.71 ? C8 SAH 301 A 1 
HETATM 19 N N7 SAH . . . C 2 -4.987 -2.996 22.142 1 30.92 ? N7 SAH 301 A 1 
HETATM 20 C C5 SAH . . . C 2 -5.111 -1.838 22.8 1 30.59 ? C5 SAH 301 A 1 
HETATM 21 C C6 SAH . . . C 2 -5.289 -0.533 22.368 1 35.55 ? C6 SAH 301 A 1 
HETATM 22 N N6 SAH . . . C 2 -5.36 -0.247 21.07 1 33.22 ? N6 SAH 301 A 1 
HETATM 23 N N1 SAH . . . C 2 -5.395 0.469 23.305 1 32.47 ? N1 SAH 301 A 1 
HETATM 24 C C2 SAH . . . C 2 -5.318 0.184 24.654 1 32.92 ? C2 SAH 301 A 1 
HETATM 25 N N3 SAH . . . C 2 -5.143 -1.12 25.066 1 34.55 ? N3 SAH 301 A 1 
HETATM 26 C C4 SAH . . . C 2 -5.041 -2.113 24.153 1 30.52 ? C4 SAH 301 A 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           26 
#