data_6QFC # _model_server_result.job_id 4rP0-EELGwGjB3Q6EVOqAg _model_server_result.datetime_utc '2024-11-05 04:07:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qfc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":303}' # _entry.id 6QFC # _exptl.entry_id 6QFC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.55 _cell.angle_gamma 90 _cell.entry_id 6QFC _cell.length_a 142.852 _cell.length_b 40.458 _cell.length_c 76.237 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QFC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf2 B SG CYS 157 B CYS 157 1_555 B SG CYS 224 B CYS 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6QFC _atom_sites.fract_transf_matrix[1][1] 0.007 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002624 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024717 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014008 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DMS A 1 401 4 DMS DMS . D 3 DMS B 1 301 1 DMS DMS . E 3 DMS B 1 302 2 DMS DMS . F 3 DMS B 1 303 3 DMS DMS . G 3 DMS B 1 304 5 DMS DMS . H 4 HOH A 1 501 88 HOH HOH . H 4 HOH A 2 502 186 HOH HOH . H 4 HOH A 3 503 101 HOH HOH . H 4 HOH A 4 504 54 HOH HOH . H 4 HOH A 5 505 69 HOH HOH . H 4 HOH A 6 506 229 HOH HOH . H 4 HOH A 7 507 104 HOH HOH . H 4 HOH A 8 508 140 HOH HOH . H 4 HOH A 9 509 205 HOH HOH . H 4 HOH A 10 510 11 HOH HOH . H 4 HOH A 11 511 201 HOH HOH . H 4 HOH A 12 512 55 HOH HOH . H 4 HOH A 13 513 4 HOH HOH . H 4 HOH A 14 514 56 HOH HOH . H 4 HOH A 15 515 246 HOH HOH . H 4 HOH A 16 516 198 HOH HOH . H 4 HOH A 17 517 170 HOH HOH . H 4 HOH A 18 518 132 HOH HOH . H 4 HOH A 19 519 130 HOH HOH . H 4 HOH A 20 520 195 HOH HOH . H 4 HOH A 21 521 116 HOH HOH . H 4 HOH A 22 522 122 HOH HOH . H 4 HOH A 23 523 207 HOH HOH . H 4 HOH A 24 524 172 HOH HOH . H 4 HOH A 25 525 206 HOH HOH . H 4 HOH A 26 526 160 HOH HOH . H 4 HOH A 27 527 217 HOH HOH . H 4 HOH A 28 528 245 HOH HOH . H 4 HOH A 29 529 159 HOH HOH . H 4 HOH A 30 530 212 HOH HOH . H 4 HOH A 31 531 61 HOH HOH . H 4 HOH A 32 532 236 HOH HOH . H 4 HOH A 33 533 138 HOH HOH . H 4 HOH A 34 534 110 HOH HOH . H 4 HOH A 35 535 227 HOH HOH . I 4 HOH B 1 401 67 HOH HOH . I 4 HOH B 2 402 14 HOH HOH . I 4 HOH B 3 403 30 HOH HOH . I 4 HOH B 4 404 47 HOH HOH . I 4 HOH B 5 405 102 HOH HOH . I 4 HOH B 6 406 86 HOH HOH . I 4 HOH B 7 407 9 HOH HOH . I 4 HOH B 8 408 109 HOH HOH . I 4 HOH B 9 409 147 HOH HOH . I 4 HOH B 10 410 112 HOH HOH . I 4 HOH B 11 411 21 HOH HOH . I 4 HOH B 12 412 194 HOH HOH . I 4 HOH B 13 413 68 HOH HOH . I 4 HOH B 14 414 24 HOH HOH . I 4 HOH B 15 415 125 HOH HOH . I 4 HOH B 16 416 34 HOH HOH . I 4 HOH B 17 417 141 HOH HOH . I 4 HOH B 18 418 38 HOH HOH . I 4 HOH B 19 419 16 HOH HOH . I 4 HOH B 20 420 57 HOH HOH . I 4 HOH B 21 421 49 HOH HOH . I 4 HOH B 22 422 43 HOH HOH . I 4 HOH B 23 423 45 HOH HOH . I 4 HOH B 24 424 127 HOH HOH . I 4 HOH B 25 425 91 HOH HOH . I 4 HOH B 26 426 119 HOH HOH . I 4 HOH B 27 427 15 HOH HOH . I 4 HOH B 28 428 46 HOH HOH . I 4 HOH B 29 429 48 HOH HOH . I 4 HOH B 30 430 39 HOH HOH . I 4 HOH B 31 431 5 HOH HOH . I 4 HOH B 32 432 17 HOH HOH . I 4 HOH B 33 433 93 HOH HOH . I 4 HOH B 34 434 106 HOH HOH . I 4 HOH B 35 435 64 HOH HOH . I 4 HOH B 36 436 83 HOH HOH . I 4 HOH B 37 437 144 HOH HOH . I 4 HOH B 38 438 32 HOH HOH . I 4 HOH B 39 439 25 HOH HOH . I 4 HOH B 40 440 221 HOH HOH . I 4 HOH B 41 441 53 HOH HOH . I 4 HOH B 42 442 242 HOH HOH . I 4 HOH B 43 443 118 HOH HOH . I 4 HOH B 44 444 150 HOH HOH . I 4 HOH B 45 445 31 HOH HOH . I 4 HOH B 46 446 223 HOH HOH . I 4 HOH B 47 447 62 HOH HOH . I 4 HOH B 48 448 12 HOH HOH . I 4 HOH B 49 449 42 HOH HOH . I 4 HOH B 50 450 60 HOH HOH . I 4 HOH B 51 451 2 HOH HOH . I 4 HOH B 52 452 133 HOH HOH . I 4 HOH B 53 453 20 HOH HOH . I 4 HOH B 54 454 135 HOH HOH . I 4 HOH B 55 455 58 HOH HOH . I 4 HOH B 56 456 218 HOH HOH . I 4 HOH B 57 457 50 HOH HOH . I 4 HOH B 58 458 33 HOH HOH . I 4 HOH B 59 459 92 HOH HOH . I 4 HOH B 60 460 99 HOH HOH . I 4 HOH B 61 461 178 HOH HOH . I 4 HOH B 62 462 7 HOH HOH . I 4 HOH B 63 463 59 HOH HOH . I 4 HOH B 64 464 105 HOH HOH . I 4 HOH B 65 465 100 HOH HOH . I 4 HOH B 66 466 241 HOH HOH . I 4 HOH B 67 467 216 HOH HOH . I 4 HOH B 68 468 66 HOH HOH . I 4 HOH B 69 469 96 HOH HOH . I 4 HOH B 70 470 75 HOH HOH . I 4 HOH B 71 471 179 HOH HOH . I 4 HOH B 72 472 1 HOH HOH . I 4 HOH B 73 473 152 HOH HOH . I 4 HOH B 74 474 6 HOH HOH . I 4 HOH B 75 475 158 HOH HOH . I 4 HOH B 76 476 41 HOH HOH . I 4 HOH B 77 477 113 HOH HOH . I 4 HOH B 78 478 176 HOH HOH . I 4 HOH B 79 479 167 HOH HOH . I 4 HOH B 80 480 81 HOH HOH . I 4 HOH B 81 481 13 HOH HOH . I 4 HOH B 82 482 202 HOH HOH . I 4 HOH B 83 483 189 HOH HOH . I 4 HOH B 84 484 74 HOH HOH . I 4 HOH B 85 485 111 HOH HOH . I 4 HOH B 86 486 72 HOH HOH . I 4 HOH B 87 487 78 HOH HOH . I 4 HOH B 88 488 181 HOH HOH . I 4 HOH B 89 489 219 HOH HOH . I 4 HOH B 90 490 124 HOH HOH . I 4 HOH B 91 491 27 HOH HOH . I 4 HOH B 92 492 114 HOH HOH . I 4 HOH B 93 493 222 HOH HOH . I 4 HOH B 94 494 123 HOH HOH . I 4 HOH B 95 495 77 HOH HOH . I 4 HOH B 96 496 73 HOH HOH . I 4 HOH B 97 497 63 HOH HOH . I 4 HOH B 98 498 173 HOH HOH . I 4 HOH B 99 499 137 HOH HOH . I 4 HOH B 100 500 203 HOH HOH . I 4 HOH B 101 501 10 HOH HOH . I 4 HOH B 102 502 40 HOH HOH . I 4 HOH B 103 503 220 HOH HOH . I 4 HOH B 104 504 136 HOH HOH . I 4 HOH B 105 505 183 HOH HOH . I 4 HOH B 106 506 29 HOH HOH . I 4 HOH B 107 507 244 HOH HOH . I 4 HOH B 108 508 87 HOH HOH . I 4 HOH B 109 509 82 HOH HOH . I 4 HOH B 110 510 26 HOH HOH . I 4 HOH B 111 511 204 HOH HOH . I 4 HOH B 112 512 129 HOH HOH . I 4 HOH B 113 513 230 HOH HOH . I 4 HOH B 114 514 234 HOH HOH . I 4 HOH B 115 515 211 HOH HOH . I 4 HOH B 116 516 187 HOH HOH . I 4 HOH B 117 517 240 HOH HOH . I 4 HOH B 118 518 70 HOH HOH . I 4 HOH B 119 519 3 HOH HOH . I 4 HOH B 120 520 145 HOH HOH . I 4 HOH B 121 521 243 HOH HOH . I 4 HOH B 122 522 131 HOH HOH . I 4 HOH B 123 523 44 HOH HOH . I 4 HOH B 124 524 90 HOH HOH . I 4 HOH B 125 525 85 HOH HOH . I 4 HOH B 126 526 95 HOH HOH . I 4 HOH B 127 527 79 HOH HOH . I 4 HOH B 128 528 171 HOH HOH . I 4 HOH B 129 529 168 HOH HOH . I 4 HOH B 130 530 192 HOH HOH . I 4 HOH B 131 531 18 HOH HOH . I 4 HOH B 132 532 51 HOH HOH . I 4 HOH B 133 533 8 HOH HOH . I 4 HOH B 134 534 164 HOH HOH . I 4 HOH B 135 535 184 HOH HOH . I 4 HOH B 136 536 180 HOH HOH . I 4 HOH B 137 537 23 HOH HOH . I 4 HOH B 138 538 151 HOH HOH . I 4 HOH B 139 539 107 HOH HOH . I 4 HOH B 140 540 22 HOH HOH . I 4 HOH B 141 541 191 HOH HOH . I 4 HOH B 142 542 248 HOH HOH . I 4 HOH B 143 543 35 HOH HOH . I 4 HOH B 144 544 126 HOH HOH . I 4 HOH B 145 545 148 HOH HOH . I 4 HOH B 146 546 225 HOH HOH . I 4 HOH B 147 547 197 HOH HOH . I 4 HOH B 148 548 117 HOH HOH . I 4 HOH B 149 549 177 HOH HOH . I 4 HOH B 150 550 97 HOH HOH . I 4 HOH B 151 551 154 HOH HOH . I 4 HOH B 152 552 162 HOH HOH . I 4 HOH B 153 553 142 HOH HOH . I 4 HOH B 154 554 193 HOH HOH . I 4 HOH B 155 555 213 HOH HOH . I 4 HOH B 156 556 65 HOH HOH . I 4 HOH B 157 557 19 HOH HOH . I 4 HOH B 158 558 156 HOH HOH . I 4 HOH B 159 559 36 HOH HOH . I 4 HOH B 160 560 175 HOH HOH . I 4 HOH B 161 561 120 HOH HOH . I 4 HOH B 162 562 108 HOH HOH . I 4 HOH B 163 563 214 HOH HOH . I 4 HOH B 164 564 182 HOH HOH . I 4 HOH B 165 565 166 HOH HOH . I 4 HOH B 166 566 52 HOH HOH . I 4 HOH B 167 567 84 HOH HOH . I 4 HOH B 168 568 200 HOH HOH . I 4 HOH B 169 569 98 HOH HOH . I 4 HOH B 170 570 208 HOH HOH . I 4 HOH B 171 571 80 HOH HOH . I 4 HOH B 172 572 146 HOH HOH . I 4 HOH B 173 573 190 HOH HOH . I 4 HOH B 174 574 226 HOH HOH . I 4 HOH B 175 575 163 HOH HOH . I 4 HOH B 176 576 37 HOH HOH . I 4 HOH B 177 577 103 HOH HOH . I 4 HOH B 178 578 165 HOH HOH . I 4 HOH B 179 579 153 HOH HOH . I 4 HOH B 180 580 185 HOH HOH . I 4 HOH B 181 581 209 HOH HOH . I 4 HOH B 182 582 196 HOH HOH . I 4 HOH B 183 583 247 HOH HOH . I 4 HOH B 184 584 174 HOH HOH . I 4 HOH B 185 585 199 HOH HOH . I 4 HOH B 186 586 235 HOH HOH . I 4 HOH B 187 587 239 HOH HOH . I 4 HOH B 188 588 143 HOH HOH . I 4 HOH B 189 589 188 HOH HOH . I 4 HOH B 190 590 231 HOH HOH . I 4 HOH B 191 591 155 HOH HOH . I 4 HOH B 192 592 215 HOH HOH . I 4 HOH B 193 593 28 HOH HOH . I 4 HOH B 194 594 237 HOH HOH . I 4 HOH B 195 595 128 HOH HOH . I 4 HOH B 196 596 224 HOH HOH . I 4 HOH B 197 597 149 HOH HOH . I 4 HOH B 198 598 157 HOH HOH . I 4 HOH B 199 599 228 HOH HOH . I 4 HOH B 200 600 94 HOH HOH . I 4 HOH B 201 601 76 HOH HOH . I 4 HOH B 202 602 134 HOH HOH . I 4 HOH B 203 603 161 HOH HOH . I 4 HOH B 204 604 89 HOH HOH . I 4 HOH B 205 605 121 HOH HOH . I 4 HOH B 206 606 232 HOH HOH . I 4 HOH B 207 607 238 HOH HOH . I 4 HOH B 208 608 233 HOH HOH . I 4 HOH B 209 609 71 HOH HOH . I 4 HOH B 210 610 169 HOH HOH . I 4 HOH B 211 611 115 HOH HOH . I 4 HOH B 212 612 139 HOH HOH . I 4 HOH B 213 613 210 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . F 3 -8.281 16.724 8.718 1 94.79 ? S DMS 303 B 1 HETATM 2 O O DMS . . . F 3 -8.49 17.283 10.064 1 95.68 ? O DMS 303 B 1 HETATM 3 C C1 DMS . . . F 3 -6.717 17.364 8.203 1 93.97 ? C1 DMS 303 B 1 HETATM 4 C C2 DMS . . . F 3 -7.84 15.029 8.98 1 94.19 ? C2 DMS 303 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #