data_6QFM # _model_server_result.job_id 3ItTi2LHl-yNgoEfiKpbFQ _model_server_result.datetime_utc '2024-11-14 09:56:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qfm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 6QFM # _exptl.entry_id 6QFM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QFM _cell.length_a 36.042 _cell.length_b 58.345 _cell.length_c 76.922 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QFM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 59 A HIS 224 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc2 A OD1 ASP 71 A ASP 236 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc3 A OD2 ASP 71 A ASP 236 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc4 A OD2 ASP 77 A ASP 242 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc5 A ND1 HIS 87 A HIS 252 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc6 A NE2 HIS 112 A HIS 277 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc7 C ZN ZN . A ZN 401 4_455 B OD2 ASP 21 B ASP 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc8 C ZN ZN . A ZN 401 1_555 J O HOH . B HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc9 C ZN ZN . A ZN 401 1_555 J O HOH . B HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc10 D ZN ZN . A ZN 402 1_555 J O HOH . B HOH 311 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6QFM _atom_sites.fract_transf_matrix[1][1] 0.027745 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 401 ZN ZN . D 3 ZN A 1 402 402 ZN ZN . E 3 ZN A 1 403 403 ZN ZN . F 4 CL A 1 404 404 CL CL . G 4 CL A 1 405 406 CL CL . H 4 CL B 1 201 405 CL CL . I 5 HOH A 1 501 62 HOH HOH . I 5 HOH A 2 502 60 HOH HOH . I 5 HOH A 3 503 32 HOH HOH . I 5 HOH A 4 504 14 HOH HOH . I 5 HOH A 5 505 44 HOH HOH . I 5 HOH A 6 506 81 HOH HOH . I 5 HOH A 7 507 15 HOH HOH . I 5 HOH A 8 508 85 HOH HOH . I 5 HOH A 9 509 71 HOH HOH . I 5 HOH A 10 510 40 HOH HOH . I 5 HOH A 11 511 36 HOH HOH . I 5 HOH A 12 512 1 HOH HOH . I 5 HOH A 13 513 37 HOH HOH . I 5 HOH A 14 514 46 HOH HOH . I 5 HOH A 15 515 75 HOH HOH . I 5 HOH A 16 516 3 HOH HOH . I 5 HOH A 17 517 65 HOH HOH . I 5 HOH A 18 518 26 HOH HOH . I 5 HOH A 19 519 82 HOH HOH . I 5 HOH A 20 520 72 HOH HOH . I 5 HOH A 21 521 41 HOH HOH . I 5 HOH A 22 522 69 HOH HOH . I 5 HOH A 23 523 30 HOH HOH . I 5 HOH A 24 524 2 HOH HOH . I 5 HOH A 25 525 73 HOH HOH . I 5 HOH A 26 526 4 HOH HOH . I 5 HOH A 27 527 84 HOH HOH . I 5 HOH A 28 528 83 HOH HOH . I 5 HOH A 29 529 78 HOH HOH . I 5 HOH A 30 530 31 HOH HOH . I 5 HOH A 31 531 54 HOH HOH . I 5 HOH A 32 532 70 HOH HOH . I 5 HOH A 33 533 38 HOH HOH . I 5 HOH A 34 534 68 HOH HOH . I 5 HOH A 35 535 80 HOH HOH . I 5 HOH A 36 536 28 HOH HOH . I 5 HOH A 37 537 20 HOH HOH . I 5 HOH A 38 538 11 HOH HOH . I 5 HOH A 39 539 27 HOH HOH . I 5 HOH A 40 540 25 HOH HOH . I 5 HOH A 41 541 67 HOH HOH . I 5 HOH A 42 542 18 HOH HOH . I 5 HOH A 43 543 5 HOH HOH . I 5 HOH A 44 544 42 HOH HOH . I 5 HOH A 45 545 23 HOH HOH . I 5 HOH A 46 546 61 HOH HOH . I 5 HOH A 47 547 10 HOH HOH . I 5 HOH A 48 548 53 HOH HOH . I 5 HOH A 49 549 8 HOH HOH . I 5 HOH A 50 550 16 HOH HOH . I 5 HOH A 51 551 29 HOH HOH . I 5 HOH A 52 552 17 HOH HOH . I 5 HOH A 53 553 79 HOH HOH . I 5 HOH A 54 554 63 HOH HOH . I 5 HOH A 55 555 7 HOH HOH . I 5 HOH A 56 556 35 HOH HOH . I 5 HOH A 57 557 51 HOH HOH . I 5 HOH A 58 558 12 HOH HOH . I 5 HOH A 59 559 74 HOH HOH . I 5 HOH A 60 560 34 HOH HOH . I 5 HOH A 61 561 66 HOH HOH . I 5 HOH A 62 562 86 HOH HOH . I 5 HOH A 63 563 33 HOH HOH . I 5 HOH A 64 564 47 HOH HOH . I 5 HOH A 65 565 6 HOH HOH . I 5 HOH A 66 566 45 HOH HOH . I 5 HOH A 67 567 77 HOH HOH . I 5 HOH A 68 568 58 HOH HOH . J 5 HOH B 1 301 21 HOH HOH . J 5 HOH B 2 302 49 HOH HOH . J 5 HOH B 3 303 13 HOH HOH . J 5 HOH B 4 304 19 HOH HOH . J 5 HOH B 5 305 52 HOH HOH . J 5 HOH B 6 306 50 HOH HOH . J 5 HOH B 7 307 56 HOH HOH . J 5 HOH B 8 308 24 HOH HOH . J 5 HOH B 9 309 9 HOH HOH . J 5 HOH B 10 310 55 HOH HOH . J 5 HOH B 11 311 48 HOH HOH . J 5 HOH B 12 312 43 HOH HOH . J 5 HOH B 13 313 57 HOH HOH . J 5 HOH B 14 314 76 HOH HOH . J 5 HOH B 15 315 59 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -15.952 _atom_site.Cartn_y 11.12 _atom_site.Cartn_z 1.987 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.99 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 210 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #