data_6QFQ # _model_server_result.job_id qx3h1z3GCmmiDeBaeqcxKw _model_server_result.datetime_utc '2024-11-13 13:02:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qfq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6QFQ # _exptl.entry_id 6QFQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 439.506 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '7-(3,5-dimethyl-1~{H}-pyrazol-4-yl)-3-(3-naphthalen-1-yloxypropyl)-1~{H}-indole-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QFQ _cell.length_a 48.064 _cell.length_b 48.064 _cell.length_c 148.47 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QFQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C27 H25 N3 O3' _chem_comp.formula_weight 439.506 _chem_comp.id J3E _chem_comp.mon_nstd_flag . _chem_comp.name '7-(3,5-dimethyl-1~{H}-pyrazol-4-yl)-3-(3-naphthalen-1-yloxypropyl)-1~{H}-indole-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 J3E sing 173 n n N C1 J3E doub 174 n y N N1 J3E sing 175 n y C7 C8 J3E doub 176 n y C7 C6 J3E sing 177 n y C1 C5 J3E sing 178 n y N1 C3 J3E sing 179 n y C8 C9 J3E sing 180 n y C5 C3 J3E doub 181 n y C5 C6 J3E sing 182 n n C3 C4 J3E sing 183 n n C20 C21 J3E doub 184 n y C20 C19 J3E sing 185 n y C6 C26 J3E doub 186 n y C18 C19 J3E doub 187 n y C18 C17 J3E sing 188 n y C21 C22 J3E sing 189 n y C19 C24 J3E sing 190 n y C17 C16 J3E doub 191 n y C9 C10 J3E doub 192 n y C22 C23 J3E doub 193 n y C26 C10 J3E sing 194 n y C26 N2 J3E sing 195 n y C24 C23 J3E sing 196 n y C24 C15 J3E doub 197 n y C16 C15 J3E sing 198 n y C10 C11 J3E sing 199 n y C15 O J3E sing 200 n n N2 C25 J3E sing 201 n y O C14 J3E sing 202 n n C11 C25 J3E doub 203 n y C11 C12 J3E sing 204 n n C25 C27 J3E sing 205 n n C14 C13 J3E sing 206 n n C12 C13 J3E sing 207 n n C27 O1 J3E doub 208 n n C27 O2 J3E sing 209 n n C7 H1 J3E sing 210 n n C8 H2 J3E sing 211 n n C9 H3 J3E sing 212 n n C12 H4 J3E sing 213 n n C12 H5 J3E sing 214 n n C13 H6 J3E sing 215 n n C13 H7 J3E sing 216 n n C14 H8 J3E sing 217 n n C14 H9 J3E sing 218 n n C16 H10 J3E sing 219 n n C20 H11 J3E sing 220 n n C21 H12 J3E sing 221 n n C22 H13 J3E sing 222 n n O2 H14 J3E sing 223 n n N2 H15 J3E sing 224 n n C4 H16 J3E sing 225 n n C4 H17 J3E sing 226 n n C4 H18 J3E sing 227 n n N1 H19 J3E sing 228 n n C H20 J3E sing 229 n n C H21 J3E sing 230 n n C H22 J3E sing 231 n n C23 H23 J3E sing 232 n n C18 H24 J3E sing 233 n n C17 H25 J3E sing 234 n n # _atom_sites.entry_id 6QFQ _atom_sites.fract_transf_matrix[1][1] 0.020806 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020806 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006735 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J3E A 1 401 1 J3E LIG . C 2 J3E A 1 402 1 J3E LIG . D 3 HOH A 1 501 69 HOH HOH . D 3 HOH A 2 502 68 HOH HOH . D 3 HOH A 3 503 28 HOH HOH . D 3 HOH A 4 504 31 HOH HOH . D 3 HOH A 5 505 76 HOH HOH . D 3 HOH A 6 506 73 HOH HOH . D 3 HOH A 7 507 54 HOH HOH . D 3 HOH A 8 508 36 HOH HOH . D 3 HOH A 9 509 37 HOH HOH . D 3 HOH A 10 510 42 HOH HOH . D 3 HOH A 11 511 66 HOH HOH . D 3 HOH A 12 512 40 HOH HOH . D 3 HOH A 13 513 15 HOH HOH . D 3 HOH A 14 514 67 HOH HOH . D 3 HOH A 15 515 6 HOH HOH . D 3 HOH A 16 516 41 HOH HOH . D 3 HOH A 17 517 16 HOH HOH . D 3 HOH A 18 518 77 HOH HOH . D 3 HOH A 19 519 58 HOH HOH . D 3 HOH A 20 520 29 HOH HOH . D 3 HOH A 21 521 3 HOH HOH . D 3 HOH A 22 522 34 HOH HOH . D 3 HOH A 23 523 48 HOH HOH . D 3 HOH A 24 524 30 HOH HOH . D 3 HOH A 25 525 10 HOH HOH . D 3 HOH A 26 526 11 HOH HOH . D 3 HOH A 27 527 25 HOH HOH . D 3 HOH A 28 528 75 HOH HOH . D 3 HOH A 29 529 38 HOH HOH . D 3 HOH A 30 530 53 HOH HOH . D 3 HOH A 31 531 18 HOH HOH . D 3 HOH A 32 532 4 HOH HOH . D 3 HOH A 33 533 64 HOH HOH . D 3 HOH A 34 534 78 HOH HOH . D 3 HOH A 35 535 49 HOH HOH . D 3 HOH A 36 536 17 HOH HOH . D 3 HOH A 37 537 62 HOH HOH . D 3 HOH A 38 538 51 HOH HOH . D 3 HOH A 39 539 22 HOH HOH . D 3 HOH A 40 540 57 HOH HOH . D 3 HOH A 41 541 39 HOH HOH . D 3 HOH A 42 542 21 HOH HOH . D 3 HOH A 43 543 1 HOH HOH . D 3 HOH A 44 544 5 HOH HOH . D 3 HOH A 45 545 2 HOH HOH . D 3 HOH A 46 546 7 HOH HOH . D 3 HOH A 47 547 72 HOH HOH . D 3 HOH A 48 548 59 HOH HOH . D 3 HOH A 49 549 20 HOH HOH . D 3 HOH A 50 550 50 HOH HOH . D 3 HOH A 51 551 24 HOH HOH . D 3 HOH A 52 552 35 HOH HOH . D 3 HOH A 53 553 19 HOH HOH . D 3 HOH A 54 554 47 HOH HOH . D 3 HOH A 55 555 44 HOH HOH . D 3 HOH A 56 556 52 HOH HOH . D 3 HOH A 57 557 33 HOH HOH . D 3 HOH A 58 558 43 HOH HOH . D 3 HOH A 59 559 63 HOH HOH . D 3 HOH A 60 560 12 HOH HOH . D 3 HOH A 61 561 9 HOH HOH . D 3 HOH A 62 562 32 HOH HOH . D 3 HOH A 63 563 13 HOH HOH . D 3 HOH A 64 564 55 HOH HOH . D 3 HOH A 65 565 27 HOH HOH . D 3 HOH A 66 566 56 HOH HOH . D 3 HOH A 67 567 74 HOH HOH . D 3 HOH A 68 568 23 HOH HOH . D 3 HOH A 69 569 60 HOH HOH . D 3 HOH A 70 570 65 HOH HOH . D 3 HOH A 71 571 8 HOH HOH . D 3 HOH A 72 572 45 HOH HOH . D 3 HOH A 73 573 70 HOH HOH . D 3 HOH A 74 574 71 HOH HOH . D 3 HOH A 75 575 46 HOH HOH . D 3 HOH A 76 576 26 HOH HOH . D 3 HOH A 77 577 14 HOH HOH . D 3 HOH A 78 578 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 J3E . . . B 2 15.064 -19.954 13.782 1 26.35 ? C1 J3E 401 A 1 HETATM 2 C C3 J3E . . . B 2 14.426 -17.769 14.385 1 26.35 ? C3 J3E 401 A 1 HETATM 3 C C7 J3E . . . B 2 11.695 -20.145 13.737 1 16.89 ? C7 J3E 401 A 1 HETATM 4 C C8 J3E . . . B 2 10.425 -20.619 14.075 1 13.71 ? C8 J3E 401 A 1 HETATM 5 C C9 J3E . . . B 2 9.963 -20.642 15.391 1 15.23 ? C9 J3E 401 A 1 HETATM 6 C C10 J3E . . . B 2 10.789 -20.179 16.406 1 17.5 ? C10 J3E 401 A 1 HETATM 7 C C11 J3E . . . B 2 10.602 -20.071 17.867 1 21.62 ? C11 J3E 401 A 1 HETATM 8 C C12 J3E . . . B 2 9.398 -20.458 18.692 1 21.03 ? C12 J3E 401 A 1 HETATM 9 C C13 J3E . . . B 2 9.657 -21.796 19.373 1 21.25 ? C13 J3E 401 A 1 HETATM 10 C C14 J3E . . . B 2 9.474 -22.951 18.394 1 19.78 ? C14 J3E 401 A 1 HETATM 11 C C15 J3E . . . B 2 7.879 -23.693 16.73 1 17.12 ? C15 J3E 401 A 1 HETATM 12 C C16 J3E . . . B 2 8.754 -24.695 16.323 1 18.08 ? C16 J3E 401 A 1 HETATM 13 C C19 J3E . . . B 2 6.169 -24.673 15.122 1 15.4 ? C19 J3E 401 A 1 HETATM 14 C C20 J3E . . . B 2 4.905 -24.648 14.546 1 20.13 ? C20 J3E 401 A 1 HETATM 15 C C21 J3E . . . B 2 4 -23.661 14.927 1 18.11 ? C21 J3E 401 A 1 HETATM 16 C C22 J3E . . . B 2 4.335 -22.696 15.875 1 17.69 ? C22 J3E 401 A 1 HETATM 17 C C24 J3E . . . B 2 6.522 -23.647 16.128 1 15.62 ? C24 J3E 401 A 1 HETATM 18 C C27 J3E . . . B 2 12.116 -19.217 19.775 1 28.69 ? C27 J3E 401 A 1 HETATM 19 O O1 J3E . . . B 2 13.059 -18.469 20.112 1 36.27 ? O1 J3E 401 A 1 HETATM 20 O O2 J3E . . . B 2 11.354 -19.743 20.615 1 30.7 ? O2 J3E 401 A 1 HETATM 21 C C25 J3E . . . B 2 11.892 -19.489 18.327 1 22 ? C25 J3E 401 A 1 HETATM 22 N N2 J3E . . . B 2 12.723 -19.283 17.283 1 24.95 ? N2 J3E 401 A 1 HETATM 23 C C26 J3E . . . B 2 12.146 -19.663 16.123 1 23.38 ? C26 J3E 401 A 1 HETATM 24 C C6 J3E . . . B 2 12.578 -19.665 14.702 1 21.67 ? C6 J3E 401 A 1 HETATM 25 C C5 J3E . . . B 2 13.928 -19.165 14.317 1 23.77 ? C5 J3E 401 A 1 HETATM 26 C C4 J3E . . . B 2 13.66 -16.565 14.863 1 24.97 ? C4 J3E 401 A 1 HETATM 27 N N1 J3E . . . B 2 15.702 -17.787 13.936 1 24.83 ? N1 J3E 401 A 1 HETATM 28 N N J3E . . . B 2 16.078 -19.098 13.576 1 27.74 ? N J3E 401 A 1 HETATM 29 C C J3E . . . B 2 15.079 -21.437 13.52 1 30.94 ? C J3E 401 A 1 HETATM 30 O O J3E . . . B 2 8.261 -22.769 17.666 1 18.81 ? O J3E 401 A 1 HETATM 31 C C23 J3E . . . B 2 5.589 -22.681 16.479 1 15.13 ? C23 J3E 401 A 1 HETATM 32 C C18 J3E . . . B 2 7.11 -25.636 14.777 1 20.41 ? C18 J3E 401 A 1 HETATM 33 C C17 J3E . . . B 2 8.372 -25.64 15.369 1 16.82 ? C17 J3E 401 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 33 #