data_6QG4 # _model_server_result.job_id 8HWzMcTgAnRjDyfPb7YZSQ _model_server_result.datetime_utc '2024-11-15 14:22:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qg4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6QG4 # _exptl.entry_id 6QG4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 366.417 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(3~{R})-3-[4-azanyl-3-(4-hydroxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]propan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QG4 _cell.length_a 60.2 _cell.length_b 67 _cell.length_c 86.1 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QG4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 112 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 218 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C9 _struct_conn.ptnr2_label_comp_id J0E _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id J0E _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.761 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H22 N6 O2' _chem_comp.formula_weight 366.417 _chem_comp.id J0E _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(3~{R})-3-[4-azanyl-3-(4-hydroxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]propan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C15 J0E sing 173 n n C15 C16 J0E doub 174 n y C15 C14 J0E sing 175 n y C16 C17 J0E sing 176 n y C14 C13 J0E doub 177 n y C17 C12 J0E doub 178 n y C13 C12 J0E sing 179 n y C12 C11 J0E sing 180 n n C9 C8 J0E sing 181 n n C11 N3 J0E doub 182 n y C11 C1 J0E sing 183 n y N3 N1 J0E sing 184 n y C10 N2 J0E sing 185 n n C10 C3 J0E sing 186 n n C6 N2 J0E sing 187 n n C6 C5 J0E sing 188 n n C8 C7 J0E sing 189 n n N2 C7 J0E sing 190 n n C7 O J0E doub 191 n n N C J0E sing 192 n n C1 C J0E doub 193 n y C1 C2 J0E sing 194 n y N1 C3 J0E sing 195 n n N1 C2 J0E sing 196 n y C3 C4 J0E sing 197 n n C4 C5 J0E sing 198 n n C N5 J0E sing 199 n y C2 N4 J0E doub 200 n y N5 C18 J0E doub 201 n y N4 C18 J0E sing 202 n y C3 H1 J0E sing 203 n n C5 H2 J0E sing 204 n n C5 H3 J0E sing 205 n n C6 H4 J0E sing 206 n n C6 H5 J0E sing 207 n n C8 H6 J0E sing 208 n n C8 H7 J0E sing 209 n n C13 H8 J0E sing 210 n n C14 H9 J0E sing 211 n n C16 H10 J0E sing 212 n n C17 H11 J0E sing 213 n n C18 H12 J0E sing 214 n n N H13 J0E sing 215 n n N H14 J0E sing 216 n n C10 H15 J0E sing 217 n n C10 H16 J0E sing 218 n n C4 H17 J0E sing 219 n n C4 H18 J0E sing 220 n n C9 H19 J0E sing 221 n n C9 H20 J0E sing 222 n n C9 H21 J0E sing 223 n n O1 H22 J0E sing 224 n n # _atom_sites.entry_id 6QG4 _atom_sites.fract_transf_matrix[1][1] 0.016611 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014925 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011614 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J0E A 1 501 1 J0E 724 . C 3 HOH A 1 601 28 HOH HOH . C 3 HOH A 2 602 22 HOH HOH . C 3 HOH A 3 603 31 HOH HOH . C 3 HOH A 4 604 17 HOH HOH . C 3 HOH A 5 605 26 HOH HOH . C 3 HOH A 6 606 38 HOH HOH . C 3 HOH A 7 607 9 HOH HOH . C 3 HOH A 8 608 33 HOH HOH . C 3 HOH A 9 609 29 HOH HOH . C 3 HOH A 10 610 1 HOH HOH . C 3 HOH A 11 611 15 HOH HOH . C 3 HOH A 12 612 34 HOH HOH . C 3 HOH A 13 613 23 HOH HOH . C 3 HOH A 14 614 24 HOH HOH . C 3 HOH A 15 615 25 HOH HOH . C 3 HOH A 16 616 19 HOH HOH . C 3 HOH A 17 617 5 HOH HOH . C 3 HOH A 18 618 11 HOH HOH . C 3 HOH A 19 619 20 HOH HOH . C 3 HOH A 20 620 16 HOH HOH . C 3 HOH A 21 621 13 HOH HOH . C 3 HOH A 22 622 21 HOH HOH . C 3 HOH A 23 623 4 HOH HOH . C 3 HOH A 24 624 7 HOH HOH . C 3 HOH A 25 625 8 HOH HOH . C 3 HOH A 26 626 39 HOH HOH . C 3 HOH A 27 627 36 HOH HOH . C 3 HOH A 28 628 18 HOH HOH . C 3 HOH A 29 629 40 HOH HOH . C 3 HOH A 30 630 2 HOH HOH . C 3 HOH A 31 631 10 HOH HOH . C 3 HOH A 32 632 32 HOH HOH . C 3 HOH A 33 633 6 HOH HOH . C 3 HOH A 34 634 41 HOH HOH . C 3 HOH A 35 635 27 HOH HOH . C 3 HOH A 36 636 14 HOH HOH . C 3 HOH A 37 637 12 HOH HOH . C 3 HOH A 38 638 30 HOH HOH . C 3 HOH A 39 639 3 HOH HOH . C 3 HOH A 40 640 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 J0E . . . B 2 -25.081 9.343 -5.278 1 56.08 ? N1 J0E 501 A 1 HETATM 2 N N2 J0E . . . B 2 -24.988 12.95 -6.035 1 67.06 ? N2 J0E 501 A 1 HETATM 3 C C3 J0E . . . B 2 -25.291 10.798 -5.077 1 75.03 ? C3 J0E 501 A 1 HETATM 4 N N4 J0E . . . B 2 -23.948 8.325 -3.306 1 64.01 ? N4 J0E 501 A 1 HETATM 5 C C5 J0E . . . B 2 -27.049 12.587 -4.95 1 79.48 ? C5 J0E 501 A 1 HETATM 6 C C6 J0E . . . B 2 -26.398 13.296 -6.13 1 76.67 ? C6 J0E 501 A 1 HETATM 7 C C8 J0E . . . B 2 -22.656 13.47 -6.05 1 61.8 ? C8 J0E 501 A 1 HETATM 8 C C11 J0E . . . B 2 -25.315 7.535 -6.591 1 63.36 ? C11 J0E 501 A 1 HETATM 9 C C12 J0E . . . B 2 -25.661 6.654 -7.74 1 64.88 ? C12 J0E 501 A 1 HETATM 10 C C13 J0E . . . B 2 -26.962 6.633 -8.227 1 67.9 ? C13 J0E 501 A 1 HETATM 11 C C14 J0E . . . B 2 -27.285 5.816 -9.303 1 65.22 ? C14 J0E 501 A 1 HETATM 12 C C15 J0E . . . B 2 -26.309 5.022 -9.893 1 76.09 ? C15 J0E 501 A 1 HETATM 13 C C16 J0E . . . B 2 -25.008 5.043 -9.407 1 76.32 ? C16 J0E 501 A 1 HETATM 14 C C17 J0E . . . B 2 -24.683 5.862 -8.331 1 67.86 ? C17 J0E 501 A 1 HETATM 15 C C18 J0E . . . B 2 -23.478 7.16 -2.824 1 69.88 ? C18 J0E 501 A 1 HETATM 16 N N J0E . . . B 2 -24.156 4.721 -5.378 1 50.88 ? N J0E 501 A 1 HETATM 17 C C J0E . . . B 2 -24.099 5.905 -4.721 1 58.56 ? C J0E 501 A 1 HETATM 18 O O J0E . . . B 2 -24.308 14.963 -5.322 1 78.89 ? O J0E 501 A 1 HETATM 19 C C1 J0E . . . B 2 -24.64 7.147 -5.322 1 63.83 ? C1 J0E 501 A 1 HETATM 20 C C10 J0E . . . B 2 -24.677 11.545 -6.256 1 69.3 ? C10 J0E 501 A 1 HETATM 21 C C2 J0E . . . B 2 -24.529 8.384 -4.528 1 63.81 ? C2 J0E 501 A 1 HETATM 22 C C4 J0E . . . B 2 -26.787 11.087 -5.014 1 76.27 ? C4 J0E 501 A 1 HETATM 23 C C7 J0E . . . B 2 -24.051 13.856 -5.768 1 63.71 ? C7 J0E 501 A 1 HETATM 24 C C9 J0E . . . B 2 -21.847 14.25 -7.079 1 56.33 ? C9 J0E 501 A 1 HETATM 25 N N3 J0E . . . B 2 -25.556 8.865 -6.513 1 65.9 ? N3 J0E 501 A 1 HETATM 26 N N5 J0E . . . B 2 -23.543 5.993 -3.492 1 57.96 ? N5 J0E 501 A 1 HETATM 27 O O1 J0E . . . B 2 -26.632 4.221 -10.945 1 64.56 ? O1 J0E 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 27 #