data_6QGK # _model_server_result.job_id w6fr1QcjvU3qlRABbMLVvQ _model_server_result.datetime_utc '2024-12-01 06:56:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qgk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6QGK # _exptl.entry_id 6QGK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 501.663 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2-[[(3~{S})-3-(aminomethyl)-3,4-dihydro-1~{H}-isoquinolin-2-yl]carbonyl]phenyl]-~{N},~{N}-dibutyl-5-methyl-pyrazole-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QGK _cell.length_a 47.57 _cell.length_b 50.104 _cell.length_c 65.371 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QGK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H39 N5 O2' _chem_comp.formula_weight 501.663 _chem_comp.id J1Q _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2-[[(3~{S})-3-(aminomethyl)-3,4-dihydro-1~{H}-isoquinolin-2-yl]carbonyl]phenyl]-~{N},~{N}-dibutyl-5-methyl-pyrazole-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C15 J1Q doub 179 n y C16 C17 J1Q sing 180 n y C15 C14 J1Q sing 181 n y C17 C12 J1Q doub 182 n y C7 C6 J1Q sing 183 n n C7 N1 J1Q sing 184 n n C14 C13 J1Q doub 185 n y C4 C6 J1Q doub 186 n y C4 C3 J1Q sing 187 n y C12 C13 J1Q sing 188 n y C12 C11 J1Q sing 189 n n N2 C9 J1Q sing 190 n n C6 C5 J1Q sing 191 n y C3 C2 J1Q doub 192 n y C13 N3 J1Q sing 193 n n N1 C11 J1Q sing 194 n n N1 C8 J1Q sing 195 n n C9 C8 J1Q sing 196 n n C11 O1 J1Q doub 197 n n C8 C10 J1Q sing 198 n n C30 C29 J1Q sing 199 n n C2 C1 J1Q sing 200 n y C5 C1 J1Q doub 201 n y C5 C10 J1Q sing 202 n n N3 N4 J1Q sing 203 n y N3 C20 J1Q sing 204 n y N4 C18 J1Q doub 205 n y C21 C20 J1Q sing 206 n n C29 C28 J1Q sing 207 n n C20 C19 J1Q doub 208 n y C28 C27 J1Q sing 209 n n C18 C19 J1Q sing 210 n y C18 C22 J1Q sing 211 n n C27 N5 J1Q sing 212 n n C22 N5 J1Q sing 213 n n C22 O2 J1Q doub 214 n n N5 C23 J1Q sing 215 n n C23 C24 J1Q sing 216 n n C24 C25 J1Q sing 217 n n C25 C26 J1Q sing 218 n n C30 H1 J1Q sing 219 n n C30 H2 J1Q sing 220 n n C30 H3 J1Q sing 221 n n C29 H4 J1Q sing 222 n n C29 H5 J1Q sing 223 n n C28 H6 J1Q sing 224 n n C28 H7 J1Q sing 225 n n C27 H8 J1Q sing 226 n n C27 H9 J1Q sing 227 n n C23 H10 J1Q sing 228 n n C23 H11 J1Q sing 229 n n C24 H12 J1Q sing 230 n n C24 H13 J1Q sing 231 n n C25 H14 J1Q sing 232 n n C25 H15 J1Q sing 233 n n C26 H16 J1Q sing 234 n n C26 H17 J1Q sing 235 n n C26 H18 J1Q sing 236 n n C19 H19 J1Q sing 237 n n C21 H20 J1Q sing 238 n n C21 H21 J1Q sing 239 n n C21 H22 J1Q sing 240 n n C14 H23 J1Q sing 241 n n C15 H24 J1Q sing 242 n n C16 H25 J1Q sing 243 n n C17 H26 J1Q sing 244 n n C7 H27 J1Q sing 245 n n C7 H28 J1Q sing 246 n n C4 H29 J1Q sing 247 n n C3 H30 J1Q sing 248 n n C2 H31 J1Q sing 249 n n C1 H32 J1Q sing 250 n n C10 H33 J1Q sing 251 n n C10 H34 J1Q sing 252 n n C8 H35 J1Q sing 253 n n C9 H36 J1Q sing 254 n n C9 H37 J1Q sing 255 n n N2 H38 J1Q sing 256 n n N2 H39 J1Q sing 257 n n # _atom_sites.entry_id 6QGK _atom_sites.fract_transf_matrix[1][1] 0.021022 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019958 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015297 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J1Q A 1 401 401 J1Q UNK . C 3 ACT A 1 402 1 ACT ACT . D 4 HOH A 1 501 67 HOH HOH . D 4 HOH A 2 502 150 HOH HOH . D 4 HOH A 3 503 156 HOH HOH . D 4 HOH A 4 504 93 HOH HOH . D 4 HOH A 5 505 29 HOH HOH . D 4 HOH A 6 506 76 HOH HOH . D 4 HOH A 7 507 25 HOH HOH . D 4 HOH A 8 508 40 HOH HOH . D 4 HOH A 9 509 42 HOH HOH . D 4 HOH A 10 510 111 HOH HOH . D 4 HOH A 11 511 91 HOH HOH . D 4 HOH A 12 512 11 HOH HOH . D 4 HOH A 13 513 118 HOH HOH . D 4 HOH A 14 514 85 HOH HOH . D 4 HOH A 15 515 55 HOH HOH . D 4 HOH A 16 516 113 HOH HOH . D 4 HOH A 17 517 2 HOH HOH . D 4 HOH A 18 518 89 HOH HOH . D 4 HOH A 19 519 77 HOH HOH . D 4 HOH A 20 520 90 HOH HOH . D 4 HOH A 21 521 133 HOH HOH . D 4 HOH A 22 522 79 HOH HOH . D 4 HOH A 23 523 120 HOH HOH . D 4 HOH A 24 524 35 HOH HOH . D 4 HOH A 25 525 122 HOH HOH . D 4 HOH A 26 526 30 HOH HOH . D 4 HOH A 27 527 13 HOH HOH . D 4 HOH A 28 528 141 HOH HOH . D 4 HOH A 29 529 94 HOH HOH . D 4 HOH A 30 530 96 HOH HOH . D 4 HOH A 31 531 14 HOH HOH . D 4 HOH A 32 532 7 HOH HOH . D 4 HOH A 33 533 4 HOH HOH . D 4 HOH A 34 534 78 HOH HOH . D 4 HOH A 35 535 19 HOH HOH . D 4 HOH A 36 536 95 HOH HOH . D 4 HOH A 37 537 10 HOH HOH . D 4 HOH A 38 538 116 HOH HOH . D 4 HOH A 39 539 22 HOH HOH . D 4 HOH A 40 540 18 HOH HOH . D 4 HOH A 41 541 88 HOH HOH . D 4 HOH A 42 542 8 HOH HOH . D 4 HOH A 43 543 83 HOH HOH . D 4 HOH A 44 544 100 HOH HOH . D 4 HOH A 45 545 59 HOH HOH . D 4 HOH A 46 546 142 HOH HOH . D 4 HOH A 47 547 101 HOH HOH . D 4 HOH A 48 548 75 HOH HOH . D 4 HOH A 49 549 51 HOH HOH . D 4 HOH A 50 550 37 HOH HOH . D 4 HOH A 51 551 6 HOH HOH . D 4 HOH A 52 552 33 HOH HOH . D 4 HOH A 53 553 20 HOH HOH . D 4 HOH A 54 554 36 HOH HOH . D 4 HOH A 55 555 1 HOH HOH . D 4 HOH A 56 556 65 HOH HOH . D 4 HOH A 57 557 23 HOH HOH . D 4 HOH A 58 558 68 HOH HOH . D 4 HOH A 59 559 139 HOH HOH . D 4 HOH A 60 560 24 HOH HOH . D 4 HOH A 61 561 26 HOH HOH . D 4 HOH A 62 562 60 HOH HOH . D 4 HOH A 63 563 80 HOH HOH . D 4 HOH A 64 564 134 HOH HOH . D 4 HOH A 65 565 31 HOH HOH . D 4 HOH A 66 566 12 HOH HOH . D 4 HOH A 67 567 84 HOH HOH . D 4 HOH A 68 568 57 HOH HOH . D 4 HOH A 69 569 45 HOH HOH . D 4 HOH A 70 570 43 HOH HOH . D 4 HOH A 71 571 28 HOH HOH . D 4 HOH A 72 572 5 HOH HOH . D 4 HOH A 73 573 15 HOH HOH . D 4 HOH A 74 574 69 HOH HOH . D 4 HOH A 75 575 153 HOH HOH . D 4 HOH A 76 576 32 HOH HOH . D 4 HOH A 77 577 82 HOH HOH . D 4 HOH A 78 578 71 HOH HOH . D 4 HOH A 79 579 123 HOH HOH . D 4 HOH A 80 580 144 HOH HOH . D 4 HOH A 81 581 21 HOH HOH . D 4 HOH A 82 582 117 HOH HOH . D 4 HOH A 83 583 46 HOH HOH . D 4 HOH A 84 584 148 HOH HOH . D 4 HOH A 85 585 38 HOH HOH . D 4 HOH A 86 586 110 HOH HOH . D 4 HOH A 87 587 9 HOH HOH . D 4 HOH A 88 588 106 HOH HOH . D 4 HOH A 89 589 61 HOH HOH . D 4 HOH A 90 590 66 HOH HOH . D 4 HOH A 91 591 54 HOH HOH . D 4 HOH A 92 592 124 HOH HOH . D 4 HOH A 93 593 70 HOH HOH . D 4 HOH A 94 594 81 HOH HOH . D 4 HOH A 95 595 130 HOH HOH . D 4 HOH A 96 596 53 HOH HOH . D 4 HOH A 97 597 27 HOH HOH . D 4 HOH A 98 598 147 HOH HOH . D 4 HOH A 99 599 92 HOH HOH . D 4 HOH A 100 600 72 HOH HOH . D 4 HOH A 101 601 39 HOH HOH . D 4 HOH A 102 602 105 HOH HOH . D 4 HOH A 103 603 86 HOH HOH . D 4 HOH A 104 604 62 HOH HOH . D 4 HOH A 105 605 128 HOH HOH . D 4 HOH A 106 606 129 HOH HOH . D 4 HOH A 107 607 47 HOH HOH . D 4 HOH A 108 608 138 HOH HOH . D 4 HOH A 109 609 108 HOH HOH . D 4 HOH A 110 610 98 HOH HOH . D 4 HOH A 111 611 50 HOH HOH . D 4 HOH A 112 612 56 HOH HOH . D 4 HOH A 113 613 115 HOH HOH . D 4 HOH A 114 614 127 HOH HOH . D 4 HOH A 115 615 52 HOH HOH . D 4 HOH A 116 616 137 HOH HOH . D 4 HOH A 117 617 74 HOH HOH . D 4 HOH A 118 618 64 HOH HOH . D 4 HOH A 119 619 103 HOH HOH . D 4 HOH A 120 620 143 HOH HOH . D 4 HOH A 121 621 132 HOH HOH . D 4 HOH A 122 622 44 HOH HOH . D 4 HOH A 123 623 136 HOH HOH . D 4 HOH A 124 624 97 HOH HOH . D 4 HOH A 125 625 102 HOH HOH . D 4 HOH A 126 626 16 HOH HOH . D 4 HOH A 127 627 104 HOH HOH . D 4 HOH A 128 628 151 HOH HOH . D 4 HOH A 129 629 3 HOH HOH . D 4 HOH A 130 630 145 HOH HOH . D 4 HOH A 131 631 109 HOH HOH . D 4 HOH A 132 632 99 HOH HOH . D 4 HOH A 133 633 41 HOH HOH . D 4 HOH A 134 634 34 HOH HOH . D 4 HOH A 135 635 48 HOH HOH . D 4 HOH A 136 636 114 HOH HOH . D 4 HOH A 137 637 107 HOH HOH . D 4 HOH A 138 638 58 HOH HOH . D 4 HOH A 139 639 112 HOH HOH . D 4 HOH A 140 640 17 HOH HOH . D 4 HOH A 141 641 87 HOH HOH . D 4 HOH A 142 642 121 HOH HOH . D 4 HOH A 143 643 63 HOH HOH . D 4 HOH A 144 644 119 HOH HOH . D 4 HOH A 145 645 140 HOH HOH . D 4 HOH A 146 646 125 HOH HOH . D 4 HOH A 147 647 135 HOH HOH . D 4 HOH A 148 648 73 HOH HOH . D 4 HOH A 149 649 149 HOH HOH . D 4 HOH A 150 650 155 HOH HOH . D 4 HOH A 151 651 154 HOH HOH . D 4 HOH A 152 652 131 HOH HOH . D 4 HOH A 153 653 49 HOH HOH . D 4 HOH A 154 654 146 HOH HOH . D 4 HOH A 155 655 152 HOH HOH . D 4 HOH A 156 656 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C30 J1Q . . . B 2 -2.285 -2.456 16.89 1 24.01 ? C30 J1Q 401 A 1 HETATM 2 C C29 J1Q . . . B 2 -2.288 -1.703 18.163 1 22.16 ? C29 J1Q 401 A 1 HETATM 3 C C28 J1Q . . . B 2 -0.879 -1.595 18.673 1 21.09 ? C28 J1Q 401 A 1 HETATM 4 C C27 J1Q . . . B 2 -0.887 -0.594 19.79 1 22.6 ? C27 J1Q 401 A 1 HETATM 5 N N5 J1Q . . . B 2 0.487 -0.456 20.433 1 22.98 ? N5 J1Q 401 A 1 HETATM 6 C C23 J1Q . . . B 2 1.036 -1.58 21.244 1 23.36 ? C23 J1Q 401 A 1 HETATM 7 C C24 J1Q . . . B 2 0.637 -1.5 22.721 1 26.52 ? C24 J1Q 401 A 1 HETATM 8 C C25 J1Q . . . B 2 1.412 -2.589 23.543 1 28.94 ? C25 J1Q 401 A 1 HETATM 9 C C26 J1Q . . . B 2 1.014 -2.434 25.012 1 34.35 ? C26 J1Q 401 A 1 HETATM 10 C C22 J1Q . . . B 2 1.184 0.674 20.288 1 22.73 ? C22 J1Q 401 A 1 HETATM 11 O O2 J1Q . . . B 2 2.263 0.883 20.837 1 23.63 ? O2 J1Q 401 A 1 HETATM 12 C C18 J1Q . . . B 2 0.793 1.752 19.347 1 21.19 ? C18 J1Q 401 A 1 HETATM 13 N N4 J1Q . . . B 2 0.635 1.515 18.083 1 20.61 ? N4 J1Q 401 A 1 HETATM 14 C C19 J1Q . . . B 2 0.577 3.1 19.625 1 22.83 ? C19 J1Q 401 A 1 HETATM 15 C C20 J1Q . . . B 2 0.312 3.666 18.382 1 21.12 ? C20 J1Q 401 A 1 HETATM 16 C C21 J1Q . . . B 2 -0.027 5.086 18.089 1 20.66 ? C21 J1Q 401 A 1 HETATM 17 N N3 J1Q . . . B 2 0.347 2.662 17.477 1 21.59 ? N3 J1Q 401 A 1 HETATM 18 C C13 J1Q . . . B 2 0.252 2.752 16.021 1 20.31 ? C13 J1Q 401 A 1 HETATM 19 C C14 J1Q . . . B 2 -0.829 3.217 15.31 1 19.24 ? C14 J1Q 401 A 1 HETATM 20 C C15 J1Q . . . B 2 -0.715 3.288 13.973 1 19.6 ? C15 J1Q 401 A 1 HETATM 21 C C16 J1Q . . . B 2 0.407 2.832 13.294 1 18.52 ? C16 J1Q 401 A 1 HETATM 22 C C17 J1Q . . . B 2 1.49 2.338 14.04 1 18.18 ? C17 J1Q 401 A 1 HETATM 23 C C12 J1Q . . . B 2 1.407 2.346 15.392 1 19.3 ? C12 J1Q 401 A 1 HETATM 24 C C11 J1Q . . . B 2 2.582 1.815 16.216 1 19.33 ? C11 J1Q 401 A 1 HETATM 25 O O1 J1Q . . . B 2 3.174 2.579 17.014 1 20.43 ? O1 J1Q 401 A 1 HETATM 26 N N1 J1Q . . . B 2 3.004 0.561 16.032 1 18.06 ? N1 J1Q 401 A 1 HETATM 27 C C7 J1Q . . . B 2 2.256 -0.427 15.23 1 17.05 ? C7 J1Q 401 A 1 HETATM 28 C C6 J1Q . . . B 2 2.067 -1.757 15.927 1 16.84 ? C6 J1Q 401 A 1 HETATM 29 C C4 J1Q . . . B 2 1.285 -2.72 15.32 1 19.2 ? C4 J1Q 401 A 1 HETATM 30 C C3 J1Q . . . B 2 1.105 -3.947 15.932 1 18.95 ? C3 J1Q 401 A 1 HETATM 31 C C2 J1Q . . . B 2 1.738 -4.208 17.125 1 17.49 ? C2 J1Q 401 A 1 HETATM 32 C C1 J1Q . . . B 2 2.488 -3.267 17.783 1 18.77 ? C1 J1Q 401 A 1 HETATM 33 C C5 J1Q . . . B 2 2.672 -2.026 17.135 1 17.92 ? C5 J1Q 401 A 1 HETATM 34 C C10 J1Q . . . B 2 3.495 -0.974 17.795 1 18.75 ? C10 J1Q 401 A 1 HETATM 35 C C8 J1Q . . . B 2 4.098 0.018 16.838 1 18.39 ? C8 J1Q 401 A 1 HETATM 36 C C9 J1Q . . . B 2 5.21 -0.657 16.055 1 21.48 ? C9 J1Q 401 A 1 HETATM 37 N N2 J1Q . . . B 2 6.01 0.379 15.404 1 24.74 ? N2 J1Q 401 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 790 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 37 #