data_6QGQ # _model_server_result.job_id rQzGOthNO7O5E_OeMkb-iw _model_server_result.datetime_utc '2024-11-21 13:46:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qgq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 6QGQ # _exptl.entry_id 6QGQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QGQ _cell.length_a 146.138 _cell.length_b 160.738 _cell.length_c 40.679 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QGQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,K 1 1 B,G,L 2 1 C,H,M 3 1 D,I,J,N 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6QGQ _atom_sites.fract_transf_matrix[1][1] 0.006843 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006221 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024583 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 301 301 GOL GOL . F 3 GOL A 1 302 301 GOL GOL . G 4 PLM B 1 401 401 PLM PLM . H 3 GOL C 1 601 601 GOL GOL . I 3 GOL D 1 301 301 GOL GOL . J 4 PLM D 1 302 401 PLM MYR . K 5 HOH A 1 401 18 HOH HOH . K 5 HOH A 2 402 66 HOH HOH . K 5 HOH A 3 403 127 HOH HOH . K 5 HOH A 4 404 50 HOH HOH . K 5 HOH A 5 405 5 HOH HOH . K 5 HOH A 6 406 78 HOH HOH . K 5 HOH A 7 407 87 HOH HOH . K 5 HOH A 8 408 67 HOH HOH . K 5 HOH A 9 409 40 HOH HOH . K 5 HOH A 10 410 20 HOH HOH . K 5 HOH A 11 411 11 HOH HOH . K 5 HOH A 12 412 81 HOH HOH . K 5 HOH A 13 413 16 HOH HOH . K 5 HOH A 14 414 27 HOH HOH . K 5 HOH A 15 415 19 HOH HOH . K 5 HOH A 16 416 2 HOH HOH . K 5 HOH A 17 417 28 HOH HOH . K 5 HOH A 18 418 106 HOH HOH . K 5 HOH A 19 419 74 HOH HOH . K 5 HOH A 20 420 90 HOH HOH . K 5 HOH A 21 421 41 HOH HOH . K 5 HOH A 22 422 85 HOH HOH . K 5 HOH A 23 423 71 HOH HOH . K 5 HOH A 24 424 39 HOH HOH . K 5 HOH A 25 425 107 HOH HOH . K 5 HOH A 26 426 46 HOH HOH . K 5 HOH A 27 427 47 HOH HOH . K 5 HOH A 28 428 113 HOH HOH . K 5 HOH A 29 429 77 HOH HOH . K 5 HOH A 30 430 129 HOH HOH . K 5 HOH A 31 431 83 HOH HOH . K 5 HOH A 32 432 95 HOH HOH . L 5 HOH B 1 501 68 HOH HOH . L 5 HOH B 2 502 48 HOH HOH . L 5 HOH B 3 503 108 HOH HOH . L 5 HOH B 4 504 4 HOH HOH . L 5 HOH B 5 505 130 HOH HOH . L 5 HOH B 6 506 22 HOH HOH . L 5 HOH B 7 507 72 HOH HOH . L 5 HOH B 8 508 26 HOH HOH . L 5 HOH B 9 509 13 HOH HOH . L 5 HOH B 10 510 103 HOH HOH . L 5 HOH B 11 511 84 HOH HOH . L 5 HOH B 12 512 15 HOH HOH . L 5 HOH B 13 513 23 HOH HOH . L 5 HOH B 14 514 25 HOH HOH . L 5 HOH B 15 515 119 HOH HOH . L 5 HOH B 16 516 91 HOH HOH . L 5 HOH B 17 517 97 HOH HOH . L 5 HOH B 18 518 49 HOH HOH . L 5 HOH B 19 519 37 HOH HOH . L 5 HOH B 20 520 76 HOH HOH . L 5 HOH B 21 521 54 HOH HOH . L 5 HOH B 22 522 100 HOH HOH . L 5 HOH B 23 523 96 HOH HOH . L 5 HOH B 24 524 89 HOH HOH . L 5 HOH B 25 525 73 HOH HOH . L 5 HOH B 26 526 104 HOH HOH . L 5 HOH B 27 527 70 HOH HOH . L 5 HOH B 28 528 123 HOH HOH . L 5 HOH B 29 529 132 HOH HOH . L 5 HOH B 30 530 33 HOH HOH . L 5 HOH B 31 531 112 HOH HOH . L 5 HOH B 32 532 105 HOH HOH . M 5 HOH C 1 701 93 HOH HOH . M 5 HOH C 2 702 116 HOH HOH . M 5 HOH C 3 703 55 HOH HOH . M 5 HOH C 4 704 75 HOH HOH . M 5 HOH C 5 705 9 HOH HOH . M 5 HOH C 6 706 12 HOH HOH . M 5 HOH C 7 707 21 HOH HOH . M 5 HOH C 8 708 14 HOH HOH . M 5 HOH C 9 709 69 HOH HOH . M 5 HOH C 10 710 44 HOH HOH . M 5 HOH C 11 711 117 HOH HOH . M 5 HOH C 12 712 8 HOH HOH . M 5 HOH C 13 713 32 HOH HOH . M 5 HOH C 14 714 121 HOH HOH . M 5 HOH C 15 715 24 HOH HOH . M 5 HOH C 16 716 57 HOH HOH . M 5 HOH C 17 717 109 HOH HOH . M 5 HOH C 18 718 10 HOH HOH . M 5 HOH C 19 719 80 HOH HOH . M 5 HOH C 20 720 64 HOH HOH . M 5 HOH C 21 721 120 HOH HOH . M 5 HOH C 22 722 61 HOH HOH . M 5 HOH C 23 723 125 HOH HOH . M 5 HOH C 24 724 34 HOH HOH . M 5 HOH C 25 725 86 HOH HOH . M 5 HOH C 26 726 3 HOH HOH . M 5 HOH C 27 727 99 HOH HOH . M 5 HOH C 28 728 58 HOH HOH . M 5 HOH C 29 729 53 HOH HOH . M 5 HOH C 30 730 111 HOH HOH . M 5 HOH C 31 731 56 HOH HOH . M 5 HOH C 32 732 102 HOH HOH . M 5 HOH C 33 733 52 HOH HOH . M 5 HOH C 34 734 92 HOH HOH . M 5 HOH C 35 735 126 HOH HOH . M 5 HOH C 36 736 110 HOH HOH . M 5 HOH C 37 737 79 HOH HOH . N 5 HOH D 1 401 36 HOH HOH . N 5 HOH D 2 402 88 HOH HOH . N 5 HOH D 3 403 42 HOH HOH . N 5 HOH D 4 404 122 HOH HOH . N 5 HOH D 5 405 59 HOH HOH . N 5 HOH D 6 406 6 HOH HOH . N 5 HOH D 7 407 1 HOH HOH . N 5 HOH D 8 408 65 HOH HOH . N 5 HOH D 9 409 131 HOH HOH . N 5 HOH D 10 410 7 HOH HOH . N 5 HOH D 11 411 45 HOH HOH . N 5 HOH D 12 412 98 HOH HOH . N 5 HOH D 13 413 29 HOH HOH . N 5 HOH D 14 414 60 HOH HOH . N 5 HOH D 15 415 30 HOH HOH . N 5 HOH D 16 416 51 HOH HOH . N 5 HOH D 17 417 38 HOH HOH . N 5 HOH D 18 418 63 HOH HOH . N 5 HOH D 19 419 115 HOH HOH . N 5 HOH D 20 420 17 HOH HOH . N 5 HOH D 21 421 94 HOH HOH . N 5 HOH D 22 422 128 HOH HOH . N 5 HOH D 23 423 35 HOH HOH . N 5 HOH D 24 424 101 HOH HOH . N 5 HOH D 25 425 43 HOH HOH . N 5 HOH D 26 426 62 HOH HOH . N 5 HOH D 27 427 114 HOH HOH . N 5 HOH D 28 428 118 HOH HOH . N 5 HOH D 29 429 82 HOH HOH . N 5 HOH D 30 430 31 HOH HOH . N 5 HOH D 31 431 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 -31.242 42.828 28.061 1 55.61 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . E 3 -32.443 43.531 27.898 1 59.02 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . E 3 -30.141 43.758 27.543 1 64.4 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . E 3 -28.998 43.699 28.335 1 69.98 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . E 3 -29.871 43.293 26.11 1 49.76 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . E 3 -29.113 44.302 25.507 1 47.88 ? O3 GOL 301 A 1 HETATM 7 H H11 GOL . . . E 3 -31.064 42.593 28.985 1 66.74 ? H11 GOL 301 A 1 HETATM 8 H H12 GOL . . . E 3 -31.223 41.993 27.567 1 66.74 ? H12 GOL 301 A 1 HETATM 9 H HO1 GOL . . . E 3 -32.421 44.176 28.451 1 70.82 ? HO1 GOL 301 A 1 HETATM 10 H H2 GOL . . . E 3 -30.437 44.681 27.562 1 77.28 ? H2 GOL 301 A 1 HETATM 11 H HO2 GOL . . . E 3 -28.534 44.393 28.176 1 83.98 ? HO2 GOL 301 A 1 HETATM 12 H H31 GOL . . . E 3 -29.422 42.434 26.134 1 59.71 ? H31 GOL 301 A 1 HETATM 13 H H32 GOL . . . E 3 -30.718 43.128 25.665 1 59.71 ? H32 GOL 301 A 1 HETATM 14 H HO3 GOL . . . E 3 -28.493 44.5 26.053 1 57.46 ? HO3 GOL 301 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 14 #