data_6QHO # _model_server_result.job_id AUnpxKSLXRxqLvvhPJ9-sw _model_server_result.datetime_utc '2024-11-15 14:29:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qho # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6QHO # _exptl.entry_id 6QHO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 274.322 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(3~{R})-3-(4-azanylpyrazolo[3,4-d]pyrimidin-1-yl)piperidin-1-yl]propan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QHO _cell.length_a 60.5 _cell.length_b 67.9 _cell.length_c 85.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QHO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 112 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 218 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C12 _struct_conn.ptnr2_label_comp_id J3H _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id J3H _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.754 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C13 H18 N6 O' _chem_comp.formula_weight 274.322 _chem_comp.id J3H _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(3~{R})-3-(4-azanylpyrazolo[3,4-d]pyrimidin-1-yl)piperidin-1-yl]propan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C N1 J3H doub 173 n y C N J3H sing 174 n y N1 C1 J3H sing 175 n y N C3 J3H doub 176 n y C1 C2 J3H doub 177 n y C1 N2 J3H sing 178 n y C3 N4 J3H sing 179 n n C3 C2 J3H sing 180 n y O C10 J3H doub 181 n n C2 C4 J3H sing 182 n y C5 N2 J3H sing 183 n n C5 C6 J3H sing 184 n n C5 C9 J3H sing 185 n n N2 N3 J3H sing 186 n y C7 C6 J3H sing 187 n n C7 C8 J3H sing 188 n n C10 C11 J3H sing 189 n n C10 N5 J3H sing 190 n n C11 C12 J3H sing 191 n n N5 C9 J3H sing 192 n n N5 C8 J3H sing 193 n n C4 N3 J3H doub 194 n y C H1 J3H sing 195 n n C11 H2 J3H sing 196 n n C11 H3 J3H sing 197 n n C12 H4 J3H sing 198 n n C12 H5 J3H sing 199 n n C12 H6 J3H sing 200 n n C4 H7 J3H sing 201 n n C5 H8 J3H sing 202 n n C6 H9 J3H sing 203 n n C6 H10 J3H sing 204 n n C7 H11 J3H sing 205 n n C7 H12 J3H sing 206 n n C8 H13 J3H sing 207 n n C8 H14 J3H sing 208 n n C9 H15 J3H sing 209 n n C9 H16 J3H sing 210 n n N4 H17 J3H sing 211 n n N4 H18 J3H sing 212 n n # _atom_sites.entry_id 6QHO _atom_sites.fract_transf_matrix[1][1] 0.016529 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014728 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011696 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J3H A 1 501 1 J3H PYR . C 3 HOH A 1 601 8 HOH HOH . C 3 HOH A 2 602 1 HOH HOH . C 3 HOH A 3 603 11 HOH HOH . C 3 HOH A 4 604 2 HOH HOH . C 3 HOH A 5 605 10 HOH HOH . C 3 HOH A 6 606 6 HOH HOH . C 3 HOH A 7 607 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 J3H . . . B 2 85.1 76.443 4.814 1 57.74 ? C1 J3H 501 A 1 HETATM 2 C C2 J3H . . . B 2 85.284 75.158 5.501 1 58.25 ? C2 J3H 501 A 1 HETATM 3 C C3 J3H . . . B 2 84.666 73.983 4.833 1 57.3 ? C3 J3H 501 A 1 HETATM 4 N N J3H . . . B 2 83.998 74.181 3.672 1 61.33 ? N J3H 501 A 1 HETATM 5 C C J3H . . . B 2 83.878 75.4 3.116 1 62.7 ? C J3H 501 A 1 HETATM 6 O O J3H . . . B 2 85.007 82.82 5.338 1 79.74 ? O J3H 501 A 1 HETATM 7 C C10 J3H . . . B 2 84.605 81.826 5.916 1 64.63 ? C10 J3H 501 A 1 HETATM 8 C C11 J3H . . . B 2 83.127 81.633 6.135 1 59.48 ? C11 J3H 501 A 1 HETATM 9 C C12 J3H . . . B 2 82.622 82.889 6.812 1 64.01 ? C12 J3H 501 A 1 HETATM 10 C C4 J3H . . . B 2 86.048 75.33 6.705 1 59.15 ? C4 J3H 501 A 1 HETATM 11 C C5 J3H . . . B 2 85.945 78.774 5.518 1 63 ? C5 J3H 501 A 1 HETATM 12 C C6 J3H . . . B 2 87.42 79.095 5.732 1 64.36 ? C6 J3H 501 A 1 HETATM 13 C C7 J3H . . . B 2 87.638 80.602 5.722 1 70.82 ? C7 J3H 501 A 1 HETATM 14 C C8 J3H . . . B 2 86.784 81.252 6.799 1 68.54 ? C8 J3H 501 A 1 HETATM 15 C C9 J3H . . . B 2 85.091 79.499 6.558 1 62.96 ? C9 J3H 501 A 1 HETATM 16 N N1 J3H . . . B 2 84.407 76.512 3.654 1 62.18 ? N1 J3H 501 A 1 HETATM 17 N N2 J3H . . . B 2 85.738 77.304 5.61 1 53.67 ? N2 J3H 501 A 1 HETATM 18 N N3 J3H . . . B 2 86.308 76.669 6.74 1 65.35 ? N3 J3H 501 A 1 HETATM 19 N N4 J3H . . . B 2 84.772 72.742 5.367 1 52.1 ? N4 J3H 501 A 1 HETATM 20 N N5 J3H . . . B 2 85.434 80.905 6.398 1 72.76 ? N5 J3H 501 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #