data_6QI2 # _model_server_result.job_id jO42Bfj5wBkL7rkRMp0q-g _model_server_result.datetime_utc '2025-01-25 11:53:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qi2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6QI2 # _exptl.entry_id 6QI2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 76.051 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLYCOLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.73 _cell.angle_gamma 90 _cell.entry_id 6QI2 _cell.length_a 41.38 _cell.length_b 78.61 _cell.length_c 83.53 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QI2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H4 O3' _chem_comp.formula_weight 76.051 _chem_comp.id GOA _chem_comp.mon_nstd_flag . _chem_comp.name 'GLYCOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HYDROXYACETIC ACID;HYDROXYETHANOIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C CA GOA sing 129 n n C O GOA doub 130 n n C OXT GOA sing 131 n n CA O2 GOA sing 132 n n CA H22 GOA sing 133 n n CA H21 GOA sing 134 n n OXT HXT GOA sing 135 n n O2 H20 GOA sing 136 n n # _atom_sites.entry_id 6QI2 _atom_sites.fract_transf_matrix[1][1] 0.024166 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005459 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012273 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOA A 1 401 1 GOA GOA . D 3 HOH A 1 501 490 HOH HOH . D 3 HOH A 2 502 382 HOH HOH . D 3 HOH A 3 503 176 HOH HOH . D 3 HOH A 4 504 165 HOH HOH . D 3 HOH A 5 505 136 HOH HOH . D 3 HOH A 6 506 192 HOH HOH . D 3 HOH A 7 507 106 HOH HOH . D 3 HOH A 8 508 367 HOH HOH . D 3 HOH A 9 509 105 HOH HOH . D 3 HOH A 10 510 93 HOH HOH . D 3 HOH A 11 511 19 HOH HOH . D 3 HOH A 12 512 493 HOH HOH . D 3 HOH A 13 513 47 HOH HOH . D 3 HOH A 14 514 14 HOH HOH . D 3 HOH A 15 515 175 HOH HOH . D 3 HOH A 16 516 122 HOH HOH . D 3 HOH A 17 517 101 HOH HOH . D 3 HOH A 18 518 2 HOH HOH . D 3 HOH A 19 519 4 HOH HOH . D 3 HOH A 20 520 52 HOH HOH . D 3 HOH A 21 521 62 HOH HOH . D 3 HOH A 22 522 220 HOH HOH . D 3 HOH A 23 523 72 HOH HOH . D 3 HOH A 24 524 42 HOH HOH . D 3 HOH A 25 525 55 HOH HOH . D 3 HOH A 26 526 80 HOH HOH . D 3 HOH A 27 527 177 HOH HOH . D 3 HOH A 28 528 13 HOH HOH . D 3 HOH A 29 529 89 HOH HOH . D 3 HOH A 30 530 39 HOH HOH . D 3 HOH A 31 531 452 HOH HOH . D 3 HOH A 32 532 31 HOH HOH . D 3 HOH A 33 533 44 HOH HOH . D 3 HOH A 34 534 225 HOH HOH . D 3 HOH A 35 535 83 HOH HOH . D 3 HOH A 36 536 494 HOH HOH . D 3 HOH A 37 537 46 HOH HOH . D 3 HOH A 38 538 342 HOH HOH . D 3 HOH A 39 539 133 HOH HOH . D 3 HOH A 40 540 33 HOH HOH . D 3 HOH A 41 541 16 HOH HOH . D 3 HOH A 42 542 35 HOH HOH . D 3 HOH A 43 543 50 HOH HOH . D 3 HOH A 44 544 65 HOH HOH . D 3 HOH A 45 545 292 HOH HOH . D 3 HOH A 46 546 74 HOH HOH . D 3 HOH A 47 547 189 HOH HOH . D 3 HOH A 48 548 432 HOH HOH . D 3 HOH A 49 549 256 HOH HOH . D 3 HOH A 50 550 3 HOH HOH . D 3 HOH A 51 551 23 HOH HOH . D 3 HOH A 52 552 68 HOH HOH . D 3 HOH A 53 553 7 HOH HOH . D 3 HOH A 54 554 70 HOH HOH . D 3 HOH A 55 555 170 HOH HOH . D 3 HOH A 56 556 36 HOH HOH . D 3 HOH A 57 557 77 HOH HOH . D 3 HOH A 58 558 245 HOH HOH . D 3 HOH A 59 559 9 HOH HOH . D 3 HOH A 60 560 362 HOH HOH . D 3 HOH A 61 561 73 HOH HOH . D 3 HOH A 62 562 166 HOH HOH . D 3 HOH A 63 563 294 HOH HOH . D 3 HOH A 64 564 38 HOH HOH . D 3 HOH A 65 565 20 HOH HOH . D 3 HOH A 66 566 104 HOH HOH . D 3 HOH A 67 567 215 HOH HOH . D 3 HOH A 68 568 43 HOH HOH . D 3 HOH A 69 569 60 HOH HOH . D 3 HOH A 70 570 308 HOH HOH . D 3 HOH A 71 571 242 HOH HOH . D 3 HOH A 72 572 26 HOH HOH . D 3 HOH A 73 573 183 HOH HOH . D 3 HOH A 74 574 76 HOH HOH . D 3 HOH A 75 575 75 HOH HOH . D 3 HOH A 76 576 387 HOH HOH . D 3 HOH A 77 577 325 HOH HOH . D 3 HOH A 78 578 15 HOH HOH . D 3 HOH A 79 579 249 HOH HOH . D 3 HOH A 80 580 131 HOH HOH . D 3 HOH A 81 581 246 HOH HOH . D 3 HOH A 82 582 444 HOH HOH . D 3 HOH A 83 583 97 HOH HOH . D 3 HOH A 84 584 64 HOH HOH . D 3 HOH A 85 585 206 HOH HOH . D 3 HOH A 86 586 278 HOH HOH . D 3 HOH A 87 587 127 HOH HOH . D 3 HOH A 88 588 388 HOH HOH . D 3 HOH A 89 589 152 HOH HOH . D 3 HOH A 90 590 347 HOH HOH . D 3 HOH A 91 591 144 HOH HOH . D 3 HOH A 92 592 356 HOH HOH . D 3 HOH A 93 593 269 HOH HOH . D 3 HOH A 94 594 338 HOH HOH . D 3 HOH A 95 595 167 HOH HOH . E 3 HOH B 1 401 231 HOH HOH . E 3 HOH B 2 402 140 HOH HOH . E 3 HOH B 3 403 115 HOH HOH . E 3 HOH B 4 404 149 HOH HOH . E 3 HOH B 5 405 5 HOH HOH . E 3 HOH B 6 406 141 HOH HOH . E 3 HOH B 7 407 110 HOH HOH . E 3 HOH B 8 408 119 HOH HOH . E 3 HOH B 9 409 24 HOH HOH . E 3 HOH B 10 410 279 HOH HOH . E 3 HOH B 11 411 56 HOH HOH . E 3 HOH B 12 412 264 HOH HOH . E 3 HOH B 13 413 114 HOH HOH . E 3 HOH B 14 414 67 HOH HOH . E 3 HOH B 15 415 90 HOH HOH . E 3 HOH B 16 416 81 HOH HOH . E 3 HOH B 17 417 345 HOH HOH . E 3 HOH B 18 418 226 HOH HOH . E 3 HOH B 19 419 41 HOH HOH . E 3 HOH B 20 420 85 HOH HOH . E 3 HOH B 21 421 235 HOH HOH . E 3 HOH B 22 422 71 HOH HOH . E 3 HOH B 23 423 17 HOH HOH . E 3 HOH B 24 424 87 HOH HOH . E 3 HOH B 25 425 8 HOH HOH . E 3 HOH B 26 426 28 HOH HOH . E 3 HOH B 27 427 12 HOH HOH . E 3 HOH B 28 428 109 HOH HOH . E 3 HOH B 29 429 30 HOH HOH . E 3 HOH B 30 430 49 HOH HOH . E 3 HOH B 31 431 123 HOH HOH . E 3 HOH B 32 432 37 HOH HOH . E 3 HOH B 33 433 57 HOH HOH . E 3 HOH B 34 434 6 HOH HOH . E 3 HOH B 35 435 21 HOH HOH . E 3 HOH B 36 436 193 HOH HOH . E 3 HOH B 37 437 29 HOH HOH . E 3 HOH B 38 438 262 HOH HOH . E 3 HOH B 39 439 491 HOH HOH . E 3 HOH B 40 440 103 HOH HOH . E 3 HOH B 41 441 82 HOH HOH . E 3 HOH B 42 442 79 HOH HOH . E 3 HOH B 43 443 69 HOH HOH . E 3 HOH B 44 444 411 HOH HOH . E 3 HOH B 45 445 25 HOH HOH . E 3 HOH B 46 446 244 HOH HOH . E 3 HOH B 47 447 239 HOH HOH . E 3 HOH B 48 448 54 HOH HOH . E 3 HOH B 49 449 163 HOH HOH . E 3 HOH B 50 450 32 HOH HOH . E 3 HOH B 51 451 407 HOH HOH . E 3 HOH B 52 452 84 HOH HOH . E 3 HOH B 53 453 298 HOH HOH . E 3 HOH B 54 454 18 HOH HOH . E 3 HOH B 55 455 96 HOH HOH . E 3 HOH B 56 456 365 HOH HOH . E 3 HOH B 57 457 315 HOH HOH . E 3 HOH B 58 458 287 HOH HOH . E 3 HOH B 59 459 146 HOH HOH . E 3 HOH B 60 460 210 HOH HOH . E 3 HOH B 61 461 40 HOH HOH . E 3 HOH B 62 462 219 HOH HOH . E 3 HOH B 63 463 34 HOH HOH . E 3 HOH B 64 464 364 HOH HOH . E 3 HOH B 65 465 234 HOH HOH . E 3 HOH B 66 466 492 HOH HOH . E 3 HOH B 67 467 253 HOH HOH . E 3 HOH B 68 468 222 HOH HOH . E 3 HOH B 69 469 169 HOH HOH . E 3 HOH B 70 470 128 HOH HOH . E 3 HOH B 71 471 204 HOH HOH . E 3 HOH B 72 472 27 HOH HOH . E 3 HOH B 73 473 337 HOH HOH . E 3 HOH B 74 474 154 HOH HOH . E 3 HOH B 75 475 439 HOH HOH . E 3 HOH B 76 476 457 HOH HOH . E 3 HOH B 77 477 450 HOH HOH . E 3 HOH B 78 478 466 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C GOA . . . C 2 -7.995 -63.528 86.007 0.64 15.34 ? C GOA 401 A 1 HETATM 2 C CA GOA . . . C 2 -7.336 -64.455 84.914 0.64 15.5 ? CA GOA 401 A 1 HETATM 3 O O GOA . . . C 2 -9.229 -63.465 86.194 0.64 12.15 ? O GOA 401 A 1 HETATM 4 O OXT GOA . . . C 2 -7.177 -62.988 86.74 0.64 15.26 ? OXT GOA 401 A 1 HETATM 5 O O2 GOA . . . C 2 -8.133 -64.771 83.791 0.64 16.27 ? O2 GOA 401 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #