data_6QIP # _model_server_result.job_id 3on-czcpuLHXdjCUaFjMlQ _model_server_result.datetime_utc '2024-10-19 16:44:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qip # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 6QIP # _exptl.entry_id 6QIP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QIP _cell.length_a 77.02 _cell.length_b 114.45 _cell.length_c 159.35 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QIP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 53 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 A SG CYS 75 A CYS 75 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf3 A SG CYS 90 A CYS 90 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf4 A SG CYS 124 A CYS 124 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf5 A SG CYS 168 A CYS 168 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf6 A SG CYS 200 A CYS 200 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf7 A SG CYS 245 A CYS 245 1_555 A SG CYS 253 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf8 A SG CYS 265 A CYS 265 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf9 A SG CYS 278 A CYS 278 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf10 A SG CYS 316 A CYS 316 1_555 A SG CYS 361 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf11 A SG CYS 360 A CYS 360 1_555 A SG CYS 369 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf12 A SG CYS 392 A CYS 392 1_555 A SG CYS 438 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? disulf ? disulf13 A SG CYS 437 A CYS 437 1_555 A SG CYS 448 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf14 A SG CYS 461 A CYS 461 1_555 A SG CYS 477 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf15 A SG CYS 476 A CYS 476 1_555 A SG CYS 487 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? disulf ? disulf16 A SG CYS 514 A CYS 514 1_555 A SG CYS 559 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf17 A SG CYS 558 A CYS 558 1_555 A SG CYS 567 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? disulf ? disulf18 B SG CYS 48 B CYS 48 1_555 G SG CYS . B CYS 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? disulf ? disulf19 B SG CYS 96 B CYS 96 1_555 B SG CYS 159 B CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? disulf ? disulf20 B SG CYS 198 B CYS 198 1_555 B SG CYS 252 B CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf21 C SG CYS 25 C CYS 25 1_555 C SG CYS 80 C CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? covale ? covale1 E C73 JG5 . A JG5 602 1_555 F S2 BME . A BME 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.824 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 398 n n O1 C6 MES sing 399 n n C2 C3 MES sing 400 n n C2 H21 MES sing 401 n n C2 H22 MES sing 402 n n C3 N4 MES sing 403 n n C3 H31 MES sing 404 n n C3 H32 MES sing 405 n n N4 C5 MES sing 406 n n N4 C7 MES sing 407 n n N4 HN4 MES sing 408 n n C5 C6 MES sing 409 n n C5 H51 MES sing 410 n n C5 H52 MES sing 411 n n C6 H61 MES sing 412 n n C6 H62 MES sing 413 n n C7 C8 MES sing 414 n n C7 H71 MES sing 415 n n C7 H72 MES sing 416 n n C8 S MES sing 417 n n C8 H81 MES sing 418 n n C8 H82 MES sing 419 n n S O1S MES doub 420 n n S O2S MES doub 421 n n S O3S MES sing 422 n n # _atom_sites.entry_id 6QIP _atom_sites.fract_transf_matrix[1][1] 0.012984 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008737 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MES A 1 601 602 MES MES . E 5 JG5 A 1 602 701 JG5 LIG . F 6 BME A 1 603 701 BME LIG . G 7 CYS B 1 301 301 CYS CYS . H 8 HOH A 1 701 19 HOH HOH . H 8 HOH A 2 702 23 HOH HOH . H 8 HOH A 3 703 2 HOH HOH . H 8 HOH A 4 704 5 HOH HOH . H 8 HOH A 5 705 25 HOH HOH . H 8 HOH A 6 706 11 HOH HOH . H 8 HOH A 7 707 4 HOH HOH . H 8 HOH A 8 708 6 HOH HOH . H 8 HOH A 9 709 13 HOH HOH . H 8 HOH A 10 710 1 HOH HOH . H 8 HOH A 11 711 17 HOH HOH . H 8 HOH A 12 712 3 HOH HOH . H 8 HOH A 13 713 24 HOH HOH . H 8 HOH A 14 714 22 HOH HOH . H 8 HOH A 15 715 20 HOH HOH . H 8 HOH A 16 716 26 HOH HOH . H 8 HOH A 17 717 14 HOH HOH . H 8 HOH A 18 718 12 HOH HOH . H 8 HOH A 19 719 18 HOH HOH . H 8 HOH A 20 720 7 HOH HOH . I 8 HOH B 1 401 10 HOH HOH . I 8 HOH B 2 402 8 HOH HOH . I 8 HOH B 3 403 16 HOH HOH . I 8 HOH B 4 404 15 HOH HOH . J 8 HOH C 1 201 21 HOH HOH . J 8 HOH C 2 202 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . D 4 15.705 -28.269 -35.06 1 90.15 ? O1 MES 601 A 1 HETATM 2 C C2 MES . . . D 4 15.858 -27.626 -36.328 1 82.98 ? C2 MES 601 A 1 HETATM 3 C C3 MES . . . D 4 17.062 -26.687 -36.282 1 80.47 ? C3 MES 601 A 1 HETATM 4 N N4 MES . . . D 4 16.802 -25.77 -35.182 1 78.73 ? N4 MES 601 A 1 HETATM 5 C C5 MES . . . D 4 16.587 -26.322 -33.846 1 79.25 ? C5 MES 601 A 1 HETATM 6 C C6 MES . . . D 4 15.482 -27.374 -33.959 1 82.66 ? C6 MES 601 A 1 HETATM 7 C C7 MES . . . D 4 16.959 -24.322 -35.342 1 72.46 ? C7 MES 601 A 1 HETATM 8 C C8 MES . . . D 4 17.562 -24.097 -36.719 1 68.36 ? C8 MES 601 A 1 HETATM 9 S S MES . . . D 4 19.198 -24.002 -36.51 1 81.33 ? S MES 601 A 1 HETATM 10 O O1S MES . . . D 4 19.925 -24.326 -37.767 1 79.59 ? O1S MES 601 A 1 HETATM 11 O O2S MES . . . D 4 19.509 -22.594 -36.179 1 72.84 ? O2S MES 601 A 1 HETATM 12 O O3S MES . . . D 4 19.608 -24.951 -35.425 1 74.23 ? O3S MES 601 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 12 #