data_6QJE
#
_model_server_result.job_id            c5hYWemInwqZdlEJXtB5FQ 
_model_server_result.datetime_utc      '2024-11-14 08:17:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6qje 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    6QJE 
#
_exptl.entry_id    6QJE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            beta-D-galactopyranose 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.56 
_cell.angle_gamma         90 
_cell.entry_id            6QJE 
_cell.length_a            73.703 
_cell.length_b            114.873 
_cell.length_c            121.044 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6QJE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,O 1 1 
B,H,I,J,P 2 1 
C,K,L,M,Q 3 1 
D,N,R 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 391 A CYS 391 1_555 D SG CYS 391 D CYS 391 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 B SG CYS 391 B CYS 391 1_555 C SG CYS 391 C CYS 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                GAL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              beta-D-galactopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     beta-D-galactose;D-galactose;galactose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 GAL sing 83 n n 
C1 O1 GAL sing 84 n n 
C1 O5 GAL sing 85 n n 
C1 H1 GAL sing 86 n n 
C2 C3 GAL sing 87 n n 
C2 O2 GAL sing 88 n n 
C2 H2 GAL sing 89 n n 
C3 C4 GAL sing 90 n n 
C3 O3 GAL sing 91 n n 
C3 H3 GAL sing 92 n n 
C4 C5 GAL sing 93 n n 
C4 O4 GAL sing 94 n n 
C4 H4 GAL sing 95 n n 
C5 C6 GAL sing 96 n n 
C5 O5 GAL sing 97 n n 
C5 H5 GAL sing 98 n n 
C6 O6 GAL sing 99 n n 
C6 H61 GAL sing 100 n n 
C6 H62 GAL sing 101 n n 
O1 HO1 GAL sing 102 n n 
O2 HO2 GAL sing 103 n n 
O3 HO3 GAL sing 104 n n 
O4 HO4 GAL sing 105 n n 
O6 HO6 GAL sing 106 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
GAL DGalpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
GAL b-D-galactopyranose 'COMMON NAME' GMML 1 
GAL b-D-Galp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
GAL Gal 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     6QJE 
_atom_sites.fract_transf_matrix[1][1]    0.013568 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002529 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008705 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008404 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GAL A 1 401 393 GAL GAL . 
F 3 HFK A 1 402 1 HFK Cpd . 
G 4 J4Q A 1 403 1 J4Q LIG . 
H 2 GAL B 1 401 393 GAL GAL . 
I 3 HFK B 1 402 4 HFK Cpd . 
J 4 J4Q B 1 403 3 J4Q LIG . 
K 2 GAL C 1 401 393 GAL GAL . 
L 3 HFK C 1 402 3 HFK Cpd . 
M 5 SO4 C 1 403 1 SO4 SO4 . 
N 4 J4Q D 1 401 4 J4Q LIG . 
O 6 HOH A 1 501 73 HOH HOH . 
O 6 HOH A 2 502 122 HOH HOH . 
O 6 HOH A 3 503 160 HOH HOH . 
O 6 HOH A 4 504 116 HOH HOH . 
O 6 HOH A 5 505 93 HOH HOH . 
O 6 HOH A 6 506 102 HOH HOH . 
O 6 HOH A 7 507 112 HOH HOH . 
O 6 HOH A 8 508 81 HOH HOH . 
O 6 HOH A 9 509 2 HOH HOH . 
O 6 HOH A 10 510 95 HOH HOH . 
O 6 HOH A 11 511 62 HOH HOH . 
O 6 HOH A 12 512 94 HOH HOH . 
O 6 HOH A 13 513 169 HOH HOH . 
O 6 HOH A 14 514 43 HOH HOH . 
O 6 HOH A 15 515 72 HOH HOH . 
O 6 HOH A 16 516 4 HOH HOH . 
O 6 HOH A 17 517 157 HOH HOH . 
O 6 HOH A 18 518 33 HOH HOH . 
O 6 HOH A 19 519 21 HOH HOH . 
O 6 HOH A 20 520 134 HOH HOH . 
O 6 HOH A 21 521 24 HOH HOH . 
O 6 HOH A 22 522 90 HOH HOH . 
O 6 HOH A 23 523 8 HOH HOH . 
O 6 HOH A 24 524 123 HOH HOH . 
O 6 HOH A 25 525 80 HOH HOH . 
O 6 HOH A 26 526 29 HOH HOH . 
O 6 HOH A 27 527 166 HOH HOH . 
O 6 HOH A 28 528 74 HOH HOH . 
O 6 HOH A 29 529 76 HOH HOH . 
O 6 HOH A 30 530 96 HOH HOH . 
O 6 HOH A 31 531 22 HOH HOH . 
O 6 HOH A 32 532 85 HOH HOH . 
O 6 HOH A 33 533 118 HOH HOH . 
O 6 HOH A 34 534 16 HOH HOH . 
O 6 HOH A 35 535 32 HOH HOH . 
O 6 HOH A 36 536 78 HOH HOH . 
O 6 HOH A 37 537 25 HOH HOH . 
O 6 HOH A 38 538 167 HOH HOH . 
O 6 HOH A 39 539 159 HOH HOH . 
O 6 HOH A 40 540 109 HOH HOH . 
O 6 HOH A 41 541 82 HOH HOH . 
O 6 HOH A 42 542 47 HOH HOH . 
O 6 HOH A 43 543 9 HOH HOH . 
O 6 HOH A 44 544 69 HOH HOH . 
O 6 HOH A 45 545 92 HOH HOH . 
O 6 HOH A 46 546 50 HOH HOH . 
O 6 HOH A 47 547 86 HOH HOH . 
O 6 HOH A 48 548 144 HOH HOH . 
O 6 HOH A 49 549 7 HOH HOH . 
O 6 HOH A 50 550 132 HOH HOH . 
O 6 HOH A 51 551 137 HOH HOH . 
O 6 HOH A 52 552 113 HOH HOH . 
O 6 HOH A 53 553 147 HOH HOH . 
O 6 HOH A 54 554 151 HOH HOH . 
O 6 HOH A 55 555 130 HOH HOH . 
O 6 HOH A 56 556 110 HOH HOH . 
O 6 HOH A 57 557 91 HOH HOH . 
O 6 HOH A 58 558 37 HOH HOH . 
O 6 HOH A 59 559 141 HOH HOH . 
O 6 HOH A 60 560 124 HOH HOH . 
O 6 HOH A 61 561 117 HOH HOH . 
O 6 HOH A 62 562 108 HOH HOH . 
O 6 HOH A 63 563 168 HOH HOH . 
O 6 HOH A 64 564 153 HOH HOH . 
O 6 HOH A 65 565 71 HOH HOH . 
O 6 HOH A 66 566 19 HOH HOH . 
O 6 HOH A 67 567 135 HOH HOH . 
O 6 HOH A 68 568 98 HOH HOH . 
O 6 HOH A 69 569 150 HOH HOH . 
O 6 HOH A 70 570 101 HOH HOH . 
O 6 HOH A 71 571 145 HOH HOH . 
O 6 HOH A 72 572 63 HOH HOH . 
O 6 HOH A 73 573 161 HOH HOH . 
O 6 HOH A 74 574 67 HOH HOH . 
O 6 HOH A 75 575 121 HOH HOH . 
O 6 HOH A 76 576 129 HOH HOH . 
O 6 HOH A 77 577 28 HOH HOH . 
O 6 HOH A 78 578 120 HOH HOH . 
O 6 HOH A 79 579 131 HOH HOH . 
O 6 HOH A 80 580 154 HOH HOH . 
O 6 HOH A 81 581 172 HOH HOH . 
P 6 HOH B 1 501 31 HOH HOH . 
P 6 HOH B 2 502 48 HOH HOH . 
P 6 HOH B 3 503 105 HOH HOH . 
P 6 HOH B 4 504 35 HOH HOH . 
P 6 HOH B 5 505 79 HOH HOH . 
P 6 HOH B 6 506 70 HOH HOH . 
P 6 HOH B 7 507 99 HOH HOH . 
P 6 HOH B 8 508 17 HOH HOH . 
P 6 HOH B 9 509 54 HOH HOH . 
P 6 HOH B 10 510 140 HOH HOH . 
P 6 HOH B 11 511 65 HOH HOH . 
P 6 HOH B 12 512 142 HOH HOH . 
P 6 HOH B 13 513 68 HOH HOH . 
P 6 HOH B 14 514 3 HOH HOH . 
P 6 HOH B 15 515 44 HOH HOH . 
P 6 HOH B 16 516 136 HOH HOH . 
P 6 HOH B 17 517 13 HOH HOH . 
P 6 HOH B 18 518 27 HOH HOH . 
P 6 HOH B 19 519 162 HOH HOH . 
P 6 HOH B 20 520 88 HOH HOH . 
P 6 HOH B 21 521 23 HOH HOH . 
P 6 HOH B 22 522 45 HOH HOH . 
P 6 HOH B 23 523 53 HOH HOH . 
P 6 HOH B 24 524 61 HOH HOH . 
P 6 HOH B 25 525 119 HOH HOH . 
P 6 HOH B 26 526 77 HOH HOH . 
P 6 HOH B 27 527 30 HOH HOH . 
P 6 HOH B 28 528 10 HOH HOH . 
P 6 HOH B 29 529 1 HOH HOH . 
P 6 HOH B 30 530 170 HOH HOH . 
P 6 HOH B 31 531 60 HOH HOH . 
P 6 HOH B 32 532 15 HOH HOH . 
P 6 HOH B 33 533 18 HOH HOH . 
P 6 HOH B 34 534 163 HOH HOH . 
P 6 HOH B 35 535 46 HOH HOH . 
P 6 HOH B 36 536 64 HOH HOH . 
P 6 HOH B 37 537 143 HOH HOH . 
P 6 HOH B 38 538 42 HOH HOH . 
P 6 HOH B 39 539 75 HOH HOH . 
P 6 HOH B 40 540 59 HOH HOH . 
P 6 HOH B 41 541 40 HOH HOH . 
P 6 HOH B 42 542 155 HOH HOH . 
P 6 HOH B 43 543 111 HOH HOH . 
P 6 HOH B 44 544 100 HOH HOH . 
P 6 HOH B 45 545 103 HOH HOH . 
Q 6 HOH C 1 501 57 HOH HOH . 
Q 6 HOH C 2 502 83 HOH HOH . 
Q 6 HOH C 3 503 89 HOH HOH . 
Q 6 HOH C 4 504 20 HOH HOH . 
Q 6 HOH C 5 505 84 HOH HOH . 
Q 6 HOH C 6 506 126 HOH HOH . 
Q 6 HOH C 7 507 149 HOH HOH . 
Q 6 HOH C 8 508 6 HOH HOH . 
Q 6 HOH C 9 509 115 HOH HOH . 
Q 6 HOH C 10 510 34 HOH HOH . 
Q 6 HOH C 11 511 5 HOH HOH . 
Q 6 HOH C 12 512 11 HOH HOH . 
Q 6 HOH C 13 513 52 HOH HOH . 
Q 6 HOH C 14 514 66 HOH HOH . 
Q 6 HOH C 15 515 106 HOH HOH . 
Q 6 HOH C 16 516 58 HOH HOH . 
Q 6 HOH C 17 517 138 HOH HOH . 
Q 6 HOH C 18 518 158 HOH HOH . 
R 6 HOH D 1 501 165 HOH HOH . 
R 6 HOH D 2 502 148 HOH HOH . 
R 6 HOH D 3 503 127 HOH HOH . 
R 6 HOH D 4 504 107 HOH HOH . 
R 6 HOH D 5 505 164 HOH HOH . 
R 6 HOH D 6 506 156 HOH HOH . 
R 6 HOH D 7 507 133 HOH HOH . 
R 6 HOH D 8 508 104 HOH HOH . 
R 6 HOH D 9 509 12 HOH HOH . 
R 6 HOH D 10 510 97 HOH HOH . 
R 6 HOH D 11 511 41 HOH HOH . 
R 6 HOH D 12 512 38 HOH HOH . 
R 6 HOH D 13 513 26 HOH HOH . 
R 6 HOH D 14 514 114 HOH HOH . 
R 6 HOH D 15 515 14 HOH HOH . 
R 6 HOH D 16 516 36 HOH HOH . 
R 6 HOH D 17 517 49 HOH HOH . 
R 6 HOH D 18 518 125 HOH HOH . 
R 6 HOH D 19 519 128 HOH HOH . 
R 6 HOH D 20 520 152 HOH HOH . 
R 6 HOH D 21 521 55 HOH HOH . 
R 6 HOH D 22 522 146 HOH HOH . 
R 6 HOH D 23 523 171 HOH HOH . 
R 6 HOH D 24 524 51 HOH HOH . 
R 6 HOH D 25 525 56 HOH HOH . 
R 6 HOH D 26 526 39 HOH HOH . 
R 6 HOH D 27 527 87 HOH HOH . 
R 6 HOH D 28 528 139 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GAL . . . E 2 -16.659 -9.964 -23.198 1 43.8 ? C1 GAL 401 A 1 
HETATM 2 C C2 GAL . . . E 2 -17.268 -8.688 -22.61 1 37.57 ? C2 GAL 401 A 1 
HETATM 3 C C3 GAL . . . E 2 -18.54 -8.328 -23.403 1 36.13 ? C3 GAL 401 A 1 
HETATM 4 C C4 GAL . . . E 2 -18.227 -8.228 -24.918 1 33.85 ? C4 GAL 401 A 1 
HETATM 5 C C5 GAL . . . E 2 -17.383 -9.428 -25.366 1 38.62 ? C5 GAL 401 A 1 
HETATM 6 C C6 GAL . . . E 2 -16.783 -9.275 -26.746 1 34.99 ? C6 GAL 401 A 1 
HETATM 7 O O1 GAL . . . E 2 -15.548 -10.388 -22.511 1 53.63 ? O1 GAL 401 A 1 
HETATM 8 O O2 GAL . . . E 2 -17.65 -8.855 -21.268 1 36.31 ? O2 GAL 401 A 1 
HETATM 9 O O3 GAL . . . E 2 -19.108 -7.09 -22.964 1 32.77 ? O3 GAL 401 A 1 
HETATM 10 O O4 GAL . . . E 2 -17.523 -7.046 -25.218 1 37 ? O4 GAL 401 A 1 
HETATM 11 O O5 GAL . . . E 2 -16.261 -9.675 -24.499 1 43.98 ? O5 GAL 401 A 1 
HETATM 12 O O6 GAL . . . E 2 -17.671 -9.772 -27.704 1 34.73 ? O6 GAL 401 A 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           12 
#