data_6QJU # _model_server_result.job_id '_UCotvz1mUa1pf7SQ0X5vQ' _model_server_result.datetime_utc '2024-11-12 19:46:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qju # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 6QJU # _exptl.entry_id 6QJU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 5 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QJU _cell.length_a 50.951 _cell.length_b 62.071 _cell.length_c 84.783 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QJU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASN 16 B ASN 37 1_555 J NA NA . B NA 303 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc2 B O TYR 92 B TYR 113 1_555 I NA NA . B NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.769 ? metalc ? metalc3 B O ILE 93 B ILE 114 1_555 I NA NA . B NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc4 B O ASN 95 B ASN 116 1_555 I NA NA . B NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? metalc ? metalc5 I NA NA . B NA 302 1_555 L O HOH . B HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc6 J NA NA . B NA 303 1_555 L O HOH . B HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6QJU _atom_sites.fract_transf_matrix[1][1] 0.019627 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016111 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011795 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 301 301 EDO EDO . D 2 EDO A 1 302 302 EDO EDO . E 3 SCN A 1 303 303 SCN SCN . F 4 J58 A 1 304 400 J58 LIG . G 2 EDO B 1 300 300 EDO EDO . H 5 DMS B 1 301 301 DMS DMS . I 6 NA B 1 302 302 NA NA . J 6 NA B 1 303 303 NA NA . K 7 HOH A 1 401 115 HOH HOH . K 7 HOH A 2 402 37 HOH HOH . K 7 HOH A 3 403 392 HOH HOH . K 7 HOH A 4 404 423 HOH HOH . K 7 HOH A 5 405 43 HOH HOH . K 7 HOH A 6 406 409 HOH HOH . K 7 HOH A 7 407 53 HOH HOH . K 7 HOH A 8 408 222 HOH HOH . K 7 HOH A 9 409 95 HOH HOH . K 7 HOH A 10 410 178 HOH HOH . K 7 HOH A 11 411 104 HOH HOH . K 7 HOH A 12 412 244 HOH HOH . K 7 HOH A 13 413 58 HOH HOH . K 7 HOH A 14 414 74 HOH HOH . K 7 HOH A 15 415 414 HOH HOH . K 7 HOH A 16 416 34 HOH HOH . K 7 HOH A 17 417 107 HOH HOH . K 7 HOH A 18 418 416 HOH HOH . K 7 HOH A 19 419 23 HOH HOH . K 7 HOH A 20 420 413 HOH HOH . K 7 HOH A 21 421 56 HOH HOH . K 7 HOH A 22 422 9 HOH HOH . K 7 HOH A 23 423 50 HOH HOH . K 7 HOH A 24 424 86 HOH HOH . K 7 HOH A 25 425 140 HOH HOH . K 7 HOH A 26 426 106 HOH HOH . K 7 HOH A 27 427 127 HOH HOH . K 7 HOH A 28 428 322 HOH HOH . K 7 HOH A 29 429 63 HOH HOH . K 7 HOH A 30 430 65 HOH HOH . K 7 HOH A 31 431 284 HOH HOH . K 7 HOH A 32 432 40 HOH HOH . K 7 HOH A 33 433 268 HOH HOH . K 7 HOH A 34 434 246 HOH HOH . K 7 HOH A 35 435 163 HOH HOH . K 7 HOH A 36 436 14 HOH HOH . K 7 HOH A 37 437 205 HOH HOH . K 7 HOH A 38 438 160 HOH HOH . K 7 HOH A 39 439 27 HOH HOH . K 7 HOH A 40 440 59 HOH HOH . K 7 HOH A 41 441 15 HOH HOH . K 7 HOH A 42 442 400 HOH HOH . K 7 HOH A 43 443 150 HOH HOH . K 7 HOH A 44 444 261 HOH HOH . K 7 HOH A 45 445 394 HOH HOH . K 7 HOH A 46 446 13 HOH HOH . K 7 HOH A 47 447 46 HOH HOH . K 7 HOH A 48 448 94 HOH HOH . K 7 HOH A 49 449 82 HOH HOH . K 7 HOH A 50 450 162 HOH HOH . K 7 HOH A 51 451 247 HOH HOH . K 7 HOH A 52 452 243 HOH HOH . K 7 HOH A 53 453 129 HOH HOH . K 7 HOH A 54 454 32 HOH HOH . K 7 HOH A 55 455 75 HOH HOH . K 7 HOH A 56 456 357 HOH HOH . K 7 HOH A 57 457 255 HOH HOH . K 7 HOH A 58 458 96 HOH HOH . K 7 HOH A 59 459 68 HOH HOH . K 7 HOH A 60 460 71 HOH HOH . K 7 HOH A 61 461 52 HOH HOH . K 7 HOH A 62 462 390 HOH HOH . K 7 HOH A 63 463 241 HOH HOH . K 7 HOH A 64 464 171 HOH HOH . K 7 HOH A 65 465 57 HOH HOH . K 7 HOH A 66 466 368 HOH HOH . K 7 HOH A 67 467 97 HOH HOH . K 7 HOH A 68 468 227 HOH HOH . K 7 HOH A 69 469 51 HOH HOH . K 7 HOH A 70 470 28 HOH HOH . K 7 HOH A 71 471 12 HOH HOH . K 7 HOH A 72 472 64 HOH HOH . K 7 HOH A 73 473 114 HOH HOH . K 7 HOH A 74 474 420 HOH HOH . K 7 HOH A 75 475 29 HOH HOH . K 7 HOH A 76 476 192 HOH HOH . K 7 HOH A 77 477 100 HOH HOH . K 7 HOH A 78 478 93 HOH HOH . K 7 HOH A 79 479 67 HOH HOH . K 7 HOH A 80 480 276 HOH HOH . K 7 HOH A 81 481 189 HOH HOH . K 7 HOH A 82 482 206 HOH HOH . K 7 HOH A 83 483 383 HOH HOH . K 7 HOH A 84 484 168 HOH HOH . K 7 HOH A 85 485 112 HOH HOH . K 7 HOH A 86 486 373 HOH HOH . K 7 HOH A 87 487 384 HOH HOH . K 7 HOH A 88 488 360 HOH HOH . K 7 HOH A 89 489 76 HOH HOH . K 7 HOH A 90 490 405 HOH HOH . K 7 HOH A 91 491 410 HOH HOH . K 7 HOH A 92 492 224 HOH HOH . K 7 HOH A 93 493 386 HOH HOH . K 7 HOH A 94 494 161 HOH HOH . K 7 HOH A 95 495 388 HOH HOH . K 7 HOH A 96 496 399 HOH HOH . K 7 HOH A 97 497 44 HOH HOH . K 7 HOH A 98 498 258 HOH HOH . K 7 HOH A 99 499 262 HOH HOH . K 7 HOH A 100 500 355 HOH HOH . K 7 HOH A 101 501 135 HOH HOH . K 7 HOH A 102 502 391 HOH HOH . K 7 HOH A 103 503 406 HOH HOH . K 7 HOH A 104 504 186 HOH HOH . K 7 HOH A 105 505 408 HOH HOH . K 7 HOH A 106 506 145 HOH HOH . K 7 HOH A 107 507 419 HOH HOH . K 7 HOH A 108 508 183 HOH HOH . K 7 HOH A 109 509 256 HOH HOH . K 7 HOH A 110 510 130 HOH HOH . K 7 HOH A 111 511 119 HOH HOH . K 7 HOH A 112 512 101 HOH HOH . K 7 HOH A 113 513 353 HOH HOH . K 7 HOH A 114 514 131 HOH HOH . K 7 HOH A 115 515 151 HOH HOH . K 7 HOH A 116 516 108 HOH HOH . K 7 HOH A 117 517 126 HOH HOH . K 7 HOH A 118 518 80 HOH HOH . K 7 HOH A 119 519 412 HOH HOH . K 7 HOH A 120 520 332 HOH HOH . K 7 HOH A 121 521 279 HOH HOH . K 7 HOH A 122 522 166 HOH HOH . K 7 HOH A 123 523 221 HOH HOH . K 7 HOH A 124 524 149 HOH HOH . K 7 HOH A 125 525 201 HOH HOH . K 7 HOH A 126 526 79 HOH HOH . K 7 HOH A 127 527 299 HOH HOH . K 7 HOH A 128 528 164 HOH HOH . K 7 HOH A 129 529 181 HOH HOH . K 7 HOH A 130 530 296 HOH HOH . L 7 HOH B 1 401 403 HOH HOH . L 7 HOH B 2 402 323 HOH HOH . L 7 HOH B 3 403 424 HOH HOH . L 7 HOH B 4 404 266 HOH HOH . L 7 HOH B 5 405 325 HOH HOH . L 7 HOH B 6 406 165 HOH HOH . L 7 HOH B 7 407 225 HOH HOH . L 7 HOH B 8 408 364 HOH HOH . L 7 HOH B 9 409 362 HOH HOH . L 7 HOH B 10 410 396 HOH HOH . L 7 HOH B 11 411 25 HOH HOH . L 7 HOH B 12 412 375 HOH HOH . L 7 HOH B 13 413 248 HOH HOH . L 7 HOH B 14 414 240 HOH HOH . L 7 HOH B 15 415 369 HOH HOH . L 7 HOH B 16 416 62 HOH HOH . L 7 HOH B 17 417 417 HOH HOH . L 7 HOH B 18 418 110 HOH HOH . L 7 HOH B 19 419 377 HOH HOH . L 7 HOH B 20 420 89 HOH HOH . L 7 HOH B 21 421 66 HOH HOH . L 7 HOH B 22 422 45 HOH HOH . L 7 HOH B 23 423 4 HOH HOH . L 7 HOH B 24 424 363 HOH HOH . L 7 HOH B 25 425 92 HOH HOH . L 7 HOH B 26 426 361 HOH HOH . L 7 HOH B 27 427 35 HOH HOH . L 7 HOH B 28 428 3 HOH HOH . L 7 HOH B 29 429 7 HOH HOH . L 7 HOH B 30 430 113 HOH HOH . L 7 HOH B 31 431 239 HOH HOH . L 7 HOH B 32 432 237 HOH HOH . L 7 HOH B 33 433 117 HOH HOH . L 7 HOH B 34 434 17 HOH HOH . L 7 HOH B 35 435 229 HOH HOH . L 7 HOH B 36 436 282 HOH HOH . L 7 HOH B 37 437 18 HOH HOH . L 7 HOH B 38 438 335 HOH HOH . L 7 HOH B 39 439 31 HOH HOH . L 7 HOH B 40 440 6 HOH HOH . L 7 HOH B 41 441 139 HOH HOH . L 7 HOH B 42 442 39 HOH HOH . L 7 HOH B 43 443 236 HOH HOH . L 7 HOH B 44 444 382 HOH HOH . L 7 HOH B 45 445 55 HOH HOH . L 7 HOH B 46 446 24 HOH HOH . L 7 HOH B 47 447 380 HOH HOH . L 7 HOH B 48 448 245 HOH HOH . L 7 HOH B 49 449 103 HOH HOH . L 7 HOH B 50 450 257 HOH HOH . L 7 HOH B 51 451 30 HOH HOH . L 7 HOH B 52 452 147 HOH HOH . L 7 HOH B 53 453 33 HOH HOH . L 7 HOH B 54 454 11 HOH HOH . L 7 HOH B 55 455 21 HOH HOH . L 7 HOH B 56 456 84 HOH HOH . L 7 HOH B 57 457 22 HOH HOH . L 7 HOH B 58 458 263 HOH HOH . L 7 HOH B 59 459 81 HOH HOH . L 7 HOH B 60 460 102 HOH HOH . L 7 HOH B 61 461 1 HOH HOH . L 7 HOH B 62 462 278 HOH HOH . L 7 HOH B 63 463 41 HOH HOH . L 7 HOH B 64 464 395 HOH HOH . L 7 HOH B 65 465 118 HOH HOH . L 7 HOH B 66 466 16 HOH HOH . L 7 HOH B 67 467 36 HOH HOH . L 7 HOH B 68 468 371 HOH HOH . L 7 HOH B 69 469 60 HOH HOH . L 7 HOH B 70 470 85 HOH HOH . L 7 HOH B 71 471 324 HOH HOH . L 7 HOH B 72 472 138 HOH HOH . L 7 HOH B 73 473 20 HOH HOH . L 7 HOH B 74 474 174 HOH HOH . L 7 HOH B 75 475 8 HOH HOH . L 7 HOH B 76 476 188 HOH HOH . L 7 HOH B 77 477 69 HOH HOH . L 7 HOH B 78 478 133 HOH HOH . L 7 HOH B 79 479 238 HOH HOH . L 7 HOH B 80 480 235 HOH HOH . L 7 HOH B 81 481 290 HOH HOH . L 7 HOH B 82 482 99 HOH HOH . L 7 HOH B 83 483 77 HOH HOH . L 7 HOH B 84 484 143 HOH HOH . L 7 HOH B 85 485 124 HOH HOH . L 7 HOH B 86 486 169 HOH HOH . L 7 HOH B 87 487 128 HOH HOH . L 7 HOH B 88 488 378 HOH HOH . L 7 HOH B 89 489 49 HOH HOH . L 7 HOH B 90 490 122 HOH HOH . L 7 HOH B 91 491 73 HOH HOH . L 7 HOH B 92 492 72 HOH HOH . L 7 HOH B 93 493 47 HOH HOH . L 7 HOH B 94 494 288 HOH HOH . L 7 HOH B 95 495 328 HOH HOH . L 7 HOH B 96 496 307 HOH HOH . L 7 HOH B 97 497 219 HOH HOH . L 7 HOH B 98 498 185 HOH HOH . L 7 HOH B 99 499 389 HOH HOH . L 7 HOH B 100 500 125 HOH HOH . L 7 HOH B 101 501 418 HOH HOH . L 7 HOH B 102 502 121 HOH HOH . L 7 HOH B 103 503 159 HOH HOH . L 7 HOH B 104 504 379 HOH HOH . L 7 HOH B 105 505 365 HOH HOH . L 7 HOH B 106 506 415 HOH HOH . L 7 HOH B 107 507 348 HOH HOH . L 7 HOH B 108 508 88 HOH HOH . L 7 HOH B 109 509 411 HOH HOH . L 7 HOH B 110 510 273 HOH HOH . L 7 HOH B 111 511 292 HOH HOH . L 7 HOH B 112 512 116 HOH HOH . L 7 HOH B 113 513 170 HOH HOH . L 7 HOH B 114 514 272 HOH HOH . L 7 HOH B 115 515 397 HOH HOH . L 7 HOH B 116 516 87 HOH HOH . L 7 HOH B 117 517 98 HOH HOH . L 7 HOH B 118 518 309 HOH HOH . L 7 HOH B 119 519 304 HOH HOH . L 7 HOH B 120 520 387 HOH HOH . L 7 HOH B 121 521 349 HOH HOH . L 7 HOH B 122 522 42 HOH HOH . L 7 HOH B 123 523 142 HOH HOH . L 7 HOH B 124 524 286 HOH HOH . L 7 HOH B 125 525 281 HOH HOH . L 7 HOH B 126 526 109 HOH HOH . L 7 HOH B 127 527 277 HOH HOH . L 7 HOH B 128 528 38 HOH HOH . L 7 HOH B 129 529 374 HOH HOH . L 7 HOH B 130 530 376 HOH HOH . L 7 HOH B 131 531 230 HOH HOH . L 7 HOH B 132 532 70 HOH HOH . L 7 HOH B 133 533 91 HOH HOH . L 7 HOH B 134 534 172 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . H 5 -16.356 -13.743 24.905 0.68 17.78 ? S DMS 301 B 1 HETATM 2 O O DMS . . . H 5 -16.176 -13.94 23.438 0.82 17.73 ? O DMS 301 B 1 HETATM 3 C C1 DMS . . . H 5 -15.113 -14.847 25.62 0.94 19.97 ? C1 DMS 301 B 1 HETATM 4 C C2 DMS . . . H 5 -15.556 -12.163 25.304 0.96 20.85 ? C2 DMS 301 B 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 396 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #