data_6QJW # _model_server_result.job_id vkUowWRutAGrtYfZYrBGWQ _model_server_result.datetime_utc '2024-11-27 15:02:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qjw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6QJW # _exptl.entry_id 6QJW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 478.88 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-CHLOROTETRACYCLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QJW _cell.length_a 68.138 _cell.length_b 68.138 _cell.length_c 180.917 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QJW _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 68.138 68.138 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O11 CTC . A CTC 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? metalc ? metalc2 B O12 CTC . A CTC 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc3 C MG MG . A MG 302 1_555 I O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc4 C MG MG . A MG 302 1_555 I O HOH . A HOH 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.879 ? metalc ? metalc5 C MG MG . A MG 302 1_555 I O HOH . A HOH 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? # _chem_comp.formula 'C22 H23 Cl N2 O8' _chem_comp.formula_weight 478.88 _chem_comp.id CTC _chem_comp.mon_nstd_flag . _chem_comp.name 7-CHLOROTETRACYCLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CTC doub 70 n n C1 C2 CTC sing 71 n n C1 C4B CTC sing 72 n n C2 C2' CTC sing 73 n n C2 C3 CTC doub 74 n n C2' O2' CTC doub 75 n n C2' N2' CTC sing 76 n n N2' HN21 CTC sing 77 n n N2' HN22 CTC sing 78 n n C3 O3 CTC sing 79 n n C3 C4 CTC sing 80 n n O3 HO3 CTC sing 81 n n C4 N4 CTC sing 82 n n C4 C4A CTC sing 83 n n C4 H4 CTC sing 84 n n N4 C4' CTC sing 85 n n N4 C4D CTC sing 86 n n C4' "H4'1" CTC sing 87 n n C4' "H4'2" CTC sing 88 n n C4' "H4'3" CTC sing 89 n n C4D H4A1 CTC sing 90 n n C4D H4A2 CTC sing 91 n n C4D H4A3 CTC sing 92 n n C4A C5 CTC sing 93 n n C4A C4B CTC sing 94 n n C4A H4A CTC sing 95 n n C5 C5A CTC sing 96 n n C5 H51 CTC sing 97 n n C5 H52 CTC sing 98 n n C5A C6 CTC sing 99 n n C5A C5B CTC sing 100 n n C5A H5A CTC sing 101 n n C6 O6 CTC sing 102 n n C6 C6' CTC sing 103 n n C6 C6A CTC sing 104 n n O6 HO6 CTC sing 105 n n C6' "H6'1" CTC sing 106 n n C6' "H6'2" CTC sing 107 n n C6' "H6'3" CTC sing 108 n n C6A C7 CTC doub 109 n y C6A C6B CTC sing 110 n y C7 CL7 CTC sing 111 n n C7 C8 CTC sing 112 n y C8 C9 CTC doub 113 n y C8 H8 CTC sing 114 n n C9 C10 CTC sing 115 n y C9 H9 CTC sing 116 n n C10 O10 CTC sing 117 n n C10 C6B CTC doub 118 n y O10 HO1 CTC sing 119 n n C6B C11 CTC sing 120 n n C11 O11 CTC doub 121 n n C11 C5B CTC sing 122 n n C5B C12 CTC doub 123 n n C12 O12 CTC sing 124 n n C12 C4B CTC sing 125 n n O12 HO2 CTC sing 126 n n C4B O4B CTC sing 127 n n O4B HO4 CTC sing 128 n n # _atom_sites.entry_id 6QJW _atom_sites.fract_transf_matrix[1][1] 0.014676 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014676 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CTC A 1 301 1209 CTC CTC . C 3 MG A 1 302 1210 MG MG . D 4 CL A 1 303 1211 CL CL . E 4 CL A 1 304 1212 CL CL . F 4 CL A 1 305 1213 CL CL . G 4 CL A 1 306 1214 CL CL . H 4 CL A 1 307 1215 CL CL . I 5 HOH A 1 401 2003 HOH HOH . I 5 HOH A 2 402 2031 HOH HOH . I 5 HOH A 3 403 2087 HOH HOH . I 5 HOH A 4 404 2037 HOH HOH . I 5 HOH A 5 405 2078 HOH HOH . I 5 HOH A 6 406 2066 HOH HOH . I 5 HOH A 7 407 2013 HOH HOH . I 5 HOH A 8 408 2041 HOH HOH . I 5 HOH A 9 409 2032 HOH HOH . I 5 HOH A 10 410 2121 HOH HOH . I 5 HOH A 11 411 2043 HOH HOH . I 5 HOH A 12 412 2029 HOH HOH . I 5 HOH A 13 413 2107 HOH HOH . I 5 HOH A 14 414 2021 HOH HOH . I 5 HOH A 15 415 2009 HOH HOH . I 5 HOH A 16 416 2099 HOH HOH . I 5 HOH A 17 417 2076 HOH HOH . I 5 HOH A 18 418 2098 HOH HOH . I 5 HOH A 19 419 2040 HOH HOH . I 5 HOH A 20 420 2073 HOH HOH . I 5 HOH A 21 421 2004 HOH HOH . I 5 HOH A 22 422 2047 HOH HOH . I 5 HOH A 23 423 2028 HOH HOH . I 5 HOH A 24 424 2012 HOH HOH . I 5 HOH A 25 425 2025 HOH HOH . I 5 HOH A 26 426 2074 HOH HOH . I 5 HOH A 27 427 2060 HOH HOH . I 5 HOH A 28 428 2026 HOH HOH . I 5 HOH A 29 429 2068 HOH HOH . I 5 HOH A 30 430 2064 HOH HOH . I 5 HOH A 31 431 2072 HOH HOH . I 5 HOH A 32 432 2002 HOH HOH . I 5 HOH A 33 433 2046 HOH HOH . I 5 HOH A 34 434 2035 HOH HOH . I 5 HOH A 35 435 2082 HOH HOH . I 5 HOH A 36 436 2045 HOH HOH . I 5 HOH A 37 437 2092 HOH HOH . I 5 HOH A 38 438 2059 HOH HOH . I 5 HOH A 39 439 2001 HOH HOH . I 5 HOH A 40 440 2077 HOH HOH . I 5 HOH A 41 441 2065 HOH HOH . I 5 HOH A 42 442 2007 HOH HOH . I 5 HOH A 43 443 2014 HOH HOH . I 5 HOH A 44 444 2088 HOH HOH . I 5 HOH A 45 445 2030 HOH HOH . I 5 HOH A 46 446 2033 HOH HOH . I 5 HOH A 47 447 2050 HOH HOH . I 5 HOH A 48 448 2036 HOH HOH . I 5 HOH A 49 449 2027 HOH HOH . I 5 HOH A 50 450 2054 HOH HOH . I 5 HOH A 51 451 2071 HOH HOH . I 5 HOH A 52 452 2056 HOH HOH . I 5 HOH A 53 453 2112 HOH HOH . I 5 HOH A 54 454 2008 HOH HOH . I 5 HOH A 55 455 2120 HOH HOH . I 5 HOH A 56 456 2005 HOH HOH . I 5 HOH A 57 457 2058 HOH HOH . I 5 HOH A 58 458 2101 HOH HOH . I 5 HOH A 59 459 2061 HOH HOH . I 5 HOH A 60 460 2051 HOH HOH . I 5 HOH A 61 461 2006 HOH HOH . I 5 HOH A 62 462 2039 HOH HOH . I 5 HOH A 63 463 2015 HOH HOH . I 5 HOH A 64 464 2019 HOH HOH . I 5 HOH A 65 465 2063 HOH HOH . I 5 HOH A 66 466 2084 HOH HOH . I 5 HOH A 67 467 2108 HOH HOH . I 5 HOH A 68 468 2010 HOH HOH . I 5 HOH A 69 469 2091 HOH HOH . I 5 HOH A 70 470 2022 HOH HOH . I 5 HOH A 71 471 2017 HOH HOH . I 5 HOH A 72 472 2034 HOH HOH . I 5 HOH A 73 473 2085 HOH HOH . I 5 HOH A 74 474 2069 HOH HOH . I 5 HOH A 75 475 2038 HOH HOH . I 5 HOH A 76 476 2052 HOH HOH . I 5 HOH A 77 477 2016 HOH HOH . I 5 HOH A 78 478 2111 HOH HOH . I 5 HOH A 79 479 2055 HOH HOH . I 5 HOH A 80 480 2020 HOH HOH . I 5 HOH A 81 481 2024 HOH HOH . I 5 HOH A 82 482 2067 HOH HOH . I 5 HOH A 83 483 2018 HOH HOH . I 5 HOH A 84 484 2062 HOH HOH . I 5 HOH A 85 485 2057 HOH HOH . I 5 HOH A 86 486 2103 HOH HOH . I 5 HOH A 87 487 2044 HOH HOH . I 5 HOH A 88 488 2096 HOH HOH . I 5 HOH A 89 489 2116 HOH HOH . I 5 HOH A 90 490 2075 HOH HOH . I 5 HOH A 91 491 2053 HOH HOH . I 5 HOH A 92 492 2093 HOH HOH . I 5 HOH A 93 493 2115 HOH HOH . I 5 HOH A 94 494 2048 HOH HOH . I 5 HOH A 95 495 2042 HOH HOH . I 5 HOH A 96 496 2117 HOH HOH . I 5 HOH A 97 497 2049 HOH HOH . I 5 HOH A 98 498 2100 HOH HOH . I 5 HOH A 99 499 2094 HOH HOH . I 5 HOH A 100 500 2122 HOH HOH . I 5 HOH A 101 501 2119 HOH HOH . I 5 HOH A 102 502 2079 HOH HOH . I 5 HOH A 103 503 2114 HOH HOH . I 5 HOH A 104 504 2113 HOH HOH . I 5 HOH A 105 505 2102 HOH HOH . I 5 HOH A 106 506 2118 HOH HOH . I 5 HOH A 107 507 2089 HOH HOH . I 5 HOH A 108 508 2095 HOH HOH . I 5 HOH A 109 509 2097 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CTC . . . B 2 20.252 34.234 34.859 1 32.73 ? C1 CTC 301 A 1 HETATM 2 O O1 CTC . . . B 2 19.698 34.801 33.912 1 35.69 ? O1 CTC 301 A 1 HETATM 3 C C2 CTC . . . B 2 19.629 33.283 35.669 1 31.6 ? C2 CTC 301 A 1 HETATM 4 C C2' CTC . . . B 2 18.387 32.68 35.178 1 31.97 ? C2' CTC 301 A 1 HETATM 5 O O2' CTC . . . B 2 17.836 31.783 35.778 1 30.12 ? O2' CTC 301 A 1 HETATM 6 N N2' CTC . . . B 2 17.855 33.182 33.919 1 33.25 ? N2' CTC 301 A 1 HETATM 7 C C3 CTC . . . B 2 20.267 32.886 36.812 1 29.49 ? C3 CTC 301 A 1 HETATM 8 O O3 CTC . . . B 2 20.04 31.747 37.392 1 31.4 ? O3 CTC 301 A 1 HETATM 9 C C4 CTC . . . B 2 21.271 33.745 37.534 1 30.61 ? C4 CTC 301 A 1 HETATM 10 N N4 CTC . . . B 2 22.269 32.919 38.296 1 29.03 ? N4 CTC 301 A 1 HETATM 11 C C4' CTC . . . B 2 23.309 32.33 37.465 1 27.21 ? C4' CTC 301 A 1 HETATM 12 C C4D CTC . . . B 2 22.889 33.708 39.363 1 28.3 ? C4D CTC 301 A 1 HETATM 13 C C4A CTC . . . B 2 21.914 34.807 36.596 1 32.55 ? C4A CTC 301 A 1 HETATM 14 C C5 CTC . . . B 2 21.318 36.185 36.831 1 34.63 ? C5 CTC 301 A 1 HETATM 15 C C5A CTC . . . B 2 22.039 37.321 36.107 1 37.89 ? C5A CTC 301 A 1 HETATM 16 C C6 CTC . . . B 2 21.277 38.687 36.226 1 41.15 ? C6 CTC 301 A 1 HETATM 17 O O6 CTC . . . B 2 19.854 38.591 36.073 1 44.25 ? O6 CTC 301 A 1 HETATM 18 C C6' CTC . . . B 2 21.596 39.104 37.662 1 39.63 ? C6' CTC 301 A 1 HETATM 19 C C6A CTC . . . B 2 21.744 39.763 35.254 1 44.38 ? C6A CTC 301 A 1 HETATM 20 C C7 CTC . . . B 2 21.491 41.119 35.502 1 49.82 ? C7 CTC 301 A 1 HETATM 21 CL CL7 CTC . . . B 2 20.606 41.727 36.877 1 60.89 ? CL7 CTC 301 A 1 HETATM 22 C C8 CTC . . . B 2 21.948 42.095 34.632 1 52.81 ? C8 CTC 301 A 1 HETATM 23 C C9 CTC . . . B 2 22.681 41.756 33.508 1 54.17 ? C9 CTC 301 A 1 HETATM 24 C C10 CTC . . . B 2 22.955 40.415 33.226 1 49.71 ? C10 CTC 301 A 1 HETATM 25 O O10 CTC . . . B 2 23.675 40.152 32.112 1 48.25 ? O10 CTC 301 A 1 HETATM 26 C C6B CTC . . . B 2 22.492 39.401 34.105 1 47.01 ? C6B CTC 301 A 1 HETATM 27 C C11 CTC . . . B 2 22.755 38.003 33.774 1 43.92 ? C11 CTC 301 A 1 HETATM 28 O O11 CTC . . . B 2 23.315 37.717 32.663 1 42.81 ? O11 CTC 301 A 1 HETATM 29 C C5B CTC . . . B 2 22.301 36.95 34.665 1 39.15 ? C5B CTC 301 A 1 HETATM 30 C C12 CTC . . . B 2 22.22 35.661 34.233 1 36.7 ? C12 CTC 301 A 1 HETATM 31 O O12 CTC . . . B 2 22.628 35.303 33.005 1 36.91 ? O12 CTC 301 A 1 HETATM 32 C C4B CTC . . . B 2 21.747 34.522 35.111 1 34.01 ? C4B CTC 301 A 1 HETATM 33 O O4B CTC . . . B 2 22.448 33.329 34.784 1 34.68 ? O4B CTC 301 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 33 #