data_6QL0 # _model_server_result.job_id 5WOelbZAP7qur3xsU4gcHw _model_server_result.datetime_utc '2024-11-29 22:21:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ql0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":307}' # _entry.id 6QL0 # _exptl.entry_id 6QL0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6QL0 _cell.length_a 54.666 _cell.length_b 54.666 _cell.length_c 106.274 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QL0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 22 1_555 A SG CYS 160 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 48 A CYS 42 1_555 A SG CYS 64 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 132 A CYS 128 1_555 A SG CYS 233 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 139 A CYS 136 1_555 A SG CYS 206 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf5 A SG CYS 171 A CYS 168 1_555 A SG CYS 185 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 A SG CYS 196 A CYS 191 1_555 A SG CYS 220 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc1 A OE1 GLU 75 A GLU 70 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc2 A O ASN 77 A ASN 72 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc3 A O VAL 80 A VAL 75 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc4 A OE2 GLU 85 A GLU 80 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc5 B CA CA . A CA 301 1_555 L O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc6 B CA CA . A CA 301 1_555 L O HOH . A HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6QL0 _atom_sites.fract_transf_matrix[1][1] 0.018293 _atom_sites.fract_transf_matrix[1][2] 0.010561 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00941 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 3 EDO A 1 302 1 EDO EDO . D 3 EDO A 1 303 2 EDO EDO . E 3 EDO A 1 304 3 EDO EDO . F 3 EDO A 1 305 4 EDO EDO . G 3 EDO A 1 306 5 EDO EDO . H 4 DMS A 1 307 1 DMS DMS . I 4 DMS A 1 308 4 DMS DMS . J 5 J5K A 1 309 2 J5K XXX . K 6 SO4 A 1 310 3 SO4 SO4 . L 7 HOH A 1 401 210 HOH HOH . L 7 HOH A 2 402 113 HOH HOH . L 7 HOH A 3 403 75 HOH HOH . L 7 HOH A 4 404 166 HOH HOH . L 7 HOH A 5 405 73 HOH HOH . L 7 HOH A 6 406 116 HOH HOH . L 7 HOH A 7 407 128 HOH HOH . L 7 HOH A 8 408 8 HOH HOH . L 7 HOH A 9 409 125 HOH HOH . L 7 HOH A 10 410 178 HOH HOH . L 7 HOH A 11 411 54 HOH HOH . L 7 HOH A 12 412 183 HOH HOH . L 7 HOH A 13 413 130 HOH HOH . L 7 HOH A 14 414 191 HOH HOH . L 7 HOH A 15 415 48 HOH HOH . L 7 HOH A 16 416 86 HOH HOH . L 7 HOH A 17 417 124 HOH HOH . L 7 HOH A 18 418 83 HOH HOH . L 7 HOH A 19 419 143 HOH HOH . L 7 HOH A 20 420 82 HOH HOH . L 7 HOH A 21 421 92 HOH HOH . L 7 HOH A 22 422 29 HOH HOH . L 7 HOH A 23 423 112 HOH HOH . L 7 HOH A 24 424 127 HOH HOH . L 7 HOH A 25 425 9 HOH HOH . L 7 HOH A 26 426 193 HOH HOH . L 7 HOH A 27 427 144 HOH HOH . L 7 HOH A 28 428 64 HOH HOH . L 7 HOH A 29 429 89 HOH HOH . L 7 HOH A 30 430 205 HOH HOH . L 7 HOH A 31 431 30 HOH HOH . L 7 HOH A 32 432 155 HOH HOH . L 7 HOH A 33 433 17 HOH HOH . L 7 HOH A 34 434 42 HOH HOH . L 7 HOH A 35 435 157 HOH HOH . L 7 HOH A 36 436 196 HOH HOH . L 7 HOH A 37 437 51 HOH HOH . L 7 HOH A 38 438 206 HOH HOH . L 7 HOH A 39 439 4 HOH HOH . L 7 HOH A 40 440 10 HOH HOH . L 7 HOH A 41 441 135 HOH HOH . L 7 HOH A 42 442 56 HOH HOH . L 7 HOH A 43 443 45 HOH HOH . L 7 HOH A 44 444 154 HOH HOH . L 7 HOH A 45 445 136 HOH HOH . L 7 HOH A 46 446 137 HOH HOH . L 7 HOH A 47 447 2 HOH HOH . L 7 HOH A 48 448 13 HOH HOH . L 7 HOH A 49 449 170 HOH HOH . L 7 HOH A 50 450 67 HOH HOH . L 7 HOH A 51 451 25 HOH HOH . L 7 HOH A 52 452 153 HOH HOH . L 7 HOH A 53 453 115 HOH HOH . L 7 HOH A 54 454 23 HOH HOH . L 7 HOH A 55 455 18 HOH HOH . L 7 HOH A 56 456 34 HOH HOH . L 7 HOH A 57 457 15 HOH HOH . L 7 HOH A 58 458 43 HOH HOH . L 7 HOH A 59 459 27 HOH HOH . L 7 HOH A 60 460 98 HOH HOH . L 7 HOH A 61 461 97 HOH HOH . L 7 HOH A 62 462 39 HOH HOH . L 7 HOH A 63 463 87 HOH HOH . L 7 HOH A 64 464 3 HOH HOH . L 7 HOH A 65 465 26 HOH HOH . L 7 HOH A 66 466 171 HOH HOH . L 7 HOH A 67 467 186 HOH HOH . L 7 HOH A 68 468 40 HOH HOH . L 7 HOH A 69 469 208 HOH HOH . L 7 HOH A 70 470 36 HOH HOH . L 7 HOH A 71 471 105 HOH HOH . L 7 HOH A 72 472 46 HOH HOH . L 7 HOH A 73 473 78 HOH HOH . L 7 HOH A 74 474 14 HOH HOH . L 7 HOH A 75 475 24 HOH HOH . L 7 HOH A 76 476 202 HOH HOH . L 7 HOH A 77 477 123 HOH HOH . L 7 HOH A 78 478 53 HOH HOH . L 7 HOH A 79 479 16 HOH HOH . L 7 HOH A 80 480 33 HOH HOH . L 7 HOH A 81 481 104 HOH HOH . L 7 HOH A 82 482 108 HOH HOH . L 7 HOH A 83 483 90 HOH HOH . L 7 HOH A 84 484 37 HOH HOH . L 7 HOH A 85 485 20 HOH HOH . L 7 HOH A 86 486 57 HOH HOH . L 7 HOH A 87 487 132 HOH HOH . L 7 HOH A 88 488 72 HOH HOH . L 7 HOH A 89 489 85 HOH HOH . L 7 HOH A 90 490 44 HOH HOH . L 7 HOH A 91 491 141 HOH HOH . L 7 HOH A 92 492 19 HOH HOH . L 7 HOH A 93 493 74 HOH HOH . L 7 HOH A 94 494 55 HOH HOH . L 7 HOH A 95 495 71 HOH HOH . L 7 HOH A 96 496 194 HOH HOH . L 7 HOH A 97 497 197 HOH HOH . L 7 HOH A 98 498 58 HOH HOH . L 7 HOH A 99 499 199 HOH HOH . L 7 HOH A 100 500 80 HOH HOH . L 7 HOH A 101 501 76 HOH HOH . L 7 HOH A 102 502 111 HOH HOH . L 7 HOH A 103 503 209 HOH HOH . L 7 HOH A 104 504 189 HOH HOH . L 7 HOH A 105 505 179 HOH HOH . L 7 HOH A 106 506 77 HOH HOH . L 7 HOH A 107 507 60 HOH HOH . L 7 HOH A 108 508 177 HOH HOH . L 7 HOH A 109 509 62 HOH HOH . L 7 HOH A 110 510 93 HOH HOH . L 7 HOH A 111 511 63 HOH HOH . L 7 HOH A 112 512 35 HOH HOH . L 7 HOH A 113 513 31 HOH HOH . L 7 HOH A 114 514 11 HOH HOH . L 7 HOH A 115 515 198 HOH HOH . L 7 HOH A 116 516 81 HOH HOH . L 7 HOH A 117 517 174 HOH HOH . L 7 HOH A 118 518 204 HOH HOH . L 7 HOH A 119 519 52 HOH HOH . L 7 HOH A 120 520 38 HOH HOH . L 7 HOH A 121 521 109 HOH HOH . L 7 HOH A 122 522 149 HOH HOH . L 7 HOH A 123 523 195 HOH HOH . L 7 HOH A 124 524 59 HOH HOH . L 7 HOH A 125 525 79 HOH HOH . L 7 HOH A 126 526 182 HOH HOH . L 7 HOH A 127 527 107 HOH HOH . L 7 HOH A 128 528 96 HOH HOH . L 7 HOH A 129 529 133 HOH HOH . L 7 HOH A 130 530 50 HOH HOH . L 7 HOH A 131 531 21 HOH HOH . L 7 HOH A 132 532 103 HOH HOH . L 7 HOH A 133 533 47 HOH HOH . L 7 HOH A 134 534 94 HOH HOH . L 7 HOH A 135 535 180 HOH HOH . L 7 HOH A 136 536 165 HOH HOH . L 7 HOH A 137 537 140 HOH HOH . L 7 HOH A 138 538 61 HOH HOH . L 7 HOH A 139 539 173 HOH HOH . L 7 HOH A 140 540 65 HOH HOH . L 7 HOH A 141 541 32 HOH HOH . L 7 HOH A 142 542 200 HOH HOH . L 7 HOH A 143 543 207 HOH HOH . L 7 HOH A 144 544 119 HOH HOH . L 7 HOH A 145 545 126 HOH HOH . L 7 HOH A 146 546 91 HOH HOH . L 7 HOH A 147 547 131 HOH HOH . L 7 HOH A 148 548 22 HOH HOH . L 7 HOH A 149 549 84 HOH HOH . L 7 HOH A 150 550 121 HOH HOH . L 7 HOH A 151 551 175 HOH HOH . L 7 HOH A 152 552 176 HOH HOH . L 7 HOH A 153 553 142 HOH HOH . L 7 HOH A 154 554 201 HOH HOH . L 7 HOH A 155 555 70 HOH HOH . L 7 HOH A 156 556 122 HOH HOH . L 7 HOH A 157 557 160 HOH HOH . L 7 HOH A 158 558 139 HOH HOH . L 7 HOH A 159 559 203 HOH HOH . L 7 HOH A 160 560 187 HOH HOH . L 7 HOH A 161 561 138 HOH HOH . L 7 HOH A 162 562 151 HOH HOH . L 7 HOH A 163 563 190 HOH HOH . L 7 HOH A 164 564 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . H 4 1.049 -4 -6.906 1 33.74 ? S DMS 307 A 1 HETATM 2 O O DMS . . . H 4 0.419 -4.021 -8.279 1 30.21 ? O DMS 307 A 1 HETATM 3 C C1 DMS . . . H 4 0.372 -2.637 -5.917 1 32.53 ? C1 DMS 307 A 1 HETATM 4 C C2 DMS . . . H 4 0.363 -5.386 -5.966 1 28.2 ? C2 DMS 307 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #