data_6QL5
#
_model_server_result.job_id            whsAy6csQEKz5Mv23O5ZEQ 
_model_server_result.datetime_utc      '2025-04-11 11:04:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ql5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":1901}' 
#
_entry.id    6QL5 
#
_exptl.entry_id    6QL5 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              358.348 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "4'-PHOSPHOPANTETHEINE" 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6QL5 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6QL5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octadecameric 
_pdbx_struct_assembly.oligomeric_count      18 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 S N N 
? 4 T N N 
? 4 U N N 
? 4 V N N 
? 4 W N N 
? 4 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 180 A SER 180 1_555 S P24 PNS . A PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.615 ? 
covale ? covale2 B OG SER 180 B SER 180 1_555 T P24 PNS . B PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.623 ? 
covale ? covale3 C OG SER 180 C SER 180 1_555 U P24 PNS . C PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.611 ? 
covale ? covale4 D OG SER 180 D SER 180 1_555 V P24 PNS . D PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.62 ? 
covale ? covale5 E OG SER 180 E SER 180 1_555 W P24 PNS . E PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.616 ? 
covale ? covale6 F OG SER 180 F SER 180 1_555 X P24 PNS . F PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.615 ? 
#
_chem_comp.formula           'C11 H23 N2 O7 P S' 
_chem_comp.formula_weight    358.348 
_chem_comp.id                PNS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "4'-PHOSPHOPANTETHEINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O23 P24 PNS sing 312 n n 
O23 HOP1 PNS sing 313 n n 
P24 O25 PNS sing 314 n n 
P24 O26 PNS doub 315 n n 
P24 O27 PNS sing 316 n n 
O25 HOP2 PNS sing 317 n n 
O27 C28 PNS sing 318 n n 
C28 C29 PNS sing 319 n n 
C28 H282 PNS sing 320 n n 
C28 H281 PNS sing 321 n n 
C29 C30 PNS sing 322 n n 
C29 C31 PNS sing 323 n n 
C29 C32 PNS sing 324 n n 
C30 H303 PNS sing 325 n n 
C30 H302 PNS sing 326 n n 
C30 H301 PNS sing 327 n n 
C31 H313 PNS sing 328 n n 
C31 H312 PNS sing 329 n n 
C31 H311 PNS sing 330 n n 
C32 O33 PNS sing 331 n n 
C32 C34 PNS sing 332 n n 
C32 H32 PNS sing 333 n n 
O33 H33 PNS sing 334 n n 
C34 O35 PNS doub 335 n n 
C34 N36 PNS sing 336 n n 
N36 C37 PNS sing 337 n n 
N36 H36 PNS sing 338 n n 
C37 C38 PNS sing 339 n n 
C37 H372 PNS sing 340 n n 
C37 H371 PNS sing 341 n n 
C38 C39 PNS sing 342 n n 
C38 H382 PNS sing 343 n n 
C38 H381 PNS sing 344 n n 
C39 O40 PNS doub 345 n n 
C39 N41 PNS sing 346 n n 
N41 C42 PNS sing 347 n n 
N41 H41 PNS sing 348 n n 
C42 C43 PNS sing 349 n n 
C42 H422 PNS sing 350 n n 
C42 H421 PNS sing 351 n n 
C43 S44 PNS sing 352 n n 
C43 H431 PNS sing 353 n n 
C43 H432 PNS sing 354 n n 
S44 H44 PNS sing 355 n n 
#
_atom_sites.entry_id                     6QL5 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
S 4 PNS A 1 1901 180 PNS PSE . 
T 4 PNS B 1 1901 180 PNS PSE . 
U 4 PNS C 1 1901 180 PNS PSE . 
V 4 PNS D 1 1901 180 PNS PSE . 
W 4 PNS E 1 1901 180 PNS PSE . 
X 4 PNS F 1 1901 180 PNS PSE . 
Y 5 FMN G 1 2101 3051 FMN FMN . 
Z 5 FMN H 1 2101 3051 FMN FMN . 
AA 5 FMN I 1 2101 3051 FMN FMN . 
BA 5 FMN J 1 2101 3051 FMN FMN . 
CA 5 FMN K 1 2101 3051 FMN FMN . 
DA 5 FMN L 1 2101 3051 FMN FMN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O23 PNS . . . W 4 163.425 117.88 262.933 1 106.34 ? O23 PNS 1901 E 1 
HETATM 2 P P24 PNS . . . W 4 164.91 118.046 263.171 1 112.12 ? P24 PNS 1901 E 1 
HETATM 3 O O26 PNS . . . W 4 165.677 116.984 262.402 1 101.41 ? O26 PNS 1901 E 1 
HETATM 4 O O27 PNS . . . W 4 165.16 117.994 264.763 1 115.46 ? O27 PNS 1901 E 1 
HETATM 5 C C28 PNS . . . W 4 164.859 116.84 265.565 1 122.06 ? C28 PNS 1901 E 1 
HETATM 6 C C29 PNS . . . W 4 166.052 115.853 265.634 1 134.11 ? C29 PNS 1901 E 1 
HETATM 7 C C30 PNS . . . W 4 167.408 116.596 265.821 1 134.25 ? C30 PNS 1901 E 1 
HETATM 8 C C31 PNS . . . W 4 166.07 114.91 264.396 1 134.87 ? C31 PNS 1901 E 1 
HETATM 9 C C32 PNS . . . W 4 165.835 115.025 266.886 1 129.36 ? C32 PNS 1901 E 1 
HETATM 10 O O33 PNS . . . W 4 164.535 114.419 266.811 1 119.44 ? O33 PNS 1901 E 1 
HETATM 11 C C34 PNS . . . W 4 166.919 113.991 267.039 1 116.54 ? C34 PNS 1901 E 1 
HETATM 12 O O35 PNS . . . W 4 168.001 114.265 267.539 1 98.88 ? O35 PNS 1901 E 1 
HETATM 13 N N36 PNS . . . W 4 166.521 112.772 266.704 1 118.4 ? N36 PNS 1901 E 1 
HETATM 14 C C37 PNS . . . W 4 167.2 111.598 267.182 1 120.38 ? C37 PNS 1901 E 1 
HETATM 15 C C38 PNS . . . W 4 167.463 111.698 268.685 1 101.71 ? C38 PNS 1901 E 1 
HETATM 16 C C39 PNS . . . W 4 168.937 111.621 268.883 1 91.21 ? C39 PNS 1901 E 1 
HETATM 17 O O40 PNS . . . W 4 169.657 112.497 268.458 1 92.13 ? O40 PNS 1901 E 1 
HETATM 18 N N41 PNS . . . W 4 169.302 110.574 269.596 1 83.42 ? N41 PNS 1901 E 1 
HETATM 19 C C42 PNS . . . W 4 170.539 110.464 270.324 1 90.5 ? C42 PNS 1901 E 1 
HETATM 20 C C43 PNS . . . W 4 171.602 109.525 269.748 1 91.64 ? C43 PNS 1901 E 1 
HETATM 21 S S44 PNS . . . W 4 172.307 108.628 271.171 1 100 ? S44 PNS 1901 E 1 
#
_model_server_stats.io_time_ms              310 
_model_server_stats.parse_time_ms           80 
_model_server_stats.create_model_time_ms    163 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           21 
#