data_6QL5 # _model_server_result.job_id X0DFCx8N_mq9PbzAGRAqJw _model_server_result.datetime_utc '2024-11-12 23:13:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ql5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":2101}' # _entry.id 6QL5 # _exptl.entry_id 6QL5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 456.344 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QL5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QL5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octadecameric _pdbx_struct_assembly.oligomeric_count 18 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 Y N N ? 5 Z N N ? 5 AA N N ? 5 BA N N ? 5 CA N N ? 5 DA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 180 A SER 180 1_555 S P24 PNS . A PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.615 ? covale ? covale2 B OG SER 180 B SER 180 1_555 T P24 PNS . B PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.623 ? covale ? covale3 C OG SER 180 C SER 180 1_555 U P24 PNS . C PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.611 ? covale ? covale4 D OG SER 180 D SER 180 1_555 V P24 PNS . D PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.62 ? covale ? covale5 E OG SER 180 E SER 180 1_555 W P24 PNS . E PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.616 ? covale ? covale6 F OG SER 180 F SER 180 1_555 X P24 PNS . F PNS 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.615 ? # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # _atom_sites.entry_id 6QL5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code S 4 PNS A 1 1901 180 PNS PSE . T 4 PNS B 1 1901 180 PNS PSE . U 4 PNS C 1 1901 180 PNS PSE . V 4 PNS D 1 1901 180 PNS PSE . W 4 PNS E 1 1901 180 PNS PSE . X 4 PNS F 1 1901 180 PNS PSE . Y 5 FMN G 1 2101 3051 FMN FMN . Z 5 FMN H 1 2101 3051 FMN FMN . AA 5 FMN I 1 2101 3051 FMN FMN . BA 5 FMN J 1 2101 3051 FMN FMN . CA 5 FMN K 1 2101 3051 FMN FMN . DA 5 FMN L 1 2101 3051 FMN FMN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . BA 5 127.572 114.751 249.718 1 77.67 ? N1 FMN 2101 J 1 HETATM 2 C C2 FMN . . . BA 5 127.478 115.985 249.215 1 75.2 ? C2 FMN 2101 J 1 HETATM 3 O O2 FMN . . . BA 5 128.316 116.842 249.606 1 82.79 ? O2 FMN 2101 J 1 HETATM 4 N N3 FMN . . . BA 5 126.547 116.282 248.301 1 70.07 ? N3 FMN 2101 J 1 HETATM 5 C C4 FMN . . . BA 5 125.677 115.393 247.842 1 67.86 ? C4 FMN 2101 J 1 HETATM 6 O O4 FMN . . . BA 5 124.818 115.708 247.004 1 77.74 ? O4 FMN 2101 J 1 HETATM 7 C C4A FMN . . . BA 5 125.734 114.02 248.33 1 73.76 ? C4A FMN 2101 J 1 HETATM 8 N N5 FMN . . . BA 5 124.896 113.075 247.93 1 59.9 ? N5 FMN 2101 J 1 HETATM 9 C C5A FMN . . . BA 5 125.028 111.868 248.461 1 60.79 ? C5A FMN 2101 J 1 HETATM 10 C C6 FMN . . . BA 5 124.128 110.928 248.054 1 66.24 ? C6 FMN 2101 J 1 HETATM 11 C C7 FMN . . . BA 5 124.143 109.658 248.561 1 59.8 ? C7 FMN 2101 J 1 HETATM 12 C C7M FMN . . . BA 5 123.111 108.765 248.054 1 67.16 ? C7M FMN 2101 J 1 HETATM 13 C C8 FMN . . . BA 5 125.13 109.259 249.564 1 70.17 ? C8 FMN 2101 J 1 HETATM 14 C C8M FMN . . . BA 5 125.15 107.855 250.082 1 69.82 ? C8M FMN 2101 J 1 HETATM 15 C C9 FMN . . . BA 5 126.07 110.198 249.974 1 71.52 ? C9 FMN 2101 J 1 HETATM 16 C C9A FMN . . . BA 5 126.048 111.487 249.452 1 63.91 ? C9A FMN 2101 J 1 HETATM 17 N N10 FMN . . . BA 5 126.91 112.468 249.871 1 69.23 ? N10 FMN 2101 J 1 HETATM 18 C C10 FMN . . . BA 5 126.77 113.747 249.334 1 78.24 ? C10 FMN 2101 J 1 HETATM 19 C C1' FMN . . . BA 5 127.942 112.231 250.853 1 72.56 ? C1' FMN 2101 J 1 HETATM 20 C C2' FMN . . . BA 5 127.335 112.407 252.221 1 65.57 ? C2' FMN 2101 J 1 HETATM 21 O O2' FMN . . . BA 5 127.039 113.785 252.313 1 68.73 ? O2' FMN 2101 J 1 HETATM 22 C C3' FMN . . . BA 5 128.329 111.924 253.275 1 66.37 ? C3' FMN 2101 J 1 HETATM 23 O O3' FMN . . . BA 5 129.674 112.367 253.009 1 60.53 ? O3' FMN 2101 J 1 HETATM 24 C C4' FMN . . . BA 5 128.362 110.387 253.293 1 67.5 ? C4' FMN 2101 J 1 HETATM 25 O O4' FMN . . . BA 5 127.135 109.744 252.962 1 61.01 ? O4' FMN 2101 J 1 HETATM 26 C C5' FMN . . . BA 5 128.69 109.86 254.652 1 65 ? C5' FMN 2101 J 1 HETATM 27 O O5' FMN . . . BA 5 129.325 108.612 254.433 1 60.63 ? O5' FMN 2101 J 1 HETATM 28 P P FMN . . . BA 5 128.579 107.264 254.781 1 62.74 ? P FMN 2101 J 1 HETATM 29 O O1P FMN . . . BA 5 129.779 106.365 254.742 1 59.37 ? O1P FMN 2101 J 1 HETATM 30 O O2P FMN . . . BA 5 127.794 107.307 256.106 1 63.09 ? O2P FMN 2101 J 1 HETATM 31 O O3P FMN . . . BA 5 127.703 107.266 253.578 1 67.33 ? O3P FMN 2101 J 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 171 _model_server_stats.query_time_ms 469 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #