data_6QLH
#
_model_server_result.job_id            Mr6UbZi97hjg4uye1fxZLg 
_model_server_result.datetime_utc      '2024-11-17 09:52:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6qlh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    6QLH 
#
_exptl.entry_id    6QLH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6QLH 
_cell.length_a            142.124 
_cell.length_b            142.124 
_cell.length_c            142.124 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6QLH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        196 
_symmetry.space_group_name_Hall    'F 2 2 3' 
_symmetry.space_group_name_H-M     'F 2 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4,5,6,7,8,9,10,11,12 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -142.124 0 
3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
4 'crystal symmetry operation' 4_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -142.124 0 
5 'crystal symmetry operation' 17_545 z,x-1/2,y+1/2 0 0 1 1 0 0 0 1 0 0 -71.062 71.062 
6 'crystal symmetry operation' 18_544 z,-x-1/2,-y-1/2 0 0 1 -1 0 0 0 -1 0 0 -71.062 -71.062 
7 'crystal symmetry operation' 19_545 -z,-x-1/2,y+1/2 0 0 -1 -1 0 0 0 1 0 0 -71.062 71.062 
8 'crystal symmetry operation' 20_544 -z,x-1/2,-y-1/2 0 0 -1 1 0 0 0 -1 0 0 -71.062 -71.062 
9 'crystal symmetry operation' 45_545 y+1/2,z-1/2,x 0 1 0 0 0 1 1 0 0 71.062 -71.062 0 
10 'crystal symmetry operation' 46_445 -y-1/2,z-1/2,-x 0 -1 0 0 0 1 -1 0 0 -71.062 -71.062 0 
11 'crystal symmetry operation' 47_545 y+1/2,-z-1/2,-x 0 1 0 0 0 -1 -1 0 0 71.062 -71.062 0 
12 'crystal symmetry operation' 48_445 -y-1/2,-z-1/2,x 0 -1 0 0 0 -1 1 0 0 -71.062 -71.062 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 138 A ASN 117 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc2 B NA NA . A NA 301 1_555 E O HOH . A HOH 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? 
metalc ? metalc3 B NA NA . A NA 301 1_555 E O HOH . A HOH 430 18_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? 
metalc ? metalc4 B NA NA . A NA 301 1_555 E O HOH . A HOH 436 18_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? 
metalc ? metalc5 B NA NA . A NA 301 1_555 E O HOH . A HOH 481 18_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc6 B NA NA . A NA 301 1_555 E O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6QLH 
_atom_sites.fract_transf_matrix[1][1]    0.007036 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007036 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007036 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 301 1 NA NA . 
C 3 IP8 A 1 302 301 IP8 IP1 . 
D 4 FNR A 1 303 401 FNR FNR . 
E 5 HOH A 1 401 85 HOH HOH . 
E 5 HOH A 2 402 128 HOH HOH . 
E 5 HOH A 3 403 56 HOH HOH . 
E 5 HOH A 4 404 183 HOH HOH . 
E 5 HOH A 5 405 133 HOH HOH . 
E 5 HOH A 6 406 86 HOH HOH . 
E 5 HOH A 7 407 170 HOH HOH . 
E 5 HOH A 8 408 68 HOH HOH . 
E 5 HOH A 9 409 50 HOH HOH . 
E 5 HOH A 10 410 142 HOH HOH . 
E 5 HOH A 11 411 29 HOH HOH . 
E 5 HOH A 12 412 49 HOH HOH . 
E 5 HOH A 13 413 36 HOH HOH . 
E 5 HOH A 14 414 95 HOH HOH . 
E 5 HOH A 15 415 37 HOH HOH . 
E 5 HOH A 16 416 132 HOH HOH . 
E 5 HOH A 17 417 79 HOH HOH . 
E 5 HOH A 18 418 165 HOH HOH . 
E 5 HOH A 19 419 151 HOH HOH . 
E 5 HOH A 20 420 20 HOH HOH . 
E 5 HOH A 21 421 140 HOH HOH . 
E 5 HOH A 22 422 74 HOH HOH . 
E 5 HOH A 23 423 195 HOH HOH . 
E 5 HOH A 24 424 7 HOH HOH . 
E 5 HOH A 25 425 71 HOH HOH . 
E 5 HOH A 26 426 39 HOH HOH . 
E 5 HOH A 27 427 57 HOH HOH . 
E 5 HOH A 28 428 66 HOH HOH . 
E 5 HOH A 29 429 6 HOH HOH . 
E 5 HOH A 30 430 53 HOH HOH . 
E 5 HOH A 31 431 98 HOH HOH . 
E 5 HOH A 32 432 186 HOH HOH . 
E 5 HOH A 33 433 24 HOH HOH . 
E 5 HOH A 34 434 96 HOH HOH . 
E 5 HOH A 35 435 32 HOH HOH . 
E 5 HOH A 36 436 81 HOH HOH . 
E 5 HOH A 37 437 51 HOH HOH . 
E 5 HOH A 38 438 134 HOH HOH . 
E 5 HOH A 39 439 12 HOH HOH . 
E 5 HOH A 40 440 181 HOH HOH . 
E 5 HOH A 41 441 46 HOH HOH . 
E 5 HOH A 42 442 144 HOH HOH . 
E 5 HOH A 43 443 35 HOH HOH . 
E 5 HOH A 44 444 187 HOH HOH . 
E 5 HOH A 45 445 67 HOH HOH . 
E 5 HOH A 46 446 34 HOH HOH . 
E 5 HOH A 47 447 78 HOH HOH . 
E 5 HOH A 48 448 196 HOH HOH . 
E 5 HOH A 49 449 2 HOH HOH . 
E 5 HOH A 50 450 141 HOH HOH . 
E 5 HOH A 51 451 117 HOH HOH . 
E 5 HOH A 52 452 61 HOH HOH . 
E 5 HOH A 53 453 41 HOH HOH . 
E 5 HOH A 54 454 189 HOH HOH . 
E 5 HOH A 55 455 45 HOH HOH . 
E 5 HOH A 56 456 21 HOH HOH . 
E 5 HOH A 57 457 17 HOH HOH . 
E 5 HOH A 58 458 83 HOH HOH . 
E 5 HOH A 59 459 146 HOH HOH . 
E 5 HOH A 60 460 9 HOH HOH . 
E 5 HOH A 61 461 64 HOH HOH . 
E 5 HOH A 62 462 126 HOH HOH . 
E 5 HOH A 63 463 10 HOH HOH . 
E 5 HOH A 64 464 101 HOH HOH . 
E 5 HOH A 65 465 22 HOH HOH . 
E 5 HOH A 66 466 91 HOH HOH . 
E 5 HOH A 67 467 16 HOH HOH . 
E 5 HOH A 68 468 116 HOH HOH . 
E 5 HOH A 69 469 102 HOH HOH . 
E 5 HOH A 70 470 110 HOH HOH . 
E 5 HOH A 71 471 31 HOH HOH . 
E 5 HOH A 72 472 62 HOH HOH . 
E 5 HOH A 73 473 30 HOH HOH . 
E 5 HOH A 74 474 59 HOH HOH . 
E 5 HOH A 75 475 33 HOH HOH . 
E 5 HOH A 76 476 109 HOH HOH . 
E 5 HOH A 77 477 8 HOH HOH . 
E 5 HOH A 78 478 11 HOH HOH . 
E 5 HOH A 79 479 27 HOH HOH . 
E 5 HOH A 80 480 47 HOH HOH . 
E 5 HOH A 81 481 28 HOH HOH . 
E 5 HOH A 82 482 194 HOH HOH . 
E 5 HOH A 83 483 145 HOH HOH . 
E 5 HOH A 84 484 18 HOH HOH . 
E 5 HOH A 85 485 40 HOH HOH . 
E 5 HOH A 86 486 14 HOH HOH . 
E 5 HOH A 87 487 76 HOH HOH . 
E 5 HOH A 88 488 77 HOH HOH . 
E 5 HOH A 89 489 149 HOH HOH . 
E 5 HOH A 90 490 111 HOH HOH . 
E 5 HOH A 91 491 119 HOH HOH . 
E 5 HOH A 92 492 13 HOH HOH . 
E 5 HOH A 93 493 25 HOH HOH . 
E 5 HOH A 94 494 104 HOH HOH . 
E 5 HOH A 95 495 112 HOH HOH . 
E 5 HOH A 96 496 26 HOH HOH . 
E 5 HOH A 97 497 143 HOH HOH . 
E 5 HOH A 98 498 5 HOH HOH . 
E 5 HOH A 99 499 23 HOH HOH . 
E 5 HOH A 100 500 113 HOH HOH . 
E 5 HOH A 101 501 73 HOH HOH . 
E 5 HOH A 102 502 94 HOH HOH . 
E 5 HOH A 103 503 3 HOH HOH . 
E 5 HOH A 104 504 60 HOH HOH . 
E 5 HOH A 105 505 130 HOH HOH . 
E 5 HOH A 106 506 55 HOH HOH . 
E 5 HOH A 107 507 122 HOH HOH . 
E 5 HOH A 108 508 162 HOH HOH . 
E 5 HOH A 109 509 43 HOH HOH . 
E 5 HOH A 110 510 176 HOH HOH . 
E 5 HOH A 111 511 52 HOH HOH . 
E 5 HOH A 112 512 58 HOH HOH . 
E 5 HOH A 113 513 114 HOH HOH . 
E 5 HOH A 114 514 19 HOH HOH . 
E 5 HOH A 115 515 48 HOH HOH . 
E 5 HOH A 116 516 121 HOH HOH . 
E 5 HOH A 117 517 69 HOH HOH . 
E 5 HOH A 118 518 80 HOH HOH . 
E 5 HOH A 119 519 99 HOH HOH . 
E 5 HOH A 120 520 160 HOH HOH . 
E 5 HOH A 121 521 63 HOH HOH . 
E 5 HOH A 122 522 105 HOH HOH . 
E 5 HOH A 123 523 100 HOH HOH . 
E 5 HOH A 124 524 153 HOH HOH . 
E 5 HOH A 125 525 167 HOH HOH . 
E 5 HOH A 126 526 154 HOH HOH . 
E 5 HOH A 127 527 93 HOH HOH . 
E 5 HOH A 128 528 157 HOH HOH . 
E 5 HOH A 129 529 148 HOH HOH . 
E 5 HOH A 130 530 107 HOH HOH . 
E 5 HOH A 131 531 1 HOH HOH . 
E 5 HOH A 132 532 70 HOH HOH . 
E 5 HOH A 133 533 159 HOH HOH . 
E 5 HOH A 134 534 75 HOH HOH . 
E 5 HOH A 135 535 4 HOH HOH . 
E 5 HOH A 136 536 168 HOH HOH . 
E 5 HOH A 137 537 90 HOH HOH . 
E 5 HOH A 138 538 177 HOH HOH . 
E 5 HOH A 139 539 180 HOH HOH . 
E 5 HOH A 140 540 163 HOH HOH . 
E 5 HOH A 141 541 84 HOH HOH . 
E 5 HOH A 142 542 182 HOH HOH . 
E 5 HOH A 143 543 169 HOH HOH . 
E 5 HOH A 144 544 137 HOH HOH . 
E 5 HOH A 145 545 97 HOH HOH . 
E 5 HOH A 146 546 184 HOH HOH . 
E 5 HOH A 147 547 87 HOH HOH . 
E 5 HOH A 148 548 124 HOH HOH . 
E 5 HOH A 149 549 72 HOH HOH . 
E 5 HOH A 150 550 173 HOH HOH . 
E 5 HOH A 151 551 192 HOH HOH . 
E 5 HOH A 152 552 129 HOH HOH . 
E 5 HOH A 153 553 193 HOH HOH . 
E 5 HOH A 154 554 103 HOH HOH . 
E 5 HOH A 155 555 190 HOH HOH . 
E 5 HOH A 156 556 164 HOH HOH . 
E 5 HOH A 157 557 65 HOH HOH . 
E 5 HOH A 158 558 166 HOH HOH . 
E 5 HOH A 159 559 152 HOH HOH . 
E 5 HOH A 160 560 135 HOH HOH . 
E 5 HOH A 161 561 198 HOH HOH . 
E 5 HOH A 162 562 202 HOH HOH . 
E 5 HOH A 163 563 82 HOH HOH . 
E 5 HOH A 164 564 106 HOH HOH . 
E 5 HOH A 165 565 44 HOH HOH . 
E 5 HOH A 166 566 15 HOH HOH . 
E 5 HOH A 167 567 171 HOH HOH . 
E 5 HOH A 168 568 185 HOH HOH . 
E 5 HOH A 169 569 127 HOH HOH . 
E 5 HOH A 170 570 161 HOH HOH . 
E 5 HOH A 171 571 115 HOH HOH . 
E 5 HOH A 172 572 200 HOH HOH . 
E 5 HOH A 173 573 42 HOH HOH . 
E 5 HOH A 174 574 118 HOH HOH . 
E 5 HOH A 175 575 174 HOH HOH . 
E 5 HOH A 176 576 197 HOH HOH . 
E 5 HOH A 177 577 188 HOH HOH . 
E 5 HOH A 178 578 89 HOH HOH . 
E 5 HOH A 179 579 156 HOH HOH . 
E 5 HOH A 180 580 38 HOH HOH . 
E 5 HOH A 181 581 172 HOH HOH . 
E 5 HOH A 182 582 88 HOH HOH . 
E 5 HOH A 183 583 138 HOH HOH . 
E 5 HOH A 184 584 136 HOH HOH . 
E 5 HOH A 185 585 147 HOH HOH . 
E 5 HOH A 186 586 123 HOH HOH . 
E 5 HOH A 187 587 178 HOH HOH . 
E 5 HOH A 188 588 131 HOH HOH . 
E 5 HOH A 189 589 54 HOH HOH . 
E 5 HOH A 190 590 108 HOH HOH . 
E 5 HOH A 191 591 155 HOH HOH . 
E 5 HOH A 192 592 125 HOH HOH . 
E 5 HOH A 193 593 92 HOH HOH . 
E 5 HOH A 194 594 120 HOH HOH . 
E 5 HOH A 195 595 199 HOH HOH . 
E 5 HOH A 196 596 201 HOH HOH . 
E 5 HOH A 197 597 139 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -13.92 
_atom_site.Cartn_y               -57.681 
_atom_site.Cartn_z               -20.739 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        25.32 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           1 
#