data_6QLI # _model_server_result.job_id O_7aH1jk-2HC0PXHTU2QHg _model_server_result.datetime_utc '2024-11-07 05:43:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qli # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6QLI # _exptl.entry_id 6QLI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6QLI _cell.length_a 142.499 _cell.length_b 142.499 _cell.length_c 142.499 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QLI _symmetry.cell_setting ? _symmetry.Int_Tables_number 196 _symmetry.space_group_name_Hall 'F 2 2 3' _symmetry.space_group_name_H-M 'F 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -142.499 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -142.499 0 5 'crystal symmetry operation' 17_545 z,x-1/2,y+1/2 0 0 1 1 0 0 0 1 0 0 -71.2495 71.2495 6 'crystal symmetry operation' 18_544 z,-x-1/2,-y-1/2 0 0 1 -1 0 0 0 -1 0 0 -71.2495 -71.2495 7 'crystal symmetry operation' 19_545 -z,-x-1/2,y+1/2 0 0 -1 -1 0 0 0 1 0 0 -71.2495 71.2495 8 'crystal symmetry operation' 20_544 -z,x-1/2,-y-1/2 0 0 -1 1 0 0 0 -1 0 0 -71.2495 -71.2495 9 'crystal symmetry operation' 45_545 y+1/2,z-1/2,x 0 1 0 0 0 1 1 0 0 71.2495 -71.2495 0 10 'crystal symmetry operation' 46_445 -y-1/2,z-1/2,-x 0 -1 0 0 0 1 -1 0 0 -71.2495 -71.2495 0 11 'crystal symmetry operation' 47_545 y+1/2,-z-1/2,-x 0 1 0 0 0 -1 -1 0 0 71.2495 -71.2495 0 12 'crystal symmetry operation' 48_445 -y-1/2,-z-1/2,x 0 -1 0 0 0 -1 1 0 0 -71.2495 -71.2495 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 138 A ASN 117 1_555 D NA NA . A NA 303 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc2 A OD1 ASN 138 A ASN 117 1_555 D NA NA . A NA 303 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc3 D NA NA . A NA 303 1_555 E O HOH . A HOH 412 18_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? metalc ? metalc4 D NA NA . A NA 303 1_555 E O HOH . A HOH 415 18_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc5 D NA NA . A NA 303 1_555 E O HOH . A HOH 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc6 D NA NA . A NA 303 1_555 E O HOH . A HOH 459 18_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc7 D NA NA . A NA 303 1_555 E O HOH . A HOH 463 18_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6QLI _atom_sites.fract_transf_matrix[1][1] 0.007018 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007018 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007018 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4LR A 1 301 301 4LR 4LR . C 3 FNR A 1 302 401 FNR FNR . D 4 NA A 1 303 1 NA NA . E 5 HOH A 1 401 156 HOH HOH . E 5 HOH A 2 402 16 HOH HOH . E 5 HOH A 3 403 129 HOH HOH . E 5 HOH A 4 404 131 HOH HOH . E 5 HOH A 5 405 60 HOH HOH . E 5 HOH A 6 406 17 HOH HOH . E 5 HOH A 7 407 62 HOH HOH . E 5 HOH A 8 408 74 HOH HOH . E 5 HOH A 9 409 4 HOH HOH . E 5 HOH A 10 410 91 HOH HOH . E 5 HOH A 11 411 153 HOH HOH . E 5 HOH A 12 412 78 HOH HOH . E 5 HOH A 13 413 46 HOH HOH . E 5 HOH A 14 414 45 HOH HOH . E 5 HOH A 15 415 53 HOH HOH . E 5 HOH A 16 416 93 HOH HOH . E 5 HOH A 17 417 19 HOH HOH . E 5 HOH A 18 418 138 HOH HOH . E 5 HOH A 19 419 14 HOH HOH . E 5 HOH A 20 420 59 HOH HOH . E 5 HOH A 21 421 44 HOH HOH . E 5 HOH A 22 422 77 HOH HOH . E 5 HOH A 23 423 85 HOH HOH . E 5 HOH A 24 424 162 HOH HOH . E 5 HOH A 25 425 23 HOH HOH . E 5 HOH A 26 426 141 HOH HOH . E 5 HOH A 27 427 132 HOH HOH . E 5 HOH A 28 428 37 HOH HOH . E 5 HOH A 29 429 97 HOH HOH . E 5 HOH A 30 430 33 HOH HOH . E 5 HOH A 31 431 164 HOH HOH . E 5 HOH A 32 432 29 HOH HOH . E 5 HOH A 33 433 51 HOH HOH . E 5 HOH A 34 434 35 HOH HOH . E 5 HOH A 35 435 108 HOH HOH . E 5 HOH A 36 436 52 HOH HOH . E 5 HOH A 37 437 47 HOH HOH . E 5 HOH A 38 438 38 HOH HOH . E 5 HOH A 39 439 69 HOH HOH . E 5 HOH A 40 440 26 HOH HOH . E 5 HOH A 41 441 99 HOH HOH . E 5 HOH A 42 442 12 HOH HOH . E 5 HOH A 43 443 5 HOH HOH . E 5 HOH A 44 444 88 HOH HOH . E 5 HOH A 45 445 125 HOH HOH . E 5 HOH A 46 446 6 HOH HOH . E 5 HOH A 47 447 24 HOH HOH . E 5 HOH A 48 448 101 HOH HOH . E 5 HOH A 49 449 43 HOH HOH . E 5 HOH A 50 450 41 HOH HOH . E 5 HOH A 51 451 34 HOH HOH . E 5 HOH A 52 452 48 HOH HOH . E 5 HOH A 53 453 65 HOH HOH . E 5 HOH A 54 454 22 HOH HOH . E 5 HOH A 55 455 55 HOH HOH . E 5 HOH A 56 456 72 HOH HOH . E 5 HOH A 57 457 106 HOH HOH . E 5 HOH A 58 458 2 HOH HOH . E 5 HOH A 59 459 71 HOH HOH . E 5 HOH A 60 460 75 HOH HOH . E 5 HOH A 61 461 7 HOH HOH . E 5 HOH A 62 462 25 HOH HOH . E 5 HOH A 63 463 116 HOH HOH . E 5 HOH A 64 464 1 HOH HOH . E 5 HOH A 65 465 49 HOH HOH . E 5 HOH A 66 466 8 HOH HOH . E 5 HOH A 67 467 11 HOH HOH . E 5 HOH A 68 468 21 HOH HOH . E 5 HOH A 69 469 61 HOH HOH . E 5 HOH A 70 470 20 HOH HOH . E 5 HOH A 71 471 86 HOH HOH . E 5 HOH A 72 472 56 HOH HOH . E 5 HOH A 73 473 67 HOH HOH . E 5 HOH A 74 474 90 HOH HOH . E 5 HOH A 75 475 36 HOH HOH . E 5 HOH A 76 476 3 HOH HOH . E 5 HOH A 77 477 84 HOH HOH . E 5 HOH A 78 478 111 HOH HOH . E 5 HOH A 79 479 30 HOH HOH . E 5 HOH A 80 480 73 HOH HOH . E 5 HOH A 81 481 89 HOH HOH . E 5 HOH A 82 482 31 HOH HOH . E 5 HOH A 83 483 18 HOH HOH . E 5 HOH A 84 484 117 HOH HOH . E 5 HOH A 85 485 79 HOH HOH . E 5 HOH A 86 486 94 HOH HOH . E 5 HOH A 87 487 81 HOH HOH . E 5 HOH A 88 488 13 HOH HOH . E 5 HOH A 89 489 82 HOH HOH . E 5 HOH A 90 490 10 HOH HOH . E 5 HOH A 91 491 122 HOH HOH . E 5 HOH A 92 492 76 HOH HOH . E 5 HOH A 93 493 139 HOH HOH . E 5 HOH A 94 494 54 HOH HOH . E 5 HOH A 95 495 146 HOH HOH . E 5 HOH A 96 496 124 HOH HOH . E 5 HOH A 97 497 113 HOH HOH . E 5 HOH A 98 498 103 HOH HOH . E 5 HOH A 99 499 102 HOH HOH . E 5 HOH A 100 500 95 HOH HOH . E 5 HOH A 101 501 143 HOH HOH . E 5 HOH A 102 502 50 HOH HOH . E 5 HOH A 103 503 15 HOH HOH . E 5 HOH A 104 504 107 HOH HOH . E 5 HOH A 105 505 134 HOH HOH . E 5 HOH A 106 506 112 HOH HOH . E 5 HOH A 107 507 66 HOH HOH . E 5 HOH A 108 508 64 HOH HOH . E 5 HOH A 109 509 144 HOH HOH . E 5 HOH A 110 510 87 HOH HOH . E 5 HOH A 111 511 104 HOH HOH . E 5 HOH A 112 512 120 HOH HOH . E 5 HOH A 113 513 142 HOH HOH . E 5 HOH A 114 514 123 HOH HOH . E 5 HOH A 115 515 160 HOH HOH . E 5 HOH A 116 516 115 HOH HOH . E 5 HOH A 117 517 159 HOH HOH . E 5 HOH A 118 518 133 HOH HOH . E 5 HOH A 119 519 163 HOH HOH . E 5 HOH A 120 520 68 HOH HOH . E 5 HOH A 121 521 40 HOH HOH . E 5 HOH A 122 522 9 HOH HOH . E 5 HOH A 123 523 145 HOH HOH . E 5 HOH A 124 524 155 HOH HOH . E 5 HOH A 125 525 100 HOH HOH . E 5 HOH A 126 526 32 HOH HOH . E 5 HOH A 127 527 130 HOH HOH . E 5 HOH A 128 528 140 HOH HOH . E 5 HOH A 129 529 39 HOH HOH . E 5 HOH A 130 530 154 HOH HOH . E 5 HOH A 131 531 128 HOH HOH . E 5 HOH A 132 532 148 HOH HOH . E 5 HOH A 133 533 98 HOH HOH . E 5 HOH A 134 534 58 HOH HOH . E 5 HOH A 135 535 118 HOH HOH . E 5 HOH A 136 536 42 HOH HOH . E 5 HOH A 137 537 127 HOH HOH . E 5 HOH A 138 538 28 HOH HOH . E 5 HOH A 139 539 151 HOH HOH . E 5 HOH A 140 540 109 HOH HOH . E 5 HOH A 141 541 27 HOH HOH . E 5 HOH A 142 542 70 HOH HOH . E 5 HOH A 143 543 149 HOH HOH . E 5 HOH A 144 544 158 HOH HOH . E 5 HOH A 145 545 80 HOH HOH . E 5 HOH A 146 546 83 HOH HOH . E 5 HOH A 147 547 136 HOH HOH . E 5 HOH A 148 548 63 HOH HOH . E 5 HOH A 149 549 114 HOH HOH . E 5 HOH A 150 550 110 HOH HOH . E 5 HOH A 151 551 150 HOH HOH . E 5 HOH A 152 552 137 HOH HOH . E 5 HOH A 153 553 92 HOH HOH . E 5 HOH A 154 554 96 HOH HOH . E 5 HOH A 155 555 119 HOH HOH . E 5 HOH A 156 556 126 HOH HOH . E 5 HOH A 157 557 157 HOH HOH . E 5 HOH A 158 558 121 HOH HOH . E 5 HOH A 159 559 147 HOH HOH . E 5 HOH A 160 560 152 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -13.649 _atom_site.Cartn_y -57.84 _atom_site.Cartn_z -20.755 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.12 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #