data_6QMF # _model_server_result.job_id lUvQ2TESAI9mVLLq33OcLA _model_server_result.datetime_utc '2024-11-28 23:03:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qmf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6QMF # _exptl.entry_id 6QMF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.211 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-indol-1-ylpropanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6QMF _cell.length_a 97.951 _cell.length_b 97.951 _cell.length_c 112.729 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QMF _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_675 -y+1,x-y+2,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 169.656109 0 3 'crystal symmetry operation' 3_465 -x+y-1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -146.9265 84.828054 0 4 'crystal symmetry operation' 4_465 y-1,x+1,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 -146.9265 84.828054 0 5 'crystal symmetry operation' 5_675 x-y+1,-y+2,-z 1 0 0 0 -1 0 0 0 -1 0 169.656109 0 6 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H11 N O2' _chem_comp.formula_weight 189.211 _chem_comp.id EQ5 _chem_comp.mon_nstd_flag . _chem_comp.name '3-indol-1-ylpropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C05 C04 EQ5 doub 92 n y C05 C06 EQ5 sing 93 n y C04 C03 EQ5 sing 94 n y C06 C01 EQ5 doub 95 n y C03 C07 EQ5 sing 96 n y C03 C02 EQ5 doub 97 n y C07 C08 EQ5 doub 98 n y C01 C02 EQ5 sing 99 n y C02 N09 EQ5 sing 100 n y C08 N09 EQ5 sing 101 n y N09 C10 EQ5 sing 102 n n C10 C11 EQ5 sing 103 n n C11 C12 EQ5 sing 104 n n C12 O13 EQ5 doub 105 n n C12 O14 EQ5 sing 106 n n C10 H101 EQ5 sing 107 n n C10 H102 EQ5 sing 108 n n C01 H011 EQ5 sing 109 n n C04 H041 EQ5 sing 110 n n C05 H051 EQ5 sing 111 n n C06 H061 EQ5 sing 112 n n C07 H071 EQ5 sing 113 n n C08 H081 EQ5 sing 114 n n C11 H112 EQ5 sing 115 n n C11 H111 EQ5 sing 116 n n O14 H1 EQ5 sing 117 n n # _atom_sites.entry_id 6QMF _atom_sites.fract_transf_matrix[1][1] 0.010209 _atom_sites.fract_transf_matrix[1][2] 0.005894 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011789 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008871 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EQ5 A 1 201 1 EQ5 LIG . C 3 DMS A 1 202 1 DMS DMS . D 4 HOH A 1 301 24 HOH HOH . D 4 HOH A 2 302 21 HOH HOH . D 4 HOH A 3 303 22 HOH HOH . D 4 HOH A 4 304 16 HOH HOH . D 4 HOH A 5 305 13 HOH HOH . D 4 HOH A 6 306 2 HOH HOH . D 4 HOH A 7 307 4 HOH HOH . D 4 HOH A 8 308 10 HOH HOH . D 4 HOH A 9 309 29 HOH HOH . D 4 HOH A 10 310 9 HOH HOH . D 4 HOH A 11 311 39 HOH HOH . D 4 HOH A 12 312 17 HOH HOH . D 4 HOH A 13 313 11 HOH HOH . D 4 HOH A 14 314 30 HOH HOH . D 4 HOH A 15 315 26 HOH HOH . D 4 HOH A 16 316 7 HOH HOH . D 4 HOH A 17 317 6 HOH HOH . D 4 HOH A 18 318 1 HOH HOH . D 4 HOH A 19 319 23 HOH HOH . D 4 HOH A 20 320 12 HOH HOH . D 4 HOH A 21 321 18 HOH HOH . D 4 HOH A 22 322 27 HOH HOH . D 4 HOH A 23 323 31 HOH HOH . D 4 HOH A 24 324 32 HOH HOH . D 4 HOH A 25 325 14 HOH HOH . D 4 HOH A 26 326 36 HOH HOH . D 4 HOH A 27 327 20 HOH HOH . D 4 HOH A 28 328 3 HOH HOH . D 4 HOH A 29 329 37 HOH HOH . D 4 HOH A 30 330 15 HOH HOH . D 4 HOH A 31 331 35 HOH HOH . D 4 HOH A 32 332 28 HOH HOH . D 4 HOH A 33 333 33 HOH HOH . D 4 HOH A 34 334 19 HOH HOH . D 4 HOH A 35 335 5 HOH HOH . D 4 HOH A 36 336 34 HOH HOH . D 4 HOH A 37 337 8 HOH HOH . D 4 HOH A 38 338 25 HOH HOH . D 4 HOH A 39 339 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 EQ5 . . . B 2 -34.102 80.775 11.887 1 72.28 ? C10 EQ5 201 A 1 HETATM 2 C C01 EQ5 . . . B 2 -34.947 78.486 9.895 1 60.81 ? C01 EQ5 201 A 1 HETATM 3 C C02 EQ5 . . . B 2 -33.685 79.034 10.126 1 63.3 ? C02 EQ5 201 A 1 HETATM 4 C C03 EQ5 . . . B 2 -32.595 78.541 9.423 1 58.53 ? C03 EQ5 201 A 1 HETATM 5 C C04 EQ5 . . . B 2 -32.775 77.519 8.498 1 60.79 ? C04 EQ5 201 A 1 HETATM 6 C C05 EQ5 . . . B 2 -34.041 76.982 8.27 1 61.63 ? C05 EQ5 201 A 1 HETATM 7 C C06 EQ5 . . . B 2 -35.126 77.468 8.974 1 61.07 ? C06 EQ5 201 A 1 HETATM 8 C C07 EQ5 . . . B 2 -31.484 79.267 9.863 1 60.08 ? C07 EQ5 201 A 1 HETATM 9 C C08 EQ5 . . . B 2 -31.946 80.164 10.816 1 59.35 ? C08 EQ5 201 A 1 HETATM 10 N N09 EQ5 . . . B 2 -33.269 80.006 10.965 1 64.89 ? N09 EQ5 201 A 1 HETATM 11 C C11 EQ5 . . . B 2 -34.859 79.846 12.819 1 76.48 ? C11 EQ5 201 A 1 HETATM 12 C C12 EQ5 . . . B 2 -34.609 80.136 14.28 1 81.14 ? C12 EQ5 201 A 1 HETATM 13 O O13 EQ5 . . . B 2 -35.145 81.127 14.839 1 83.17 ? O13 EQ5 201 A 1 HETATM 14 O O14 EQ5 . . . B 2 -33.871 79.362 14.958 1 83.64 -1 O14 EQ5 201 A 1 HETATM 15 H H101 EQ5 . . . B 2 -34.755 81.283 11.373 1 86.74 ? H101 EQ5 201 A 1 HETATM 16 H H102 EQ5 . . . B 2 -33.544 81.399 12.405 1 86.74 ? H102 EQ5 201 A 1 HETATM 17 H H011 EQ5 . . . B 2 -35.711 78.82 10.387 1 72.97 ? H011 EQ5 201 A 1 HETATM 18 H H041 EQ5 . . . B 2 -32.013 77.181 8.002 1 72.95 ? H041 EQ5 201 A 1 HETATM 19 H H051 EQ5 . . . B 2 -34.159 76.273 7.622 1 73.95 ? H051 EQ5 201 A 1 HETATM 20 H H061 EQ5 . . . B 2 -36.008 77.101 8.822 1 73.28 ? H061 EQ5 201 A 1 HETATM 21 H H071 EQ5 . . . B 2 -30.564 79.165 9.559 1 72.09 ? H071 EQ5 201 A 1 HETATM 22 H H081 EQ5 . . . B 2 -31.4 80.801 11.299 1 71.22 ? H081 EQ5 201 A 1 HETATM 23 H H112 EQ5 . . . B 2 -34.595 78.925 12.632 1 91.77 ? H112 EQ5 201 A 1 HETATM 24 H H111 EQ5 . . . B 2 -35.795 79.939 12.644 1 91.77 ? H111 EQ5 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #