data_6QMH # _model_server_result.job_id ixaVKpvw_KrNFJXjUV-Eng _model_server_result.datetime_utc '2024-12-01 23:53:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6qmh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6QMH # _exptl.entry_id 6QMH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 361.394 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[3-(1~{H}-indol-3-yl)propoxy]-1-phenyl-pyrazole-4-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6QMH _cell.length_a 98.964 _cell.length_b 98.964 _cell.length_c 115.51 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6QMH _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 49.482 85.705338 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -49.482 85.705338 0 4 'crystal symmetry operation' 10_455 y-1/3,x+1/3,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 -49.482 28.568446 38.503333 5 'crystal symmetry operation' 11_565 x-y+2/3,-y+4/3,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 114.273784 38.503333 6 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 49.482 28.568446 38.503333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H19 N3 O3' _chem_comp.formula_weight 361.394 _chem_comp.id EP8 _chem_comp.mon_nstd_flag . _chem_comp.name '5-[3-(1~{H}-indol-3-yl)propoxy]-1-phenyl-pyrazole-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O26 C25 EP8 doub 83 n n C25 O27 EP8 sing 84 n n C25 C15 EP8 sing 85 n n C16 C15 EP8 sing 86 n y C16 N17 EP8 doub 87 n y C15 C14 EP8 doub 88 n y N17 N18 EP8 sing 89 n y N07 C08 EP8 sing 90 n y N07 C04 EP8 sing 91 n y C08 C09 EP8 doub 92 n y C14 N18 EP8 sing 93 n y C14 O13 EP8 sing 94 n n C04 C05 EP8 doub 95 n y C04 C03 EP8 sing 96 n y C05 C06 EP8 sing 97 n y N18 C19 EP8 sing 98 n n C09 C03 EP8 sing 99 n y C09 C10 EP8 sing 100 n n C12 O13 EP8 sing 101 n n C12 C11 EP8 sing 102 n n C03 C02 EP8 doub 103 n y C06 C01 EP8 doub 104 n y C10 C11 EP8 sing 105 n n C19 C24 EP8 doub 106 n y C19 C20 EP8 sing 107 n y C02 C01 EP8 sing 108 n y C24 C23 EP8 sing 109 n y C20 C21 EP8 doub 110 n y C23 C22 EP8 doub 111 n y C21 C22 EP8 sing 112 n y C10 H101 EP8 sing 113 n n C10 H102 EP8 sing 114 n n C20 H201 EP8 sing 115 n n C21 H211 EP8 sing 116 n n C22 H221 EP8 sing 117 n n C24 H241 EP8 sing 118 n n C01 H011 EP8 sing 119 n n C02 H021 EP8 sing 120 n n C05 H051 EP8 sing 121 n n C06 H061 EP8 sing 122 n n N07 H1 EP8 sing 123 n n C08 H081 EP8 sing 124 n n C11 H111 EP8 sing 125 n n C11 H112 EP8 sing 126 n n C12 H121 EP8 sing 127 n n C12 H122 EP8 sing 128 n n C16 H161 EP8 sing 129 n n C23 H231 EP8 sing 130 n n O27 H2 EP8 sing 131 n n # _atom_sites.entry_id 6QMH _atom_sites.fract_transf_matrix[1][1] 0.010105 _atom_sites.fract_transf_matrix[1][2] 0.005834 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011668 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008657 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EP8 A 1 201 1 EP8 LIG . C 3 HOH A 1 301 54 HOH HOH . C 3 HOH A 2 302 71 HOH HOH . C 3 HOH A 3 303 51 HOH HOH . C 3 HOH A 4 304 49 HOH HOH . C 3 HOH A 5 305 94 HOH HOH . C 3 HOH A 6 306 44 HOH HOH . C 3 HOH A 7 307 60 HOH HOH . C 3 HOH A 8 308 20 HOH HOH . C 3 HOH A 9 309 67 HOH HOH . C 3 HOH A 10 310 15 HOH HOH . C 3 HOH A 11 311 38 HOH HOH . C 3 HOH A 12 312 85 HOH HOH . C 3 HOH A 13 313 45 HOH HOH . C 3 HOH A 14 314 50 HOH HOH . C 3 HOH A 15 315 26 HOH HOH . C 3 HOH A 16 316 25 HOH HOH . C 3 HOH A 17 317 95 HOH HOH . C 3 HOH A 18 318 30 HOH HOH . C 3 HOH A 19 319 32 HOH HOH . C 3 HOH A 20 320 76 HOH HOH . C 3 HOH A 21 321 40 HOH HOH . C 3 HOH A 22 322 74 HOH HOH . C 3 HOH A 23 323 23 HOH HOH . C 3 HOH A 24 324 17 HOH HOH . C 3 HOH A 25 325 89 HOH HOH . C 3 HOH A 26 326 2 HOH HOH . C 3 HOH A 27 327 37 HOH HOH . C 3 HOH A 28 328 48 HOH HOH . C 3 HOH A 29 329 7 HOH HOH . C 3 HOH A 30 330 9 HOH HOH . C 3 HOH A 31 331 21 HOH HOH . C 3 HOH A 32 332 12 HOH HOH . C 3 HOH A 33 333 4 HOH HOH . C 3 HOH A 34 334 29 HOH HOH . C 3 HOH A 35 335 52 HOH HOH . C 3 HOH A 36 336 79 HOH HOH . C 3 HOH A 37 337 57 HOH HOH . C 3 HOH A 38 338 18 HOH HOH . C 3 HOH A 39 339 3 HOH HOH . C 3 HOH A 40 340 80 HOH HOH . C 3 HOH A 41 341 19 HOH HOH . C 3 HOH A 42 342 56 HOH HOH . C 3 HOH A 43 343 55 HOH HOH . C 3 HOH A 44 344 86 HOH HOH . C 3 HOH A 45 345 84 HOH HOH . C 3 HOH A 46 346 31 HOH HOH . C 3 HOH A 47 347 88 HOH HOH . C 3 HOH A 48 348 27 HOH HOH . C 3 HOH A 49 349 13 HOH HOH . C 3 HOH A 50 350 14 HOH HOH . C 3 HOH A 51 351 11 HOH HOH . C 3 HOH A 52 352 41 HOH HOH . C 3 HOH A 53 353 65 HOH HOH . C 3 HOH A 54 354 68 HOH HOH . C 3 HOH A 55 355 61 HOH HOH . C 3 HOH A 56 356 34 HOH HOH . C 3 HOH A 57 357 59 HOH HOH . C 3 HOH A 58 358 8 HOH HOH . C 3 HOH A 59 359 62 HOH HOH . C 3 HOH A 60 360 24 HOH HOH . C 3 HOH A 61 361 53 HOH HOH . C 3 HOH A 62 362 28 HOH HOH . C 3 HOH A 63 363 78 HOH HOH . C 3 HOH A 64 364 16 HOH HOH . C 3 HOH A 65 365 91 HOH HOH . C 3 HOH A 66 366 96 HOH HOH . C 3 HOH A 67 367 10 HOH HOH . C 3 HOH A 68 368 36 HOH HOH . C 3 HOH A 69 369 42 HOH HOH . C 3 HOH A 70 370 5 HOH HOH . C 3 HOH A 71 371 46 HOH HOH . C 3 HOH A 72 372 47 HOH HOH . C 3 HOH A 73 373 22 HOH HOH . C 3 HOH A 74 374 66 HOH HOH . C 3 HOH A 75 375 64 HOH HOH . C 3 HOH A 76 376 39 HOH HOH . C 3 HOH A 77 377 43 HOH HOH . C 3 HOH A 78 378 81 HOH HOH . C 3 HOH A 79 379 58 HOH HOH . C 3 HOH A 80 380 82 HOH HOH . C 3 HOH A 81 381 77 HOH HOH . C 3 HOH A 82 382 75 HOH HOH . C 3 HOH A 83 383 93 HOH HOH . C 3 HOH A 84 384 69 HOH HOH . C 3 HOH A 85 385 97 HOH HOH . C 3 HOH A 86 386 33 HOH HOH . C 3 HOH A 87 387 83 HOH HOH . C 3 HOH A 88 388 90 HOH HOH . C 3 HOH A 89 389 1 HOH HOH . C 3 HOH A 90 390 73 HOH HOH . C 3 HOH A 91 391 72 HOH HOH . C 3 HOH A 92 392 87 HOH HOH . C 3 HOH A 93 393 6 HOH HOH . C 3 HOH A 94 394 63 HOH HOH . C 3 HOH A 95 395 92 HOH HOH . C 3 HOH A 96 396 35 HOH HOH . C 3 HOH A 97 397 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 EP8 . . . B 2 -2.978 43.323 9.634 1 30.9 ? C10 EP8 201 A 1 HETATM 2 C C15 EP8 . . . B 2 1.591 42.326 6.876 1 23.76 ? C15 EP8 201 A 1 HETATM 3 C C20 EP8 . . . B 2 2.899 40.783 10.92 1 17.95 ? C20 EP8 201 A 1 HETATM 4 C C21 EP8 . . . B 2 2.788 40.35 12.247 1 20.84 ? C21 EP8 201 A 1 HETATM 5 C C22 EP8 . . . B 2 1.66 39.671 12.682 1 17.2 ? C22 EP8 201 A 1 HETATM 6 C C24 EP8 . . . B 2 0.731 39.851 10.465 1 20.35 ? C24 EP8 201 A 1 HETATM 7 C C01 EP8 . . . B 2 -3.435 38.547 10.129 1 29.95 ? C01 EP8 201 A 1 HETATM 8 C C02 EP8 . . . B 2 -3.174 39.927 10.125 1 23.72 ? C02 EP8 201 A 1 HETATM 9 C C03 EP8 . . . B 2 -3.846 40.782 9.235 1 29.27 ? C03 EP8 201 A 1 HETATM 10 C C04 EP8 . . . B 2 -4.772 40.234 8.362 1 28.74 ? C04 EP8 201 A 1 HETATM 11 C C05 EP8 . . . B 2 -5.031 38.845 8.375 1 25.78 ? C05 EP8 201 A 1 HETATM 12 C C06 EP8 . . . B 2 -4.36 38.008 9.263 1 25.39 ? C06 EP8 201 A 1 HETATM 13 N N07 EP8 . . . B 2 -5.279 41.22 7.613 1 32.8 ? N07 EP8 201 A 1 HETATM 14 C C08 EP8 . . . B 2 -4.743 42.374 7.94 1 33.21 ? C08 EP8 201 A 1 HETATM 15 C C09 EP8 . . . B 2 -3.815 42.191 8.968 1 28.29 ? C09 EP8 201 A 1 HETATM 16 C C11 EP8 . . . B 2 -1.556 42.915 10.034 1 32.47 ? C11 EP8 201 A 1 HETATM 17 C C12 EP8 . . . B 2 -0.557 43.526 8.995 1 32.45 ? C12 EP8 201 A 1 HETATM 18 O O13 EP8 . . . B 2 0.774 43.07 9.243 1 29.13 ? O13 EP8 201 A 1 HETATM 19 C C14 EP8 . . . B 2 1.391 42.164 8.289 1 26.63 ? C14 EP8 201 A 1 HETATM 20 C C16 EP8 . . . B 2 2.273 41.135 6.486 1 23.35 ? C16 EP8 201 A 1 HETATM 21 N N17 EP8 . . . B 2 2.436 40.373 7.593 1 20.83 ? N17 EP8 201 A 1 HETATM 22 N N18 EP8 . . . B 2 1.919 40.985 8.637 1 22.67 ? N18 EP8 201 A 1 HETATM 23 C C19 EP8 . . . B 2 1.866 40.527 10.028 1 17.19 ? C19 EP8 201 A 1 HETATM 24 C C23 EP8 . . . B 2 0.635 39.423 11.79 1 22.64 ? C23 EP8 201 A 1 HETATM 25 C C25 EP8 . . . B 2 1.202 43.512 5.982 1 32.87 ? C25 EP8 201 A 1 HETATM 26 O O26 EP8 . . . B 2 1.613 43.524 4.77 1 26.75 -1 O26 EP8 201 A 1 HETATM 27 O O27 EP8 . . . B 2 0.517 44.463 6.454 1 34.8 ? O27 EP8 201 A 1 HETATM 28 H H101 EP8 . . . B 2 -3.45 43.625 10.433 1 37.08 ? H101 EP8 201 A 1 HETATM 29 H H102 EP8 . . . B 2 -2.918 44.077 9.002 1 37.08 ? H102 EP8 201 A 1 HETATM 30 H H201 EP8 . . . B 2 3.697 41.267 10.624 1 21.54 ? H201 EP8 201 A 1 HETATM 31 H H211 EP8 . . . B 2 3.524 40.525 12.878 1 25.01 ? H211 EP8 201 A 1 HETATM 32 H H221 EP8 . . . B 2 1.593 39.361 13.616 1 20.64 ? H221 EP8 201 A 1 HETATM 33 H H241 EP8 . . . B 2 -0.007 39.676 9.839 1 24.42 ? H241 EP8 201 A 1 HETATM 34 H H011 EP8 . . . B 2 -2.965 37.968 10.756 1 35.94 ? H011 EP8 201 A 1 HETATM 35 H H021 EP8 . . . B 2 -2.511 40.3 10.754 1 28.46 ? H021 EP8 201 A 1 HETATM 36 H H051 EP8 . . . B 2 -5.699 38.461 7.74 1 30.94 ? H051 EP8 201 A 1 HETATM 37 H H061 EP8 . . . B 2 -4.54 37.05 9.269 1 30.47 ? H061 EP8 201 A 1 HETATM 38 H H081 EP8 . . . B 2 -4.965 43.235 7.53 1 39.85 ? H081 EP8 201 A 1 HETATM 39 H H111 EP8 . . . B 2 -1.352 43.257 10.931 1 38.96 ? H111 EP8 201 A 1 HETATM 40 H H112 EP8 . . . B 2 -1.48 41.945 10.027 1 38.96 ? H112 EP8 201 A 1 HETATM 41 H H121 EP8 . . . B 2 -0.831 43.257 8.071 1 38.94 ? H121 EP8 201 A 1 HETATM 42 H H122 EP8 . . . B 2 -0.58 44.502 9.065 1 38.94 ? H122 EP8 201 A 1 HETATM 43 H H161 EP8 . . . B 2 2.568 40.903 5.568 1 28.02 ? H161 EP8 201 A 1 HETATM 44 H H231 EP8 . . . B 2 -0.17 38.939 12.09 1 27.17 ? H231 EP8 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #